| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is gpmA
Identifier: 85375544
GI number: 85375544
Start: 2737542
End: 2738228
Strand: Reverse
Name: gpmA
Synonym: ELI_13585
Alternate gene names: 85375544
Gene position: 2738228-2737542 (Counterclockwise)
Preceding gene: 85375545
Following gene: 85375543
Centisome position: 89.71
GC content: 62.3
Gene sequence:
>687_bases ATGCCTACTCTCATCCTCGTTCGCCACGGCCAGAGCCAGTGGAACCTCGAAAACCGTTTCACCGGCTGGTGGGATGTCGA CCTGACCGAGAAGGGCGTCGAGGAAGCCAAGGCGGCAGGCACGCTTTTGAAGGAGAAGGGCGTGCTGCCCACGGTCGCTT TCACCAGCTTCCAGACCCGCGCGATCAAAACGTTGCATCTGGCGCTGGAAGAAGCGGACCGGCTGTGGATCCCGGAAACC AAGGACTGGCGGCTCAACGAGCGGCATTATGGCGGGCTGACCGGGCTCGACAAGCAGGAAATGCGCGACAAGCACGGTGA CGAGCAGGTGCATATCTGGCGCCGCAGCTTCGACGTGCCGCCGCCCGACATGGAGCCCGGACATCAATACGATCCCGGCG CCGATCCGCGCTATGACGGGATCGACGTGCCGACCACGGAAAGCCTCAAGCTCACCATCGAGCGGGTGCTGCCTTATTGG GAAAGCGAGATCCTGCCGGTGCTGGCGAGCGGTGAAACGGTGATCATTTCCGCCCATGGCAACAGCTTGCGCGCGCTGGT GAAGCACCTGTCCGGCATCTCGGATGAGGATATCACCGGGCTCGAGATTCCCACCGGCCAGCCGATCATCTACCAATTCG ACGACCGGATGCAGCCGGGCGAGCGCTATTACCTGAAGGACAGCTGA
Upstream 100 bases:
>100_bases CCAGCGAATCGGACGAAAGTGGGCTTTCCAAGCACAAAGACGCGGGCTAACGCGTCTTGCTCTTGTTCACGGGGCCAAGG CCCGGGATAGCGGAGCAAAA
Downstream 100 bases:
>100_bases GGCATGGGCGGAGCTAAAGTCGCTATCATCATGGGCAGCCAGTCCGACTGGCCGACGATGCAATGCGCCGCCGAGGTGCT CGACGAGCTGGAAGTGGCTT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MPTLILVRHGQSQWNLENRFTGWWDVDLTEKGVEEAKAAGTLLKEKGVLPTVAFTSFQTRAIKTLHLALEEADRLWIPET KDWRLNERHYGGLTGLDKQEMRDKHGDEQVHIWRRSFDVPPPDMEPGHQYDPGADPRYDGIDVPTTESLKLTIERVLPYW ESEILPVLASGETVIISAHGNSLRALVKHLSGISDEDITGLEIPTGQPIIYQFDDRMQPGERYYLKDS
Sequences:
>Translated_228_residues MPTLILVRHGQSQWNLENRFTGWWDVDLTEKGVEEAKAAGTLLKEKGVLPTVAFTSFQTRAIKTLHLALEEADRLWIPET KDWRLNERHYGGLTGLDKQEMRDKHGDEQVHIWRRSFDVPPPDMEPGHQYDPGADPRYDGIDVPTTESLKLTIERVLPYW ESEILPVLASGETVIISAHGNSLRALVKHLSGISDEDITGLEIPTGQPIIYQFDDRMQPGERYYLKDS >Mature_227_residues PTLILVRHGQSQWNLENRFTGWWDVDLTEKGVEEAKAAGTLLKEKGVLPTVAFTSFQTRAIKTLHLALEEADRLWIPETK DWRLNERHYGGLTGLDKQEMRDKHGDEQVHIWRRSFDVPPPDMEPGHQYDPGADPRYDGIDVPTTESLKLTIERVLPYWE SEILPVLASGETVIISAHGNSLRALVKHLSGISDEDITGLEIPTGQPIIYQFDDRMQPGERYYLKDS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI50593010, Length=221, Percent_Identity=51.5837104072398, Blast_Score=244, Evalue=4e-65, Organism=Homo sapiens, GI4505753, Length=221, Percent_Identity=53.393665158371, Blast_Score=231, Evalue=4e-61, Organism=Homo sapiens, GI71274132, Length=221, Percent_Identity=50.2262443438914, Blast_Score=216, Evalue=1e-56, Organism=Homo sapiens, GI4502445, Length=232, Percent_Identity=47.4137931034483, Blast_Score=215, Evalue=2e-56, Organism=Homo sapiens, GI40353764, Length=232, Percent_Identity=47.4137931034483, Blast_Score=215, Evalue=2e-56, Organism=Homo sapiens, GI310129614, Length=160, Percent_Identity=54.375, Blast_Score=160, Evalue=9e-40, Organism=Escherichia coli, GI1786970, Length=228, Percent_Identity=58.3333333333333, Blast_Score=273, Evalue=8e-75, Organism=Saccharomyces cerevisiae, GI6322697, Length=229, Percent_Identity=55.8951965065502, Blast_Score=259, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6320183, Length=267, Percent_Identity=30.3370786516854, Blast_Score=125, Evalue=8e-30, Organism=Saccharomyces cerevisiae, GI6324516, Length=274, Percent_Identity=31.021897810219, Blast_Score=124, Evalue=9e-30, Organism=Drosophila melanogaster, GI24646216, Length=222, Percent_Identity=52.7027027027027, Blast_Score=238, Evalue=2e-63, Organism=Drosophila melanogaster, GI85725270, Length=222, Percent_Identity=52.7027027027027, Blast_Score=213, Evalue=6e-56, Organism=Drosophila melanogaster, GI85725272, Length=222, Percent_Identity=52.7027027027027, Blast_Score=213, Evalue=6e-56, Organism=Drosophila melanogaster, GI24650981, Length=222, Percent_Identity=52.7027027027027, Blast_Score=213, Evalue=6e-56, Organism=Drosophila melanogaster, GI28571815, Length=217, Percent_Identity=39.63133640553, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI28571817, Length=217, Percent_Identity=39.63133640553, Blast_Score=165, Evalue=2e-41, Organism=Drosophila melanogaster, GI24648979, Length=217, Percent_Identity=39.63133640553, Blast_Score=164, Evalue=3e-41,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA_ERYLH (Q2N682)
Other databases:
- EMBL: CP000157 - RefSeq: YP_459606.1 - HSSP: P07738 - ProteinModelPortal: Q2N682 - SMR: Q2N682 - STRING: Q2N682 - GeneID: 3870417 - GenomeReviews: CP000157_GR - KEGG: eli:ELI_13585 - NMPDR: fig|314225.3.peg.301 - eggNOG: COG0588 - HOGENOM: HBG658938 - OMA: TGWKDPD - PhylomeDB: Q2N682 - ProtClustDB: PRK14115 - BioCyc: ELIT314225:ELI_13585-MONOMER - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 26013; Mature: 25881
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 179-179
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLILVRHGQSQWNLENRFTGWWDVDLTEKGVEEAKAAGTLLKEKGVLPTVAFTSFQTR CCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHH AIKTLHLALEEADRLWIPETKDWRLNERHYGGLTGLDKQEMRDKHGDEQVHIWRRSFDVP HHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCC PPDMEPGHQYDPGADPRYDGIDVPTTESLKLTIERVLPYWESEILPVLASGETVIISAHG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCCCCCCEEEEECCCEEEEEECC NSLRALVKHLSGISDEDITGLEIPTGQPIIYQFDDRMQPGERYYLKDS CHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEECCC >Mature Secondary Structure PTLILVRHGQSQWNLENRFTGWWDVDLTEKGVEEAKAAGTLLKEKGVLPTVAFTSFQTR CEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHH AIKTLHLALEEADRLWIPETKDWRLNERHYGGLTGLDKQEMRDKHGDEQVHIWRRSFDVP HHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCC PPDMEPGHQYDPGADPRYDGIDVPTTESLKLTIERVLPYWESEILPVLASGETVIISAHG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCCCCCCEEEEECCCEEEEEECC NSLRALVKHLSGISDEDITGLEIPTGQPIIYQFDDRMQPGERYYLKDS CHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA