| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85857938
Identifier: 85857938
GI number: 85857938
Start: 93771
End: 94826
Strand: Direct
Name: 85857938
Synonym: SYN_00147
Alternate gene names: NA
Gene position: 93771-94826 (Clockwise)
Preceding gene: 85857937
Following gene: 85857939
Centisome position: 2.95
GC content: 55.68
Gene sequence:
>1056_bases GTGAAGGCGGAAGAGTATTATAAGGGATACCTTGTCAACCCTGAACTGTTAGCCAAAGACCCGCATCTTTCCAAGGGATG CGAAACCTGCCACAAGGGCGACAAAAGCGGTGAAACGAAAGAGCAGGCCCACGAGGGCATGGTGAAGCGGCCATCGGACA ATCTCAAGACCTGCGGCCAATGCCACGGAAAGATCGCCGCCGCCTATGGGAAATCTCTTCATTACACAACGATCGGCCAG CGGCAGGGGGTCATGGCAAGGTTTTCCAAGGCGGAACTCAAGATCTTCGACAAGCGCGTCTTCGAACAATCCTGCCGGAG CTGCCACGCCTCCTGCGGTGGATGTCATGTGAAATCACCACCGGTATCCGGGATCAGCCTCGGCCTGATCCAGGGGCATA AATTTGTCAGGAAGGATGAAGGCAAGACCTGCGCCTTTTGCCATGGCGGACGTGTCTATCCGGAATATGTGGGCGAATAC GGCGGGGCAACGGATGTCCACTACCAGAAAGGAATGATGTGCCTTGACTGCCACAAGAAACGGGAATTCCACGGCGACGG AAAGAAATATCTCACCAAGCAGGCGGTGAAAGACCGTCCCGCCTGCACGAACTGCCACAAGACGATCAACTCGAAGACAC TGCTGACAAAGAAGGCCCACAGCGTTCACCGGGGCAAGGTGAGCTGCTACGGCTGCCACTCGGGCGGCCAGTATCGGAAC TGTTATGACTGCCATGAAGGGACGGGTGCTAAGGCGGAGCCAGGTTTTATCCTGGGGAAAAACCCCCGGAACACGAAGGA GGTCACAACACTGCGTGTTATCCCGACTGTCCGGAATTCCTTTGAGAAGGTGGGAATCCGCATGGAGAAATTCGATGCCC TCCCCAATTACTGGAATTCGCCGGTCCACAATATCCGGAAGCGTACGGACCGGACTCGCTCCTGCGATTCATGTCATACG GATCGCACCGGGTTCCTGACGTGGGAAACCCTCCTGAAAGGAGGAGCCAAGGCGAATGAACGGCTGATCCACACTCCAAA ACCCATAACCCGATAA
Upstream 100 bases:
>100_bases GTGCATTTCCTGCCATACAGATGATCAAAAGATGAAGTCCCTGGTCAAACCACCGGCTATCGGCGGCGAAGGCGAGGGGT GAGCGGGGGCGCCTCCGCCC
Downstream 100 bases:
>100_bases ACGGTATTACAATGATCAAACGGGGTAAGGTATCCCGGCAAATTCCCACTCCTGTTAAATACAAAAGTCTGAAGGAAAGA GGCGGTCATGGATGCAGTTC
Product: cytoplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT DRTGFLTWETLLKGGAKANERLIHTPKPITR
Sequences:
>Translated_351_residues MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT DRTGFLTWETLLKGGAKANERLIHTPKPITR >Mature_351_residues MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQCHGKIAAAYGKSLHYTTIGQ RQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSPPVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEY GGATDVHYQKGMMCLDCHKKREFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNSPVHNIRKRTDRTRSCDSCHT DRTGFLTWETLLKGGAKANERLIHTPKPITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39242; Mature: 39242
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQ CCCCHHHCCEECCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH CHGKIAAAYGKSLHYTTIGQRQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSP HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEYGGATDVHYQKGMMCLDCHKK CCCCEEEEHHHCCHHHCCCCCCEEEEECCCEECHHHHHCCCCCCCCHHHCCCEEEEHHHH REFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNS CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCC PVHNIRKRTDRTRSCDSCHTDRTGFLTWETLLKGGAKANERLIHTPKPITR HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCEEECCCCCCC >Mature Secondary Structure MKAEEYYKGYLVNPELLAKDPHLSKGCETCHKGDKSGETKEQAHEGMVKRPSDNLKTCGQ CCCCHHHCCEECCHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHH CHGKIAAAYGKSLHYTTIGQRQGVMARFSKAELKIFDKRVFEQSCRSCHASCGGCHVKSP HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVSGISLGLIQGHKFVRKDEGKTCAFCHGGRVYPEYVGEYGGATDVHYQKGMMCLDCHKK CCCCEEEEHHHCCHHHCCCCCCEEEEECCCEECHHHHHCCCCCCCCHHHCCCEEEEHHHH REFHGDGKKYLTKQAVKDRPACTNCHKTINSKTLLTKKAHSVHRGKVSCYGCHSGGQYRN HHHCCCHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCC CYDCHEGTGAKAEPGFILGKNPRNTKEVTTLRVIPTVRNSFEKVGIRMEKFDALPNYWNS CCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEEHHHHHHHHHHCCCHHHHHCCCCCCCC PVHNIRKRTDRTRSCDSCHTDRTGFLTWETLLKGGAKANERLIHTPKPITR HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA