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The map label for this gene is mmgC [H]

Identifier: 85375446

GI number: 85375446

Start: 2636273

End: 2637982

Strand: Reverse

Name: mmgC [H]

Synonym: ELI_13095

Alternate gene names: 85375446

Gene position: 2637982-2636273 (Counterclockwise)

Preceding gene: 85375448

Following gene: 85375445

Centisome position: 86.42

GC content: 64.68

Gene sequence:

>1710_bases
TTGCTATCGATCCGCGTCAATGCGGGCATCGCGGAGCTGGCCAAGAGCGAACGCTTCGCCGCCGCCGAGCCCGACATGGT
CGAAGCCATCGTCGAAGGGGTCGGCCAGTTCGCTGCCGGCGAATTCGCCCCGCTGAATCGCGTCGGCGACCTCGAAGGTG
CCAAGCTGGAGAACGGCGTCGTGCGTCTGCCCAACGGCTTTGCCGAAGCCTATGACCAATATGTCGAGCAGGGCTGGAAC
GCGATCGCCTCGCCCGCGGAATTCGGTGGCCAGGGCCTGCCGTTCACGCTCGCCTGCAACGTGCTGGAGAACCTCGGCAC
CGCGAATATGGCGTTCAACCTGCTTCCGATGCTCTCGGTCGGCGCGATCGAAGCGATCGAGCATCACGGCAGCGAGGCGC
AGCAGTCCAGATACCTGCCCAAGCTGGTCAGCGGCGAATGGTCGGGAACGATGAACCTCACCGAGCCGCAGGCGGGAAGC
GATGTCGGGGCATTGCGGTCTACCGCCGTGCCGATCACCGAAGGCGAGCATGCGGGCAAATACCGTGTCCGGGGGCAGAA
GATCTACATCACCTGGGGCGATCACGAGCTGGCGAAGAACATCATCCACCTCGTCCTTGCGCGAACGCCCGACGCGCCGG
AGGGAAGCCGCGGCATCTCGCTTTTCCTCGTGCCCAAATATCACGTGCACGACGACGCCTCGCTGGGCCCGCGCAACGAC
CTGCGTCCCGTCAGTCTCGAGCATAAGCTCGGCATCCACGCCTCGCCCACTTGCGTCATGAGCTATGGCGACAATGACGA
ATGCATCGGCGAGCTGGTCGGCGCGGAGAATCGCGGTCTCGTGGCGATGTTTACGATGATGAACAACGCGCGGATCAATG
TCGGCAACCAAGGAGTGCAGATCGGCGAGCGCGCGACGCAGCAGGCGCTGCATTATGCCAGAGACCGCATCCAGTCGGCC
CGCGCCGGATCGCCCGACAAATCGCCGGTGGCGATCCTCGAACACCCCGATGTCCGCCGGATGCTGCTGCGCATGAAGGC
GCTGACCGAAGGCGCGCGGGCGCTGCTCTATTACACGGCAGGCCAAGTCGACCGAGGCACAATCGGCGATGAGGCCGCCA
AGGCTCGCGGCGAAATCCTCACCCCGATGATAAAGGCCTGGGGCACCGATATAGGCATCGAAATAGCCTCTATCGGCGTC
CAGGTGCATGGCGGCATGGGTTTCGTAGAGGAAACCGGCGCGGCGCAGCACTATCGCGACGCGCGCATCGCGCCGATCTA
CGAAGGCACCAACGGCATCCAGGCCGCGGACCTCGTGACCCGCAAGCTCGGGCTGGAAGACGGGCAGGCCCTCATCGGCC
TGCTCGAAGACATCGCGCGTGACGCCGCCGATGAGCCCAAGCTGTTCGCGCTTGCCGGCGATTGTGCCGCCATCGCACGT
TGGATGCGCGAGGAAGCGAGCCTTGATGATCGACTGGCCGGAAGCGTCCCCTTCACCACCATGTGCGCTGTCGCTGTCGC
TGGCTGGCAGATGCTGCAACAATTGCGCGCCGTCGCAGCAGGAGCATCCCCTGCCCTGGCAGAAACCAAGCCGGTCACTG
CCCGCTTCTTCCTCGACCGCATCGTGCCAGAAGCGAGCGGCCTCAAGGCGTCAGCCATTGCCGGGTCGGATTCGCTCTAC
GCACTCCCTGCCGACAAACTGATCGCCTGA

