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The map label for this gene is arcB [C]

Identifier: 85857912

GI number: 85857912

Start: 69415

End: 71262

Strand: Direct

Name: arcB [C]

Synonym: SYN_00174

Alternate gene names: 85857912

Gene position: 69415-71262 (Clockwise)

Preceding gene: 85857911

Following gene: 85857913

Centisome position: 2.18

GC content: 56.01

Gene sequence:

>1848_bases
TTGAAGGGGCGGCAGCCTGCTGCCGAATTGAACGGGCAGGTCGGGGAAGGATCTCGTGGTATGAACGAAGGGGGCCAGGT
CAGGGCCGGTCGGATGCGGGACAGGGTTGTCCTGGGGCGGCGATGGATGCCGACGGAGCCGGCGGAAGACGAAACCGAAC
GGCTCCGGGAGGAACTCCTGGAAACCCGGAAGAGACTTCGGGATTTTAAAGCCCTGATCAATCGGAGCCCGGCGGCGGTC
TTTCTGTGGCGCGTTACAGCCGGCCGGCCAGTGGAATTTGTCTGTGGCAATGTGACCCAGTTCGGTTATACAAGGAAGGA
ATTCCTGGATGGCGACGTTTCCTGGACAGCGATTATCCATCCCGATGACATTGCCTGTCTGGAAAGGGAGAAGGAAGAAT
GTGCCGCCCGGGGGATTGACAAATTCACCCGGGAATACCGGATTTTCACGAGATCGGGTGAAATCCGCTGGATCGAGGAT
CGAACAGTGGCTATCCGGGATGAACGGGGGATCACAACGCACTATCAGGGGGTACTTCTGGATGTGACGGATCGCAAGCG
TCTGGAGGAGATGCGCTGCAATACCAGAGAGGAGCTGGAACGGCGGGTGGCTGAACGGACCGCCGAACTGGCCCGGGTCA
ATGAAGAGCTCCAGCTTGACATCGCCATGCGCAGGGAGGCTGAAGAAAGCCGCAGGCAGTTGGAGCAGATGCTTCAGCAG
GCGCAGAAGATGGAAGCGATCGGCACGCTGGCAGGCGGAATTGCACATGATTTCAACAACATCCTGGGTGGGATCATGGG
GTTTACGGAGCTGGCCCTCCTGGATATCCCGGAAGGAAGTCCGGCTTGCCTGAATCTGAAACAGTCTCTGAAAGCGCAGC
ATCGAGCCATCGAAATGGTCAATCAGATTCTGGCCTTCGGTCGCCAGACGGAAGGCGATCCCATTCCGGTCAAGGTCAGC
ACGATCGTCAAGGAAGCCGTGAAGCTGCTCCGAATGTCGATTCCAGCCATGATTGACATTGTGTTGAAAAACGATGCCGC
TTCGGACATGGTCATCGTCGATCCCACCCGGATTCACCAGATCCTCATGAATCTCTGCACCAATGCGGCCCATGCCATGC
GTGAGCGGGGAGGCAGACTCACGGTTTCGCTGTTCAATGTTTCGATTGATCTGGAAGCCGCTCTGGCTTATCCGGAAATT
CTGCCCGGACTCTATATCGAGTTGGCGGTGGAAGATACGGGGCATGGCATTGATCCCCAAATCCAGGACCGGATTTTTGA
CCCCTTCTTTACGACCAAAAAACCCGGAGAAGGCACGGGGATGGGACTGGCTGTGGTTTATGGGATCGTTAAAGACTTCA
AGGGCGCCATTGACCTGGACAGTCAGCCCGGCAAGGGGACCCGGTTCCGCGTGCTGATTCCTGCGATTGAATCCAGGGAG
GAAGAATGCACAACGACAGGTTCGATCCCCCGGGGGCGGGAACGGATTCTTTTCGTGGATGACGAAAAGTGTCTGGTTCG
GATTGCTGAACAATTGCTGACCCGACTTGGCTATAAGATTGTGGCGAGCATGAGCAGTATCGAGGCCCTGGAAGCCTTTC
GCAGCCGGCCGGAAAGCTTCGATCTGGTGATTACCGATCTGAACATGCCCGATATGACCGGGATCGACCTTTCCAGGGAA
CTGCTTCATATCCGGGCGGACATCCCGATTATTCTCTGTACGGGATTCAGCGAGCAGATCATTGAAGAAAAGGCGAGAAA
ACTGGGCATCCGGGAATTTATTTTCAAACCGTTCATCATGAGCACAATGGCACAGGTTATTCGGGATGTCCTGGAGTGTC
GGGAGTAA

