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The map label for this gene is araC [C]

Identifier: 85375388

GI number: 85375388

Start: 2584142

End: 2585053

Strand: Reverse

Name: araC [C]

Synonym: ELI_12805

Alternate gene names: 85375388

Gene position: 2585053-2584142 (Counterclockwise)

Preceding gene: 85375389

Following gene: 85375387

Centisome position: 84.69

GC content: 64.69

Gene sequence:

>912_bases
ATGGATGCCCCTTTCCGGTTCGAGTTCGTCGCTGCGCCCCGCGATCTCGCGCCGTATGTGAACACATTGTTCGTCTTCGA
GACGGACCGCGAACGGCTGGACGACATCCTGCCGGCCTATTCCGCGCAGATGATCACTTTCGGCCGGGGCCACGCCCGGA
TGCAGTTCGGCGACGATCATGTCGGCGAATCGAGCGATGCCTTCTTTCTTGCCCCGATGCAGCAGGCAGCACCTTTCTCG
ATGAAAGGACCGGTGCGCGCCTGCGGCGTCTCGCTGACGGCCCTGGGATGGGCGGCCATCGCCGATCTGCCGGTCGATAC
GTTCGGCCACCGCAGGATCGATGCAGACCGAGTATTGGGGGAAGGGTCGGCCCGGGCTATGGCTGCAATTGGCGCCGATT
TCGCGTCTGGGGAGCTGGAGGCCAAGGATGCCTGCATGCGACTGGCGGACATTGTTCGCACCAGCCTGAACCCGCCGTCG
GACAACCATGCGGATTTCATCATGCGCACCGTCGCCTGGCTCAGCGCCGACTTCAATCCGGACGTGGCGGAACTAGCCCG
CGCAACCGCCCTGTCCCCCCGGCAGGTGCAGCGATTGTGCAAGAGATTCTTCGGCAAACCTCCGGCGACACTGGTGAAGC
GGTACCGTGCCATACGCGCGGCCACGCTGCTTTCGCAGCCCGATCTCGATGCGGCGGCCAGGAACGAGGTTGAAGCGGCC
TACTTCGACCAAGCCCATATGATCCGCGACATCCGCCAGTTCACCGGGCGCACGCCGAAGCACTTCCGCACCGACGCGCC
CAGCGTGACGAGCGACACGCTCGGGCCGGAGGGATCTCTTCGGCGGAGGAAGCTGAAACGCGCTTGGAATCGATCCGGAA
CGCGCGCACAGCCGATTCCGCAGCGGCAATGA

Upstream 100 bases:

>100_bases
AATATCGACGGCTGGATCGCCCGCGAAAAGATGATGGACAAGGCGACTATGGGAGAGTGATCGCGGGTTTGACGGGGTCG
CTCGAGGACTTGCGTAACTG

Downstream 100 bases:

>100_bases
GAGAAAAATACGCATGCTTGATTTCGCGAGACGATGCTGTCGCAAGGGACCCTTTCGGACAGCGAGGAAGCCGCGATCGC
AACCGCGTTCTACGACCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MDAPFRFEFVAAPRDLAPYVNTLFVFETDRERLDDILPAYSAQMITFGRGHARMQFGDDHVGESSDAFFLAPMQQAAPFS
MKGPVRACGVSLTALGWAAIADLPVDTFGHRRIDADRVLGEGSARAMAAIGADFASGELEAKDACMRLADIVRTSLNPPS
DNHADFIMRTVAWLSADFNPDVAELARATALSPRQVQRLCKRFFGKPPATLVKRYRAIRAATLLSQPDLDAAARNEVEAA
YFDQAHMIRDIRQFTGRTPKHFRTDAPSVTSDTLGPEGSLRRRKLKRAWNRSGTRAQPIPQRQ

Sequences:

>Translated_303_residues
MDAPFRFEFVAAPRDLAPYVNTLFVFETDRERLDDILPAYSAQMITFGRGHARMQFGDDHVGESSDAFFLAPMQQAAPFS
MKGPVRACGVSLTALGWAAIADLPVDTFGHRRIDADRVLGEGSARAMAAIGADFASGELEAKDACMRLADIVRTSLNPPS
DNHADFIMRTVAWLSADFNPDVAELARATALSPRQVQRLCKRFFGKPPATLVKRYRAIRAATLLSQPDLDAAARNEVEAA
YFDQAHMIRDIRQFTGRTPKHFRTDAPSVTSDTLGPEGSLRRRKLKRAWNRSGTRAQPIPQRQ
>Mature_303_residues
MDAPFRFEFVAAPRDLAPYVNTLFVFETDRERLDDILPAYSAQMITFGRGHARMQFGDDHVGESSDAFFLAPMQQAAPFS
MKGPVRACGVSLTALGWAAIADLPVDTFGHRRIDADRVLGEGSARAMAAIGADFASGELEAKDACMRLADIVRTSLNPPS
DNHADFIMRTVAWLSADFNPDVAELARATALSPRQVQRLCKRFFGKPPATLVKRYRAIRAATLLSQPDLDAAARNEVEAA
YFDQAHMIRDIRQFTGRTPKHFRTDAPSVTSDTLGPEGSLRRRKLKRAWNRSGTRAQPIPQRQ

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33565; Mature: 33565

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPFRFEFVAAPRDLAPYVNTLFVFETDRERLDDILPAYSAQMITFGRGHARMQFGDDH
CCCCCEEEEEECCHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHEEECCCCEEEECCCCC
VGESSDAFFLAPMQQAAPFSMKGPVRACGVSLTALGWAAIADLPVDTFGHRRIDADRVLG
CCCCCCEEEECCHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC
EGSARAMAAIGADFASGELEAKDACMRLADIVRTSLNPPSDNHADFIMRTVAWLSADFNP
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
DVAELARATALSPRQVQRLCKRFFGKPPATLVKRYRAIRAATLLSQPDLDAAARNEVEAA
CHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHH
YFDQAHMIRDIRQFTGRTPKHFRTDAPSVTSDTLGPEGSLRRRKLKRAWNRSGTRAQPIP
HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
QRQ
CCC
>Mature Secondary Structure
MDAPFRFEFVAAPRDLAPYVNTLFVFETDRERLDDILPAYSAQMITFGRGHARMQFGDDH
CCCCCEEEEEECCHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHEEECCCCEEEECCCCC
VGESSDAFFLAPMQQAAPFSMKGPVRACGVSLTALGWAAIADLPVDTFGHRRIDADRVLG
CCCCCCEEEECCHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHC
EGSARAMAAIGADFASGELEAKDACMRLADIVRTSLNPPSDNHADFIMRTVAWLSADFNP
CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
DVAELARATALSPRQVQRLCKRFFGKPPATLVKRYRAIRAATLLSQPDLDAAARNEVEAA
CHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHH
YFDQAHMIRDIRQFTGRTPKHFRTDAPSVTSDTLGPEGSLRRRKLKRAWNRSGTRAQPIP
HHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
QRQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA