BacMap

Definition	Syntrophus aciditrophicus SB chromosome, complete genome.
Accession	NC_007759
Length	3,179,300

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The map label for this gene is deaD [H]

Identifier: 85857908

GI number: 85857908

Start: 64776

End: 66353

Strand: Direct

Name: deaD [H]

Synonym: SYN_00178

Alternate gene names: 85857908

Gene position: 64776-66353 (Clockwise)

Preceding gene: 85857907

Following gene: 85857909

Centisome position: 2.04

GC content: 57.92

Gene sequence:

>1578_bases
ATGCCTATGGACCCCACATTGAACGATCAAGAACCCGAATCGACACCGCCTGCAGACCAGAATTTCAATGATCCCGGGGA
GGAGCCGATCCTGGAGCCGACCGACGCCCTGCCCGAGGTCGCTCTGGAGTGTTTGCCCCCGACGATAAGGGATGCTGCCA
CCCGCGCGGGGTGGACGAAACTGATGGACGTTCAGGCCAAGGCGATTCCCTATATCCTGGCCCGGCGGGATCTCATGATC
CAGTCGAAAACGGGCAGTGGAAAGACGGGAGCCTATCTCCTGCCCATACTGGGACGTCTTGACCCGCGGAAGGCCGCCTG
CCAGGCCATGATTCTTGTGCCGACTCGGGAACTGGCCCTTCAGGTGTCGAGGGAAGCCCTCCTGCTGAGCGCCGACTCCG
GAATCCGCACAGCCGTTGCCTACGGCGGCGTTGGGTATCACGCCCAGCTCGAGGCCTTCCGGGAAGGGGCGCAGCTCGTC
ATCGGAACACCAGGGCGGATCCTGGATCATCTGATCCGGAGTTCCCTGTCGCTGAAAGCCTTGTCGATTCTGGTTTTCGA
TGAGGCGGATCGCATGCTGTCCATGGGATTCTATCCGGACATGAAGCGCATTCAGGAATTCATTCCCCGCGAGATCAATG
CCTATCTGCTGTCGGCCACGTTTCCGTCCCATGTTCTCCGCCTTGCCGGAGAATTTCTGAGAAAACCGGAATTGCTGAGC
CTCAGTCGGGATCAGATTCACGTGACGGAAACGGAGCATGTGTACTATCTCGTTCCGGGAATGGGCAAGGAACGGTCTCT
TGTCCGGATCATCGAAGCGGAAAATCCCGTTTCCGCCATTATCTTCTGCAACACCAAAGCCACGGTCCATTTCGTGAGCG
TCGTACTGAAACGTTTCGGTTATGACGCGGACGAATTGAGTTCCGAACTGTCCCAGAAGGCACGGGAAAAAGTCATGGCG
CGGATTAGGAGCGGATTACTCCGTTTTCTGGTGGCCACGGATGTGGCAGCCAGAGGCATCGATATCCCGGACCTGTCCCA
TGTCATTCAATATGAACCGCCGGAAGATCCCGAGGCTTACATCCACCGGGCGGGCCGCACCGGCCGGAAAGGCGCCAGCG
GCGTCGCCATTTCCCTGGTTGCCGGGATGGAGCAGTTTCGGCTGCGGGACATCGCGAAGTCCTTCAGTATCGATATTCAG
GAACGGTCCCTGCCAAAAGATGAAGAAGTGGAAACGACCGTGTCCCAGCGAGTGATCGCTCTGCTGGAGGCCAAGATGAG
AATGCGTGACCGACTGCAGGTGGAACATATGCAGCGTTTCATTCCTCTGGTCAAAAGTCTGTTGCAGAATGAAGAAGAAA
TGGACCTGATCGCCATGCTGGTTGATGATTTCTATATGGCGACTCTGAATACGCCTCCTCCCCAGCCGCCGGAAGTGCAG
AAGTCGTCAGTGTCCGCTGGGGGGCCTGAGGCTGCCTCCGGGGCAAAAAAGAAACGCCGCCATCGCAAATCTTCCCGCAG
CATGGCCGGAAGCCGATCGGACAGCGGCGAATCCACGGGAGAAACGGAAGGGGATTAA

Upstream 100 bases:

>100_bases
AGAAAAGAATTGAATTTTCAAGGATTCGGTGCAATGATTGCGCGCTTGAATTTACTGCTGAAAAGTCACTTTCCCTTAAA
AAAGCGATAATTGCTGAAGG

Downstream 100 bases:

>100_bases
TTTTTCTCTTCCGCAATGACCGGCTCTACTTCCCATCCCATGTTTCCGGCGCCGCAGCGGTGAAAGTTCCCATGCCGGCC
TTCCATGAAGATCCGCCGGT

Product: superfamily II DNA/RNA helicase

Products: NA

Alternate protein names: ATP-dependent RNA helicase deaD [H]

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MPMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIRDAATRAGWTKLMDVQAKAIPYILARRDLMI
QSKTGSGKTGAYLLPILGRLDPRKAACQAMILVPTRELALQVSREALLLSADSGIRTAVAYGGVGYHAQLEAFREGAQLV
IGTPGRILDHLIRSSLSLKALSILVFDEADRMLSMGFYPDMKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLS
LSRDQIHVTETEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFGYDADELSSELSQKAREKVMA
RIRSGLLRFLVATDVAARGIDIPDLSHVIQYEPPEDPEAYIHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQ
ERSLPKDEEVETTVSQRVIALLEAKMRMRDRLQVEHMQRFIPLVKSLLQNEEEMDLIAMLVDDFYMATLNTPPPQPPEVQ
KSSVSAGGPEAASGAKKKRRHRKSSRSMAGSRSDSGESTGETEGD

Sequences:

>Translated_525_residues
MPMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIRDAATRAGWTKLMDVQAKAIPYILARRDLMI
QSKTGSGKTGAYLLPILGRLDPRKAACQAMILVPTRELALQVSREALLLSADSGIRTAVAYGGVGYHAQLEAFREGAQLV
IGTPGRILDHLIRSSLSLKALSILVFDEADRMLSMGFYPDMKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLS
LSRDQIHVTETEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFGYDADELSSELSQKAREKVMA
RIRSGLLRFLVATDVAARGIDIPDLSHVIQYEPPEDPEAYIHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQ
ERSLPKDEEVETTVSQRVIALLEAKMRMRDRLQVEHMQRFIPLVKSLLQNEEEMDLIAMLVDDFYMATLNTPPPQPPEVQ
KSSVSAGGPEAASGAKKKRRHRKSSRSMAGSRSDSGESTGETEGD
>Mature_524_residues
PMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIRDAATRAGWTKLMDVQAKAIPYILARRDLMIQ
SKTGSGKTGAYLLPILGRLDPRKAACQAMILVPTRELALQVSREALLLSADSGIRTAVAYGGVGYHAQLEAFREGAQLVI
GTPGRILDHLIRSSLSLKALSILVFDEADRMLSMGFYPDMKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLSL
SRDQIHVTETEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFGYDADELSSELSQKAREKVMAR
IRSGLLRFLVATDVAARGIDIPDLSHVIQYEPPEDPEAYIHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQE
RSLPKDEEVETTVSQRVIALLEAKMRMRDRLQVEHMQRFIPLVKSLLQNEEEMDLIAMLVDDFYMATLNTPPPQPPEVQK
SSVSAGGPEAASGAKKKRRHRKSSRSMAGSRSDSGESTGETEGD

Specific function: Has a helix-destabilizing activity. Plays a key role in optimal cell growth at low temperature and is required for normal cell division [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=346, Percent_Identity=34.6820809248555, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI20149629, Length=331, Percent_Identity=37.1601208459215, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI164664518, Length=358, Percent_Identity=34.0782122905028, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI41327771, Length=372, Percent_Identity=34.9462365591398, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI262118318, Length=350, Percent_Identity=36.5714285714286, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI216548263, Length=350, Percent_Identity=36.5714285714286, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI13518015, Length=351, Percent_Identity=36.4672364672365, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI262231852, Length=351, Percent_Identity=36.4672364672365, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI169881239, Length=419, Percent_Identity=34.8448687350835, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI13514809, Length=419, Percent_Identity=34.8448687350835, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI50659095, Length=387, Percent_Identity=33.8501291989664, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI87196351, Length=346, Percent_Identity=37.2832369942197, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI301171467, Length=346, Percent_Identity=37.2832369942197, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI301171475, Length=346, Percent_Identity=37.2832369942197, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=35.5191256830601, Blast_Score=202, Evalue=7e-52,
Organism=Homo sapiens, GI222352149, Length=386, Percent_Identity=32.1243523316062, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI45446747, Length=331, Percent_Identity=35.0453172205438, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI45446743, Length=331, Percent_Identity=35.0453172205438, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI41327773, Length=366, Percent_Identity=32.5136612021858, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI13129006, Length=368, Percent_Identity=32.6086956521739, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI224593278, Length=410, Percent_Identity=32.6829268292683, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI148613856, Length=346, Percent_Identity=32.9479768786127, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI38201710, Length=346, Percent_Identity=32.9479768786127, Blast_Score=186, Evalue=7e-47,
Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=31.638418079096, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI4758138, Length=348, Percent_Identity=31.6091954022989, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI55749865, Length=369, Percent_Identity=29.810298102981, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI4503529, Length=350, Percent_Identity=33.7142857142857, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI41327776, Length=331, Percent_Identity=34.7432024169184, Blast_Score=182, Evalue=7e-46,
Organism=Homo sapiens, GI83700235, Length=347, Percent_Identity=34.0057636887608, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI164419743, Length=333, Percent_Identity=34.5345345345345, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI51094101, Length=333, Percent_Identity=34.5345345345345, Blast_Score=179, Evalue=7e-45,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=32.8651685393258, Blast_Score=178, Evalue=1e-44,
Organism=Homo sapiens, GI8922886, Length=380, Percent_Identity=31.3157894736842, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI9506931, Length=399, Percent_Identity=32.3308270676692, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI6005743, Length=381, Percent_Identity=31.496062992126, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=31.9783197831978, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=30.6233062330623, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI41327779, Length=447, Percent_Identity=29.9776286353468, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=32.183908045977, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI38327634, Length=393, Percent_Identity=30.0254452926209, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI21040371, Length=377, Percent_Identity=27.3209549071618, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI4758112, Length=377, Percent_Identity=27.0557029177719, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI18375623, Length=377, Percent_Identity=27.0557029177719, Blast_Score=156, Evalue=5e-38,
Organism=Homo sapiens, GI17505907, Length=402, Percent_Identity=30.5970149253731, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI13514831, Length=418, Percent_Identity=26.7942583732057, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI256223453, Length=355, Percent_Identity=26.7605633802817, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI9966805, Length=350, Percent_Identity=27.4285714285714, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI154759257, Length=453, Percent_Identity=25.1655629139073, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI38569505, Length=358, Percent_Identity=28.2122905027933, Blast_Score=122, Evalue=7e-28,
Organism=Homo sapiens, GI38569503, Length=377, Percent_Identity=27.8514588859416, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI256773275, Length=396, Percent_Identity=28.7878787878788, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=28.5285285285285, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI20336298, Length=203, Percent_Identity=36.9458128078818, Blast_Score=110, Evalue=4e-24,
Organism=Escherichia coli, GI87082221, Length=439, Percent_Identity=38.2687927107062, Blast_Score=279, Evalue=4e-76,
Organism=Escherichia coli, GI1787605, Length=399, Percent_Identity=36.8421052631579, Blast_Score=238, Evalue=1e-63,
Organism=Escherichia coli, GI1787016, Length=375, Percent_Identity=37.8666666666667, Blast_Score=233, Evalue=3e-62,
Organism=Escherichia coli, GI1790214, Length=348, Percent_Identity=36.7816091954023, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI1788930, Length=335, Percent_Identity=34.9253731343284, Blast_Score=190, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17555296, Length=331, Percent_Identity=39.8791540785499, Blast_Score=238, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI71995724, Length=346, Percent_Identity=34.971098265896, Blast_Score=227, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17507121, Length=346, Percent_Identity=34.6820809248555, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=426, Percent_Identity=33.8028169014084, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17510307, Length=426, Percent_Identity=33.8028169014084, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71995514, Length=426, Percent_Identity=33.8028169014084, Blast_Score=213, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17552114, Length=401, Percent_Identity=32.1695760598504, Blast_Score=210, Evalue=1e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=346, Percent_Identity=32.6589595375723, Blast_Score=204, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=33.6927223719677, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI86570094, Length=356, Percent_Identity=35.6741573033708, Blast_Score=192, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI71999646, Length=351, Percent_Identity=33.9031339031339, Blast_Score=189, Evalue=4e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=351, Percent_Identity=33.9031339031339, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI71995718, Length=386, Percent_Identity=33.6787564766839, Blast_Score=188, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=35.4466858789625, Blast_Score=187, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI115533224, Length=352, Percent_Identity=30.9659090909091, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI193206561, Length=318, Percent_Identity=31.4465408805031, Blast_Score=175, Evalue=4e-44,
Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=32.1052631578947, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI17510559, Length=422, Percent_Identity=29.3838862559242, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17552642, Length=325, Percent_Identity=36, Blast_Score=171, Evalue=7e-43,
Organism=Caenorhabditis elegans, GI115532546, Length=329, Percent_Identity=34.0425531914894, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17507881, Length=365, Percent_Identity=30.958904109589, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17507877, Length=380, Percent_Identity=33.4210526315789, Blast_Score=161, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=403, Percent_Identity=30.272952853598, Blast_Score=160, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI17507945, Length=333, Percent_Identity=32.7327327327327, Blast_Score=159, Evalue=3e-39,
Organism=Caenorhabditis elegans, GI17507879, Length=368, Percent_Identity=31.5217391304348, Blast_Score=155, Evalue=5e-38,
Organism=Caenorhabditis elegans, GI71982858, Length=381, Percent_Identity=28.0839895013123, Blast_Score=152, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17505370, Length=332, Percent_Identity=29.8192771084337, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17509811, Length=372, Percent_Identity=30.3763440860215, Blast_Score=150, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17536099, Length=344, Percent_Identity=28.7790697674419, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17536101, Length=344, Percent_Identity=28.7790697674419, Blast_Score=139, Evalue=5e-33,
Organism=Caenorhabditis elegans, GI17536103, Length=344, Percent_Identity=28.7790697674419, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17553716, Length=347, Percent_Identity=27.6657060518732, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148203, Length=383, Percent_Identity=26.1096605744125, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17508543, Length=351, Percent_Identity=27.3504273504274, Blast_Score=128, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=28.2776349614396, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17556951, Length=342, Percent_Identity=28.0701754385965, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=28.5714285714286, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=25.4691689008043, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=29.4765840220386, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=27.6276276276276, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI25148205, Length=325, Percent_Identity=24.9230769230769, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71982862, Length=202, Percent_Identity=29.7029702970297, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=96, Percent_Identity=41.6666666666667, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25145561, Length=414, Percent_Identity=23.9130434782609, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564293, Length=342, Percent_Identity=25.4385964912281, Blast_Score=73, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6324778, Length=383, Percent_Identity=36.0313315926893, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320041, Length=344, Percent_Identity=34.3023255813954, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6325138, Length=350, Percent_Identity=37.7142857142857, Blast_Score=209, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6320224, Length=344, Percent_Identity=34.8837209302326, Blast_Score=206, Evalue=6e-54,
Organism=Saccharomyces cerevisiae, GI6321856, Length=339, Percent_Identity=37.4631268436578, Blast_Score=204, Evalue=4e-53,
Organism=Saccharomyces cerevisiae, GI6322912, Length=345, Percent_Identity=35.3623188405797, Blast_Score=202, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6322323, Length=345, Percent_Identity=35.3623188405797, Blast_Score=202, Evalue=9e-53,
Organism=Saccharomyces cerevisiae, GI6324217, Length=344, Percent_Identity=33.7209302325581, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6321360, Length=332, Percent_Identity=35.8433734939759, Blast_Score=193, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=365, Percent_Identity=32.3287671232877, Blast_Score=186, Evalue=7e-48,
Organism=Saccharomyces cerevisiae, GI6323021, Length=346, Percent_Identity=32.3699421965318, Blast_Score=177, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6323947, Length=347, Percent_Identity=33.4293948126801, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=362, Percent_Identity=32.8729281767956, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=31.638418079096, Blast_Score=159, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=31.129476584022, Blast_Score=158, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6319714, Length=351, Percent_Identity=30.1994301994302, Blast_Score=158, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6323306, Length=391, Percent_Identity=27.1099744245524, Blast_Score=151, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6320400, Length=436, Percent_Identity=30.9633027522936, Blast_Score=148, Evalue=2e-36,
Organism=Saccharomyces cerevisiae, GI6320449, Length=335, Percent_Identity=31.044776119403, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6319618, Length=446, Percent_Identity=28.0269058295964, Blast_Score=139, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6320119, Length=365, Percent_Identity=28.4931506849315, Blast_Score=139, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=28.4090909090909, Blast_Score=119, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6321267, Length=326, Percent_Identity=27.9141104294479, Blast_Score=116, Evalue=7e-27,
Organism=Saccharomyces cerevisiae, GI6320173, Length=230, Percent_Identity=29.5652173913043, Blast_Score=111, Evalue=3e-25,
Organism=Saccharomyces cerevisiae, GI6322876, Length=205, Percent_Identity=32.1951219512195, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI24584399, Length=342, Percent_Identity=35.9649122807018, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI28574962, Length=372, Percent_Identity=33.6021505376344, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI24583281, Length=357, Percent_Identity=33.6134453781513, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24583279, Length=357, Percent_Identity=33.6134453781513, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24584994, Length=386, Percent_Identity=34.4559585492228, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24645031, Length=346, Percent_Identity=33.5260115606936, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24585582, Length=389, Percent_Identity=33.4190231362468, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=33.5164835164835, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI17985987, Length=362, Percent_Identity=36.1878453038674, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24644487, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI45551833, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24644485, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24644479, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24644483, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI281361218, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24644481, Length=346, Percent_Identity=32.9479768786127, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24642151, Length=356, Percent_Identity=32.3033707865169, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24662330, Length=342, Percent_Identity=33.6257309941521, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24582080, Length=346, Percent_Identity=32.6589595375723, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24582078, Length=346, Percent_Identity=32.6589595375723, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI17136248, Length=346, Percent_Identity=32.6589595375723, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24582075, Length=346, Percent_Identity=32.6589595375723, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI18857967, Length=363, Percent_Identity=33.8842975206612, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI21356161, Length=362, Percent_Identity=34.2541436464088, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI17136814, Length=350, Percent_Identity=33.4285714285714, Blast_Score=186, Evalue=3e-47,
Organism=Drosophila melanogaster, GI281365720, Length=321, Percent_Identity=33.0218068535826, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI28575014, Length=344, Percent_Identity=32.2674418604651, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI17977678, Length=353, Percent_Identity=31.728045325779, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=30.4945054945055, Blast_Score=160, Evalue=3e-39,
Organism=Drosophila melanogaster, GI18859659, Length=474, Percent_Identity=28.6919831223629, Blast_Score=158, Evalue=7e-39,
Organism=Drosophila melanogaster, GI28571338, Length=474, Percent_Identity=28.9029535864979, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=29.9435028248588, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=29.9435028248588, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI24581954, Length=382, Percent_Identity=28.5340314136126, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24581952, Length=382, Percent_Identity=28.5340314136126, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24581956, Length=382, Percent_Identity=28.5340314136126, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24643725, Length=395, Percent_Identity=29.3670886075949, Blast_Score=146, Evalue=4e-35,
Organism=Drosophila melanogaster, GI21355559, Length=373, Percent_Identity=30.5630026809651, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI20130173, Length=305, Percent_Identity=28.5245901639344, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=30.4597701149425, Blast_Score=128, Evalue=9e-30,
Organism=Drosophila melanogaster, GI17136666, Length=413, Percent_Identity=26.8765133171913, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24642822, Length=447, Percent_Identity=27.7404921700224, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24668515, Length=333, Percent_Identity=29.1291291291291, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19920478, Length=421, Percent_Identity=23.9904988123515, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24640164, Length=321, Percent_Identity=22.1183800623053, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021046
- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF12343 DEADboxA; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 58080; Mature: 57949

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIRDAATRAGWTK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LMDVQAKAIPYILARRDLMIQSKTGSGKTGAYLLPILGRLDPRKAACQAMILVPTRELAL
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHCCEEEEECCHHHHH
QVSREALLLSADSGIRTAVAYGGVGYHAQLEAFREGAQLVIGTPGRILDHLIRSSLSLKA
HHHHHEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHH
LSILVFDEADRMLSMGFYPDMKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLS
EEEEEECCHHHHHHCCCCCCHHHHHHHCCHHHHHEEEECCCHHHHHHHHHHHHCCCCHHC
LSRDQIHVTETEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFG
CCCCEEEEEECCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHC
YDADELSSELSQKAREKVMARIRSGLLRFLVATDVAARGIDIPDLSHVIQYEPPEDPEAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHH
IHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQERSLPKDEEVETTVSQRVIA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHH
LLEAKMRMRDRLQVEHMQRFIPLVKSLLQNEEEMDLIAMLVDDFYMATLNTPPPQPPEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC
KSSVSAGGPEAASGAKKKRRHRKSSRSMAGSRSDSGESTGETEGD
CCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PMDPTLNDQEPESTPPADQNFNDPGEEPILEPTDALPEVALECLPPTIRDAATRAGWTK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
LMDVQAKAIPYILARRDLMIQSKTGSGKTGAYLLPILGRLDPRKAACQAMILVPTRELAL
HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHCCEEEEECCHHHHH
QVSREALLLSADSGIRTAVAYGGVGYHAQLEAFREGAQLVIGTPGRILDHLIRSSLSLKA
HHHHHEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHH
LSILVFDEADRMLSMGFYPDMKRIQEFIPREINAYLLSATFPSHVLRLAGEFLRKPELLS
EEEEEECCHHHHHHCCCCCCHHHHHHHCCHHHHHEEEECCCHHHHHHHHHHHHCCCCHHC
LSRDQIHVTETEHVYYLVPGMGKERSLVRIIEAENPVSAIIFCNTKATVHFVSVVLKRFG
CCCCEEEEEECCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHC
YDADELSSELSQKAREKVMARIRSGLLRFLVATDVAARGIDIPDLSHVIQYEPPEDPEAY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCHHHH
IHRAGRTGRKGASGVAISLVAGMEQFRLRDIAKSFSIDIQERSLPKDEEVETTVSQRVIA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHH
LLEAKMRMRDRLQVEHMQRFIPLVKSLLQNEEEMDLIAMLVDDFYMATLNTPPPQPPEVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCC
KSSVSAGGPEAASGAKKKRRHRKSSRSMAGSRSDSGESTGETEGD
CCCCCCCCCHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8056751 [H]