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The map label for this gene is 85375835

Identifier: 85375835

GI number: 85375835

Start: 3038718

End: 3039275

Strand: Reverse

Name: 85375835

Synonym: ELI_15040

Alternate gene names: NA

Gene position: 3039275-3038718 (Counterclockwise)

Preceding gene: 85375838

Following gene: 85375834

Centisome position: 99.57

GC content: 62.01

Gene sequence:

>558_bases
GTGCTGGCAAAAGACACCGAGATGCTGATCGTCGACTGGGGCATGGGTGACACCACAGCCCGCGACCGGGCCATCGCGCG
CCTGTATCCCGAGCTACAGCAAATTGCGTCCGCTCGGCTGCGGCGCGAAGTCGGCAGCTCGATGTCCACCCATGACCTCG
TCAACGACGCGGTGGAGAAAATCCTTCGCATCGAGAACCCCGAAATCGGCGGGCGATCGCATTTCGTGGCGCTGGCTTCA
CGGGTCATGCGCAACGTGCTGGTCGACCACGCGCGCGCCAAGTCGACCGACAAGCGGCATCACCACAAGGTTGAACTCAA
CACCCGTATCCAGGGCGAAGGGCCGTTTGATCTCGCACGGCTCAATTCCGCGCTAGTCAGGTTGGAGGCAATCGACGCCG
AGCTGATGGAGATCGTGGAAATGCGCTATTTTGGAGGCATGACAGTACCGGAGGTTGCGGAAGTCACTGGATGGTCCGAA
CCGACGGTGAAAAGGCGATGGCAAGTGGCCCGGGCCTGGCTGGCCGATGCCATGTCCCATCCGCTCGCCCATGGCTGA

Upstream 100 bases:

>100_bases
GCCCGGTGCGCATTGTGCCGGGACAGGTCGTTGAAAAGGTTTTGACTCTCTCAAGTGAACGCGGAACAAAGTATTCGCGA
CATCAAGGGGGCCTATCGGC

Downstream 100 bases:

>100_bases
AATCGAACGCGAACGGCGGGCGCTGCAGCTTTTCGAAGCGATGCTGGAGATCGACGCGGGCGCACGCGAACGCTGGCTGG
CCGAGCATGCAGGCGACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Sigma Factor ECF-Like Family Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Sigma Factor Family Protein; Sigma Factor; Extracytoplasmic Sigma Factor ECF; RNA Polymerase Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-E Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLAKDTEMLIVDWGMGDTTARDRAIARLYPELQQIASARLRREVGSSMSTHDLVNDAVEKILRIENPEIGGRSHFVALAS
RVMRNVLVDHARAKSTDKRHHHKVELNTRIQGEGPFDLARLNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSE
PTVKRRWQVARAWLADAMSHPLAHG

Sequences:

>Translated_185_residues
MLAKDTEMLIVDWGMGDTTARDRAIARLYPELQQIASARLRREVGSSMSTHDLVNDAVEKILRIENPEIGGRSHFVALAS
RVMRNVLVDHARAKSTDKRHHHKVELNTRIQGEGPFDLARLNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSE
PTVKRRWQVARAWLADAMSHPLAHG
>Mature_185_residues
MLAKDTEMLIVDWGMGDTTARDRAIARLYPELQQIASARLRREVGSSMSTHDLVNDAVEKILRIENPEIGGRSHFVALAS
RVMRNVLVDHARAKSTDKRHHHKVELNTRIQGEGPFDLARLNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSE
PTVKRRWQVARAWLADAMSHPLAHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20843; Mature: 20843

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAKDTEMLIVDWGMGDTTARDRAIARLYPELQQIASARLRREVGSSMSTHDLVNDAVEK
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILRIENPEIGGRSHFVALASRVMRNVLVDHARAKSTDKRHHHKVELNTRIQGEGPFDLAR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCEECCCCCHHHHH
LNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSEPTVKRRWQVARAWLADAMSH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
PLAHG
CCCCC
>Mature Secondary Structure
MLAKDTEMLIVDWGMGDTTARDRAIARLYPELQQIASARLRREVGSSMSTHDLVNDAVEK
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ILRIENPEIGGRSHFVALASRVMRNVLVDHARAKSTDKRHHHKVELNTRIQGEGPFDLAR
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCEEEECCEECCCCCHHHHH
LNSALVRLEAIDAELMEIVEMRYFGGMTVPEVAEVTGWSEPTVKRRWQVARAWLADAMSH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
PLAHG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA