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The map label for this gene is yebA [H]

Identifier: 85375455

GI number: 85375455

Start: 2645353

End: 2646957

Strand: Direct

Name: yebA [H]

Synonym: ELI_13140

Alternate gene names: 85375455

Gene position: 2645353-2646957 (Clockwise)

Preceding gene: 85375447

Following gene: 85375456

Centisome position: 86.66

GC content: 68.1

Gene sequence:

>1605_bases
ATGACCGGCGATGAAGGCGGCGGCGACTGGCGCGCTGCCGCCCTGTCGCATGCGCAGATCATCGGATCCGAGCGTCACCA
CACCCTGCAGCGCGCCGACAGCCTGCGCGAAAGATTCCATACGTGGCGTTTCGAAACGGGCGAAAAGCTCGACCGGATCG
ATCTCGCGCCCGACCTTGCCGAACGGATCGGCAGCAAGCGCTGGTTTCGTGGCCTGACGACCCTGCTTGGCCTTTCGGCC
GTCGCGCTGTCATTCTGGCCAAGCTTCGAACCGCTAGAAGCCGCGCCTGCCGCCGCCATCGACCAGTCGGCGCGCGAAGA
GTTTCGTAGCCATGCCATCACGCCGCTGGCCCTCGGGGGGGACACCGGCAGCCGGATGGGTGCCAGTGCTCTGGTGGAAG
AGCTGCCTTCCGCGCCGGAACGCCCGCAGGTCCAGCTTGTTGCAACGCTCGCCCAGGGCGACAGTTTCACCCGCATGCTC
CGCCGCGCCGGTGTCGGCTCCGGCGATGCAGACCGCGTCGTCGATCTGATCTCGCGCGCCATACCGCTGGACGACATCGA
GTCGGGCACCCAGCTTGACATTACCCTGGGCCGCCGCCCTGCGCCGGGCGAAACGCGGCCGCTCGAAGCGATCGAATTCC
GCGCCCGTTTCGATCTTGCGCTCGGTATCCAGCGCGGCGACGACGGCAATCTCGCGCTTTTGCGCAAGCCGATCCGCGTC
GACGACACGCCGCTGCGCATTCGCGGTACGGTCGGCTCGAGCCTTTACCGCTCGGCTCGCGCCGCGGGAGCGCCTGCCAG
CGCTGTGCAGCAATATCTCAAGGCCGTGGGCGACCACGCCGATTTCGACCGCGCGGTCCGCGCGAGCGACACGTTCGACA
TGATCGTCTCCTACCGCCGCGCTGCCACCGGCGAACGCCAGGCCGGGCAATTGCTCTATGCCGGCATCGAACGCGGCGGC
GAAGCGCAGACCCAACTGATGCGCTGGGGCAAAGACGGGCGCTTTTACGAGGCATCGGGCGTCGGTGAACAGCGCAGCGG
CCTGCTCGCGCCGGTCAACGGCCCTGTCGGCTCGCGCTACGGTATGCGTCGCCACCCGATCCTGGGATACCGCCGCATGC
ACAGCGGCCTCGACTATCGCGCGGGCCACGGCACGCCGATCCGCGCGGTCACCGATGGCCAGGTGACCGGCGCGGGACGC
ATGGGCGGCTGCGGGATCGCGGTCCGCCTGAAGCACTCGGGCAGCCTGCAGACCCGCTATTGCCACATGAGCCGGATGGC
GGTGCGCAACGGACAGAACGTGCGCCGCGGGCAGGTGATCGGCTATGTCGGCTCGACCGGCCTTTCGACCGGGCCCCACC
TTCATTACGAGATGTATCGCAACGGCCGCGCGATCAATCCGGCTTCGGTGAACTATGTCACCCGCGCACAGCTTTCGGGA
GACGAATTGCAGCGTTTCCGCTCCTCGCTGGCGCAGTTGAAGACAGTAGAGGCCGGAGCGGCGTTGGTAGATCTCGCCCC
GCGCCCGGAAGAGCGCGACGAGCCCGAGCGCGAGATCGACAAGCTGGCCGTCGCACAGACGCGCCAGATCGCGGGCGGCC
CTTAG