Upstream 100 bases:

>100_bases
CGTTCTTGTCGCGCATCCCCGAGCGCTATATCTGATACCCAGCTAAGCCAAGAGGACTTTCCGCGCCGTGACACCCTATA
CGCCCGCCACTCAGGACCAA

Downstream 100 bases:

>100_bases
GGCAGCGCTAGGGATGGCGGACCAGGGCGACCCGCTGGCACGAATTGCCGATGCCCTGGAGCGGATTGCGCCTGCGCCGT
CGGACACCAACTGGCTCGCC

Product: acyl-CoA dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MLSIRVNAGIAELAKSERFAAAEPDMVEAIVEGVGQFAAGEFAPLNRVGDLEGAKLENGVVRLPNGFAEAYDQYVEQGWN
AIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSVGAIEAIEHHGSEAQQSRYLPKLVSGEWSGTMNLTEPQAGS
DVGALRSTAVPITEGEHAGKYRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRND
LRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINVGNQGVQIGERATQQALHYARDRIQSA
RAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYTAGQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGV
QVHGGMGFVEETGAAQHYRDARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPKLFALAGDCAAIAR
WMREEASLDDRLAGSVPFTTMCAVAVAGWQMLQQLRAVAAGASPALAETKPVTARFFLDRIVPEASGLKASAIAGSDSLY
ALPADKLIA

Sequences:

>Translated_569_residues
MLSIRVNAGIAELAKSERFAAAEPDMVEAIVEGVGQFAAGEFAPLNRVGDLEGAKLENGVVRLPNGFAEAYDQYVEQGWN
AIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSVGAIEAIEHHGSEAQQSRYLPKLVSGEWSGTMNLTEPQAGS
DVGALRSTAVPITEGEHAGKYRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRND
LRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINVGNQGVQIGERATQQALHYARDRIQSA
RAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYTAGQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGV
QVHGGMGFVEETGAAQHYRDARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPKLFALAGDCAAIAR
WMREEASLDDRLAGSVPFTTMCAVAVAGWQMLQQLRAVAAGASPALAETKPVTARFFLDRIVPEASGLKASAIAGSDSLY
ALPADKLIA
>Mature_569_residues
MLSIRVNAGIAELAKSERFAAAEPDMVEAIVEGVGQFAAGEFAPLNRVGDLEGAKLENGVVRLPNGFAEAYDQYVEQGWN
AIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSVGAIEAIEHHGSEAQQSRYLPKLVSGEWSGTMNLTEPQAGS
DVGALRSTAVPITEGEHAGKYRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRND
LRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINVGNQGVQIGERATQQALHYARDRIQSA
RAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYTAGQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGV
QVHGGMGFVEETGAAQHYRDARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPKLFALAGDCAAIAR
WMREEASLDDRLAGSVPFTTMCAVAVAGWQMLQQLRAVAAGASPALAETKPVTARFFLDRIVPEASGLKASAIAGSDSLY
ALPADKLIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=410, Percent_Identity=26.0975609756098, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI4501857, Length=377, Percent_Identity=24.1379310344828, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI4557235, Length=364, Percent_Identity=28.021978021978, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI76496475, Length=364, Percent_Identity=28.021978021978, Blast_Score=105, Evalue=2e-22,
Organism=Homo sapiens, GI21361497, Length=369, Percent_Identity=26.8292682926829, Blast_Score=103, Evalue=5e-22,
Organism=Homo sapiens, GI4557233, Length=368, Percent_Identity=28.804347826087, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI226958412, Length=373, Percent_Identity=27.0777479892761, Blast_Score=97, Evalue=6e-20,
Organism=Homo sapiens, GI226958414, Length=373, Percent_Identity=27.0777479892761, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI7656849, Length=367, Percent_Identity=23.9782016348774, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI187960098, Length=361, Percent_Identity=27.7008310249307, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI4557231, Length=361, Percent_Identity=27.7008310249307, Blast_Score=79, Evalue=9e-15,
Organism=Escherichia coli, GI87082384, Length=289, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI87081958, Length=362, Percent_Identity=25.9668508287293, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1786223, Length=371, Percent_Identity=24.2587601078167, Blast_Score=68, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71985184, Length=370, Percent_Identity=26.4864864864865, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=408, Percent_Identity=26.7156862745098, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17538396, Length=413, Percent_Identity=27.1186440677966, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17506239, Length=362, Percent_Identity=25.9668508287293, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=305, Percent_Identity=30.8196721311475, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=305, Percent_Identity=30.8196721311475, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17533517, Length=421, Percent_Identity=24.9406175771971, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=413, Percent_Identity=24.455205811138, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17569725, Length=354, Percent_Identity=27.4011299435028, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71985192, Length=324, Percent_Identity=24.3827160493827, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=24.7956403269755, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=387, Percent_Identity=25.8397932816537, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=24.6031746031746, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=286, Percent_Identity=24.4755244755245, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=25.8474576271186, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=28.686327077748, Blast_Score=116, Evalue=5e-26,
Organism=Drosophila melanogaster, GI281363737, Length=367, Percent_Identity=26.4305177111717, Blast_Score=108, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24646207, Length=447, Percent_Identity=26.8456375838926, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666513, Length=411, Percent_Identity=27.007299270073, Blast_Score=99, Evalue=6e-21,
Organism=Drosophila melanogaster, GI21355753, Length=380, Percent_Identity=27.8947368421053, Blast_Score=93, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24660351, Length=389, Percent_Identity=27.2493573264781, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 60632; Mature: 60632

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSIRVNAGIAELAKSERFAAAEPDMVEAIVEGVGQFAAGEFAPLNRVGDLEGAKLENGV
CEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCE
VRLPNGFAEAYDQYVEQGWNAIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSV
EECCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
GAIEAIEHHGSEAQQSRYLPKLVSGEWSGTMNLTEPQAGSDVGALRSTAVPITEGEHAGK
HHHHHHHHCCCHHHHHHCCHHHHCCCCCCCEECCCCCCCCCHHHHHHCCCCCCCCCCCCE
YRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRND
EEECCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC
LRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINVGNQGVQ
CCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCH
IGERATQQALHYARDRIQSARAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYTA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEC
GQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGVQVHGGMGFVEETGAAQHYRD
CCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCC
ARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPKLFALAGDCAAIAR
CCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
WMREEASLDDRLAGSVPFTTMCAVAVAGWQMLQQLRAVAAGASPALAETKPVTARFFLDR
HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IVPEASGLKASAIAGSDSLYALPADKLIA
HCCCCCCCEEEEECCCCCEEECCHHHHCC
>Mature Secondary Structure
MLSIRVNAGIAELAKSERFAAAEPDMVEAIVEGVGQFAAGEFAPLNRVGDLEGAKLENGV
CEEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCE
VRLPNGFAEAYDQYVEQGWNAIASPAEFGGQGLPFTLACNVLENLGTANMAFNLLPMLSV
EECCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHH
GAIEAIEHHGSEAQQSRYLPKLVSGEWSGTMNLTEPQAGSDVGALRSTAVPITEGEHAGK
HHHHHHHHCCCHHHHHHCCHHHHCCCCCCCEECCCCCCCCCHHHHHHCCCCCCCCCCCCE
YRVRGQKIYITWGDHELAKNIIHLVLARTPDAPEGSRGISLFLVPKYHVHDDASLGPRND
EEECCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCC
LRPVSLEHKLGIHASPTCVMSYGDNDECIGELVGAENRGLVAMFTMMNNARINVGNQGVQ
CCCCCCHHCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCCH
IGERATQQALHYARDRIQSARAGSPDKSPVAILEHPDVRRMLLRMKALTEGARALLYYTA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCEEEEEEC
GQVDRGTIGDEAAKARGEILTPMIKAWGTDIGIEIASIGVQVHGGMGFVEETGAAQHYRD
CCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHCC
ARIAPIYEGTNGIQAADLVTRKLGLEDGQALIGLLEDIARDAADEPKLFALAGDCAAIAR
CCCEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHH
WMREEASLDDRLAGSVPFTTMCAVAVAGWQMLQQLRAVAAGASPALAETKPVTARFFLDR
HHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
IVPEASGLKASAIAGSDSLYALPADKLIA
HCCCCCCCEEEEECCCCCEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]