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The map label for this gene is yfhP [C]

Identifier: 85375385

GI number: 85375385

Start: 2582258

End: 2582668

Strand: Reverse

Name: yfhP [C]

Synonym: ELI_12790

Alternate gene names: 85375385

Gene position: 2582668-2582258 (Counterclockwise)

Preceding gene: 85375386

Following gene: 85375384

Centisome position: 84.61

GC content: 66.67

Gene sequence:

>411_bases
ATGCGCCTTAGCAACCTTGCCGATTATGCCGTGGTCACGATGAGCCACGCCGCCCGCCATTGCGGTGGCGGACGCGTGTC
GGCGGCGGAACTGGCTGCGGAAACCGGCCTGCCGGTGCCGACGGTGCAGAAGGTCGTCAGCAAGCTGACTGCGGCCGGCC
TCTTGCGCTCGGTGCGCGGGGCAGGTGGTGGGCTACAGTTGGCGCGGCCGGCGGCGGCGATCAATGTGGCGGATATCGTC
GAAGCGGTGGAGGGGCCGATCGCGCTCACCGCCTGCATCGATGGCACCGACTGCGCGGTGGACCACAATTGCACGGTCAA
ACCCCATTGGCCGCTGATCAACAATGCAATGCGCGGTGCGCTGGCGGGCATCCCGTTGACGCAGCTTGCAGCCGAGAAAG
AACTGGCATGA

Upstream 100 bases:

>100_bases
TGCTAACGACTCGCAACAAGCCAAAAATCGTTGAATTCCGGCCATTCCGCGCCTAGCTGGAAATCGGAACGATTTGGTCC
GATTTGAGTCAGTCTTGCCC

Downstream 100 bases:

>100_bases
CCGAAGAAATTGACGTCCAGGACCGTGATGCGAAGGAGGCAGCCGCCAAGGCCGCCGACTACGAGCACGGCTGGTCCAGC
GACATCGAGCAGGACTTCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRLSNLADYAVVTMSHAARHCGGGRVSAAELAAETGLPVPTVQKVVSKLTAAGLLRSVRGAGGGLQLARPAAAINVADIV
EAVEGPIALTACIDGTDCAVDHNCTVKPHWPLINNAMRGALAGIPLTQLAAEKELA

Sequences:

>Translated_136_residues
MRLSNLADYAVVTMSHAARHCGGGRVSAAELAAETGLPVPTVQKVVSKLTAAGLLRSVRGAGGGLQLARPAAAINVADIV
EAVEGPIALTACIDGTDCAVDHNCTVKPHWPLINNAMRGALAGIPLTQLAAEKELA
>Mature_136_residues
MRLSNLADYAVVTMSHAARHCGGGRVSAAELAAETGLPVPTVQKVVSKLTAAGLLRSVRGAGGGLQLARPAAAINVADIV
EAVEGPIALTACIDGTDCAVDHNCTVKPHWPLINNAMRGALAGIPLTQLAAEKELA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=135, Percent_Identity=29.6296296296296, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 13812; Mature: 13812

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSNLADYAVVTMSHAARHCGGGRVSAAELAAETGLPVPTVQKVVSKLTAAGLLRSVRG
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
AGGGLQLARPAAAINVADIVEAVEGPIALTACIDGTDCAVDHNCTVKPHWPLINNAMRGA
CCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LAGIPLTQLAAEKELA
HCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRLSNLADYAVVTMSHAARHCGGGRVSAAELAAETGLPVPTVQKVVSKLTAAGLLRSVRG
CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHC
AGGGLQLARPAAAINVADIVEAVEGPIALTACIDGTDCAVDHNCTVKPHWPLINNAMRGA
CCCCCEECCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHH
LAGIPLTQLAAEKELA
HCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9582371 [H]