Upstream 100 bases:

>100_bases
CCGCTAAGGGTGAGGTCGCAATCGGCAAATATTGCCAGCGGCTCCTTGGATCGAGGAGGGCGCACTGTACCAGGCGCGTG
CAGAAACGGGGGTCGGCGCT

Downstream 100 bases:

>100_bases
ACAATCCGCGCATTGCGCTGGCATAGTGAATGCGGCAACACTTGCCGCATGTCAGCATCCTATCCTGCAACGCGCCTGCG
CCGCACCCGGGCCACCGCCT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MTGDEGGGDWRAAALSHAQIIGSERHHTLQRADSLRERFHTWRFETGEKLDRIDLAPDLAERIGSKRWFRGLTTLLGLSA
VALSFWPSFEPLEAAPAAAIDQSAREEFRSHAITPLALGGDTGSRMGASALVEELPSAPERPQVQLVATLAQGDSFTRML
RRAGVGSGDADRVVDLISRAIPLDDIESGTQLDITLGRRPAPGETRPLEAIEFRARFDLALGIQRGDDGNLALLRKPIRV
DDTPLRIRGTVGSSLYRSARAAGAPASAVQQYLKAVGDHADFDRAVRASDTFDMIVSYRRAATGERQAGQLLYAGIERGG
EAQTQLMRWGKDGRFYEASGVGEQRSGLLAPVNGPVGSRYGMRRHPILGYRRMHSGLDYRAGHGTPIRAVTDGQVTGAGR
MGGCGIAVRLKHSGSLQTRYCHMSRMAVRNGQNVRRGQVIGYVGSTGLSTGPHLHYEMYRNGRAINPASVNYVTRAQLSG
DELQRFRSSLAQLKTVEAGAALVDLAPRPEERDEPEREIDKLAVAQTRQIAGGP

Sequences:

>Translated_534_residues
MTGDEGGGDWRAAALSHAQIIGSERHHTLQRADSLRERFHTWRFETGEKLDRIDLAPDLAERIGSKRWFRGLTTLLGLSA
VALSFWPSFEPLEAAPAAAIDQSAREEFRSHAITPLALGGDTGSRMGASALVEELPSAPERPQVQLVATLAQGDSFTRML
RRAGVGSGDADRVVDLISRAIPLDDIESGTQLDITLGRRPAPGETRPLEAIEFRARFDLALGIQRGDDGNLALLRKPIRV
DDTPLRIRGTVGSSLYRSARAAGAPASAVQQYLKAVGDHADFDRAVRASDTFDMIVSYRRAATGERQAGQLLYAGIERGG
EAQTQLMRWGKDGRFYEASGVGEQRSGLLAPVNGPVGSRYGMRRHPILGYRRMHSGLDYRAGHGTPIRAVTDGQVTGAGR
MGGCGIAVRLKHSGSLQTRYCHMSRMAVRNGQNVRRGQVIGYVGSTGLSTGPHLHYEMYRNGRAINPASVNYVTRAQLSG
DELQRFRSSLAQLKTVEAGAALVDLAPRPEERDEPEREIDKLAVAQTRQIAGGP
>Mature_533_residues
TGDEGGGDWRAAALSHAQIIGSERHHTLQRADSLRERFHTWRFETGEKLDRIDLAPDLAERIGSKRWFRGLTTLLGLSAV
ALSFWPSFEPLEAAPAAAIDQSAREEFRSHAITPLALGGDTGSRMGASALVEELPSAPERPQVQLVATLAQGDSFTRMLR
RAGVGSGDADRVVDLISRAIPLDDIESGTQLDITLGRRPAPGETRPLEAIEFRARFDLALGIQRGDDGNLALLRKPIRVD
DTPLRIRGTVGSSLYRSARAAGAPASAVQQYLKAVGDHADFDRAVRASDTFDMIVSYRRAATGERQAGQLLYAGIERGGE
AQTQLMRWGKDGRFYEASGVGEQRSGLLAPVNGPVGSRYGMRRHPILGYRRMHSGLDYRAGHGTPIRAVTDGQVTGAGRM
GGCGIAVRLKHSGSLQTRYCHMSRMAVRNGQNVRRGQVIGYVGSTGLSTGPHLHYEMYRNGRAINPASVNYVTRAQLSGD
ELQRFRSSLAQLKTVEAGAALVDLAPRPEERDEPEREIDKLAVAQTRQIAGGP

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=362, Percent_Identity=31.767955801105, Blast_Score=146, Evalue=3e-36,
Organism=Escherichia coli, GI87082297, Length=128, Percent_Identity=35.15625, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 57969; Mature: 57838

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDEGGGDWRAAALSHAQIIGSERHHTLQRADSLRERFHTWRFETGEKLDRIDLAPDLA
CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHH
ERIGSKRWFRGLTTLLGLSAVALSFWPSFEPLEAAPAAAIDQSAREEFRSHAITPLALGG
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEECC
DTGSRMGASALVEELPSAPERPQVQLVATLAQGDSFTRMLRRAGVGSGDADRVVDLISRA
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
IPLDDIESGTQLDITLGRRPAPGETRPLEAIEFRARFDLALGIQRGDDGNLALLRKPIRV
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCC
DDTPLRIRGTVGSSLYRSARAAGAPASAVQQYLKAVGDHADFDRAVRASDTFDMIVSYRR
CCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH
AATGERQAGQLLYAGIERGGEAQTQLMRWGKDGRFYEASGVGEQRSGLLAPVNGPVGSRY
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCHHHCCEEEECCCCCCCCC
GMRRHPILGYRRMHSGLDYRAGHGTPIRAVTDGQVTGAGRMGGCGIAVRLKHSGSLQTRY
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCCHHH
CHMSRMAVRNGQNVRRGQVIGYVGSTGLSTGPHLHYEMYRNGRAINPASVNYVTRAQLSG
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEECCCH
DELQRFRSSLAQLKTVEAGAALVDLAPRPEERDEPEREIDKLAVAQTRQIAGGP
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGDEGGGDWRAAALSHAQIIGSERHHTLQRADSLRERFHTWRFETGEKLDRIDLAPDLA
CCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHH
ERIGSKRWFRGLTTLLGLSAVALSFWPSFEPLEAAPAAAIDQSAREEFRSHAITPLALGG
HHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHHHCCCEEEECC
DTGSRMGASALVEELPSAPERPQVQLVATLAQGDSFTRMLRRAGVGSGDADRVVDLISRA
CCCCHHHHHHHHHHCCCCCCCCCEEEEEEHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHC
IPLDDIESGTQLDITLGRRPAPGETRPLEAIEFRARFDLALGIQRGDDGNLALLRKPIRV
CCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHEEEEEEEEECCCCCEEEEECCCCC
DDTPLRIRGTVGSSLYRSARAAGAPASAVQQYLKAVGDHADFDRAVRASDTFDMIVSYRR
CCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHH
AATGERQAGQLLYAGIERGGEAQTQLMRWGKDGRFYEASGVGEQRSGLLAPVNGPVGSRY
HCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEECCCCCHHHCCEEEECCCCCCCCC
GMRRHPILGYRRMHSGLDYRAGHGTPIRAVTDGQVTGAGRMGGCGIAVRLKHSGSLQTRY
CCCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCEECCCCCCCCEEEEEEECCCCCCHHH
CHMSRMAVRNGQNVRRGQVIGYVGSTGLSTGPHLHYEMYRNGRAINPASVNYVTRAQLSG
HHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEECCCH
DELQRFRSSLAQLKTVEAGAALVDLAPRPEERDEPEREIDKLAVAQTRQIAGGP
HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]