Upstream 100 bases:

>100_bases
ACGCCATGGTGGAGGACTGCCGCGGCTTGATTTCGCGGGGGGGGCACAGGCTGGACTGTTTCGCCATGAATCAGGAAATG
GAAATCATTCTGTAAAAACC

Downstream 100 bases:

>100_bases
CTGAGGGGGCAAAGATGCCGCGTATTCTGGTTGTGGAAGATGATGAACCGCTGCGGTCCGTTCTGAGGCAGATTCTGGAA
CGAACAGGCCATGAAGTGGC

Product: signal transduction histidine kinase

Products: NA

Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAEDETERLREELLETRKRLRDFKALINRSPAAV
FLWRVTAGRPVEFVCGNVTQFGYTRKEFLDGDVSWTAIIHPDDIACLEREKEECAARGIDKFTREYRIFTRSGEIRWIED
RTVAIRDERGITTHYQGVLLDVTDRKRLEEMRCNTREELERRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQ
AQKMEAIGTLAGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMVNQILAFGRQTEGDPIPVKVS
TIVKEAVKLLRMSIPAMIDIVLKNDAASDMVIVDPTRIHQILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEI
LPGLYIELAVEDTGHGIDPQIQDRIFDPFFTTKKPGEGTGMGLAVVYGIVKDFKGAIDLDSQPGKGTRFRVLIPAIESRE
EECTTTGSIPRGRERILFVDDEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESFDLVITDLNMPDMTGIDLSRE
LLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIMSTMAQVIRDVLECRE

Sequences:

>Translated_615_residues
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAEDETERLREELLETRKRLRDFKALINRSPAAV
FLWRVTAGRPVEFVCGNVTQFGYTRKEFLDGDVSWTAIIHPDDIACLEREKEECAARGIDKFTREYRIFTRSGEIRWIED
RTVAIRDERGITTHYQGVLLDVTDRKRLEEMRCNTREELERRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQ
AQKMEAIGTLAGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMVNQILAFGRQTEGDPIPVKVS
TIVKEAVKLLRMSIPAMIDIVLKNDAASDMVIVDPTRIHQILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEI
LPGLYIELAVEDTGHGIDPQIQDRIFDPFFTTKKPGEGTGMGLAVVYGIVKDFKGAIDLDSQPGKGTRFRVLIPAIESRE
EECTTTGSIPRGRERILFVDDEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESFDLVITDLNMPDMTGIDLSRE
LLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIMSTMAQVIRDVLECRE
>Mature_615_residues
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAEDETERLREELLETRKRLRDFKALINRSPAAV
FLWRVTAGRPVEFVCGNVTQFGYTRKEFLDGDVSWTAIIHPDDIACLEREKEECAARGIDKFTREYRIFTRSGEIRWIED
RTVAIRDERGITTHYQGVLLDVTDRKRLEEMRCNTREELERRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQ
AQKMEAIGTLAGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMVNQILAFGRQTEGDPIPVKVS
TIVKEAVKLLRMSIPAMIDIVLKNDAASDMVIVDPTRIHQILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEI
LPGLYIELAVEDTGHGIDPQIQDRIFDPFFTTKKPGEGTGMGLAVVYGIVKDFKGAIDLDSQPGKGTRFRVLIPAIESRE
EECTTTGSIPRGRERILFVDDEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESFDLVITDLNMPDMTGIDLSRE
LLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIMSTMAQVIRDVLECRE

Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=413, Percent_Identity=26.634382566586, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=30.3149606299213, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1788713, Length=374, Percent_Identity=25.9358288770053, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1788549, Length=247, Percent_Identity=28.3400809716599, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081816, Length=432, Percent_Identity=25.6944444444444, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1790300, Length=252, Percent_Identity=29.7619047619048, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1789149, Length=430, Percent_Identity=23.4883720930233, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI145693157, Length=327, Percent_Identity=24.1590214067278, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR011006
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR001789 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 69481; Mature: 69481

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAEDETERLREELL
CCCCCCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHEECCCCCCCCCCCCHHHHHHHHHH
ETRKRLRDFKALINRSPAAVFLWRVTAGRPVEFVCGNVTQFGYTRKEFLDGDVSWTAIIH
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCHHHHCCCHHHHCCCCCEEEEEEC
PDDIACLEREKEECAARGIDKFTREYRIFTRSGEIRWIEDRTVAIRDERGITTHYQGVLL
CCCHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEEECCEEEEECCCCCEEEECEEEE
DVTDRKRLEEMRCNTREELERRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQ
ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKMEAIGTLAGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
NQILAFGRQTEGDPIPVKVSTIVKEAVKLLRMSIPAMIDIVLKNDAASDMVIVDPTRIHQ
HHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEEEECHHHHHH
ILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEILPGLYIELAVEDTGHGIDPQ
HHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHCHHHCCCEEEEEEEECCCCCCCCH
IQDRIFDPFFTTKKPGEGTGMGLAVVYGIVKDFKGAIDLDSQPGKGTRFRVLIPAIESRE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHCCC
EECTTTGSIPRGRERILFVDDEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESF
HHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DLVITDLNMPDMTGIDLSRELLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIM
EEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH
STMAQVIRDVLECRE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGRQPAAELNGQVGEGSRGMNEGGQVRAGRMRDRVVLGRRWMPTEPAEDETERLREELL
CCCCCCHHHHCCCCCCCCCCCCCCCCEECCCHHHHHEECCCCCCCCCCCCHHHHHHHHHH
ETRKRLRDFKALINRSPAAVFLWRVTAGRPVEFVCGNVTQFGYTRKEFLDGDVSWTAIIH
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCCHHHHCCCHHHHCCCCCEEEEEEC
PDDIACLEREKEECAARGIDKFTREYRIFTRSGEIRWIEDRTVAIRDERGITTHYQGVLL
CCCHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEEECCEEEEECCCCCEEEECEEEE
DVTDRKRLEEMRCNTREELERRVAERTAELARVNEELQLDIAMRREAEESRRQLEQMLQQ
ECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AQKMEAIGTLAGGIAHDFNNILGGIMGFTELALLDIPEGSPACLNLKQSLKAQHRAIEMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHH
NQILAFGRQTEGDPIPVKVSTIVKEAVKLLRMSIPAMIDIVLKNDAASDMVIVDPTRIHQ
HHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEEEECHHHHHH
ILMNLCTNAAHAMRERGGRLTVSLFNVSIDLEAALAYPEILPGLYIELAVEDTGHGIDPQ
HHHHHHHHHHHHHHHCCCEEEEEEEEEEEEHHHHHHCHHHCCCEEEEEEEECCCCCCCCH
IQDRIFDPFFTTKKPGEGTGMGLAVVYGIVKDFKGAIDLDSQPGKGTRFRVLIPAIESRE
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHCCC
EECTTTGSIPRGRERILFVDDEKCLVRIAEQLLTRLGYKIVASMSSIEALEAFRSRPESF
HHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
DLVITDLNMPDMTGIDLSRELLHIRADIPIILCTGFSEQIIEEKARKLGIREFIFKPFIM
EEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCHHHHHHHHHHH
STMAQVIRDVLECRE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA