Definition Syntrophus aciditrophicus SB chromosome, complete genome.
Accession NC_007759
Length 3,179,300

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The map label for this gene is 85857914

Identifier: 85857914

GI number: 85857914

Start: 71702

End: 72034

Strand: Direct

Name: 85857914

Synonym: SYN_03267

Alternate gene names: NA

Gene position: 71702-72034 (Clockwise)

Preceding gene: 85857913

Following gene: 85857915

Centisome position: 2.26

GC content: 54.05

Gene sequence:

>333_bases
ATGTGCGTGTTGAATTCCGATCAACTGGAACCGGGGATGATACTGGCCGGACCGATCTTGATGAAAAACGGCATGGTCCT
TTTCGGGAAGGGCACGGAATTAACGGAAGCTTACATTGAGCGGATTCGCAGTATGACCTTGAAAGGCATCTCCATTGTGG
AAAGGGCGCCGCTTTACGAGTCCCGGGAGCAGCTCCTGGAGAAGCTGGAGGCGCGGTTCCGGCCTGTCGGACAGCAGCCC
TACATGAAGATGCTGAAGCGGCTGGTTGAAGAGCGCATCCTGGAGTGCGATGAGCAGGAAAAAAAAGAAGATTCCCGGGG
AAAGAGCGAATAA

Upstream 100 bases:

>100_bases
TGCAGGAGATGCTCGATGCCGTTGATGAGCTCCTCGGCGAAGGCGGTGCATCCGGTTAGAGGAGAACGTTCCGGAGCAGA
CGAAAGGAGCCGGATGTTTC

Downstream 100 bases:

>100_bases
AATCGTGAGGATAAGCGGTGGTTCCGGTGCCGGATAATCCCACGGATATCCGTATCCTGCGCCACAGGATTGAAAAGATC
GACATGCTGCCCACGATTTC

Product: cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MCVLNSDQLEPGMILAGPILMKNGMVLFGKGTELTEAYIERIRSMTLKGISIVERAPLYESREQLLEKLEARFRPVGQQP
YMKMLKRLVEERILECDEQEKKEDSRGKSE

Sequences:

>Translated_110_residues
MCVLNSDQLEPGMILAGPILMKNGMVLFGKGTELTEAYIERIRSMTLKGISIVERAPLYESREQLLEKLEARFRPVGQQP
YMKMLKRLVEERILECDEQEKKEDSRGKSE
>Mature_110_residues
MCVLNSDQLEPGMILAGPILMKNGMVLFGKGTELTEAYIERIRSMTLKGISIVERAPLYESREQLLEKLEARFRPVGQQP
YMKMLKRLVEERILECDEQEKKEDSRGKSE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12690; Mature: 12690

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVLNSDQLEPGMILAGPILMKNGMVLFGKGTELTEAYIERIRSMTLKGISIVERAPLYE
CCCCCCCCCCCCEEEECHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SREQLLEKLEARFRPVGQQPYMKMLKRLVEERILECDEQEKKEDSRGKSE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC
>Mature Secondary Structure
MCVLNSDQLEPGMILAGPILMKNGMVLFGKGTELTEAYIERIRSMTLKGISIVERAPLYE
CCCCCCCCCCCCEEEECHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
SREQLLEKLEARFRPVGQQPYMKMLKRLVEERILECDEQEKKEDSRGKSE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA