Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 85375384

GI number: 85375384

Start: 2580780

End: 2582261

Strand: Reverse

Name: sufB [C]

Synonym: ELI_12785

Alternate gene names: 85375384

Gene position: 2582261-2580780 (Counterclockwise)

Preceding gene: 85375385

Following gene: 85375383

Centisome position: 84.6

GC content: 60.59

Gene sequence:

>1482_bases
ATGACCGAAGAAATTGACGTCCAGGACCGTGATGCGAAGGAGGCAGCCGCCAAGGCCGCCGACTACGAGCACGGCTGGTC
CAGCGACATCGAGCAGGACTTCGCGCCCAAGGGCCTGAATGAGGATACCGTTCGCTTCATCAGCGAGAAGAAGGGTGAGC
CGCAGTGGATGCTCGACTGGCGGCTGAAGGCGTTTCGCCTGTGGCAGACCATGGAAGAGCCGGACTGGGCCAAGCTCGGC
TATCCGAAAATCGATTACCAGGACGCCTATTACTACGCCGAACCGACCAAGAAGCCCGAGCTGGAATCGCTCGACGAGCT
CGATCCGGCGATCAAGGAAGTTTACGACAAGCTTGGCATCCCGCTGGGCGAGCAGGAAGTGCTGGCCGGGGTCAAGGGCG
CGCGCAAGGTCGCGGTCGATGCGGTGTTCGACAGCGTCAGCGTTGCCACTACGTTCCGCGAAGAGCTGAAGAAGGCGGGC
GTCATCTTCCTCTCCATCAGCGAGGCGATCCGCGAGCATCCGGAACTGGTCAAAAAGTGGCTCGGCAAGGTCGTGCCGCA
GCGCGACAACTACTTCGCCACGCTCAATTGCGCGGTCTTTTCGGACGGCACCTTCGTCTATATTCCGGAGGGCGTGCGCT
GCCCGATGGAGCTCAGCACCTATTTCCGCATCAATGCGGAGAATACCGGCCAGTTCGAACGCACATTGATCGTTGCCGAG
AAGGGCTCTTACGTCAGCTATCTCGAAGGCTGCACCGCGCCGATGCGCGACGAAAACCAGCTTCATGCCGCCGTGGTCGA
GCTGGTCGCGATGGAAGATGCCGAGATCAAGTATTCGACCGTCCAGAACTGGTATCCCGGAGACGCCGAGGGCAAGGGCG
GGATCTACAATTTCGTCACCAAGCGCGGCCTGTGCCAGGGCGCGCGCAGCAAGATCAGCTGGACGCAGGTCGAAACCGGC
TCTGCGGTGACATGGAAATATCCGAGCTGCGTGCTCAACGGCGAAGACAGCGTCGGCGAGTTCTACTCGGTTGCGGTGAC
CAACAATTACCAGCAGGCCGATACCGGCACCAAGATGATCCACAACGCGCCCGGCACGCGCAGCACGATCATTTCCAAGG
GTATCAGTGCGGGTAAGTCGAACAACACCTATCGCGGCCTCGTGCGCGTCGGGCCGAATGCGGAGAATGTCCGCAACCGC
ACCGAATGCGATTCCTTGCTGATCGGCGACCTCTGCGGCGCGCACACCGTGCCCTATATCGAGGTCAAGAACCCGAGCGC
GCAGATCGAACACGAAGCAACCACCAGCAAAGTCAGCGACGACCAGCTCTTCTACGCCATGCAGCGCGGGCTCGACGAGG
AGCAGGCGATGGCGCTGATCGTCAACGGCTTCGCGAAGGAAGTGCTGAAAGAGCTGCCGATGGAGTTTGCCGTCGAAGCG
CAGAAGCTGCTGGCGATTAGTTTGGAAGGAAGTGTCGGATGA

Upstream 100 bases:

>100_bases
ATTGCACGGTCAAACCCCATTGGCCGCTGATCAACAATGCAATGCGCGGTGCGCTGGCGGGCATCCCGTTGACGCAGCTT
GCAGCCGAGAAAGAACTGGC

Downstream 100 bases:

>100_bases
GCGAACAGAATGTGATCGAAGCCCAAGTTGTGGTCGGCCGCAATTTGGCGGATGGTGAAGCGTTAGGCCTATATCGGTTT
CACGCTATGCCGCGTGTTGA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MTEEIDVQDRDAKEAAAKAADYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDWRLKAFRLWQTMEEPDWAKLG
YPKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGIPLGEQEVLAGVKGARKVAVDAVFDSVSVATTFREELKKAG
VIFLSISEAIREHPELVKKWLGKVVPQRDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAE
KGSYVSYLEGCTAPMRDENQLHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGLCQGARSKISWTQVETG
SAVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNAPGTRSTIISKGISAGKSNNTYRGLVRVGPNAENVRNR
TECDSLLIGDLCGAHTVPYIEVKNPSAQIEHEATTSKVSDDQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEA
QKLLAISLEGSVG

Sequences:

>Translated_493_residues
MTEEIDVQDRDAKEAAAKAADYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDWRLKAFRLWQTMEEPDWAKLG
YPKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGIPLGEQEVLAGVKGARKVAVDAVFDSVSVATTFREELKKAG
VIFLSISEAIREHPELVKKWLGKVVPQRDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAE
KGSYVSYLEGCTAPMRDENQLHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGLCQGARSKISWTQVETG
SAVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNAPGTRSTIISKGISAGKSNNTYRGLVRVGPNAENVRNR
TECDSLLIGDLCGAHTVPYIEVKNPSAQIEHEATTSKVSDDQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEA
QKLLAISLEGSVG
>Mature_492_residues
TEEIDVQDRDAKEAAAKAADYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDWRLKAFRLWQTMEEPDWAKLGY
PKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGIPLGEQEVLAGVKGARKVAVDAVFDSVSVATTFREELKKAGV
IFLSISEAIREHPELVKKWLGKVVPQRDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAEK
GSYVSYLEGCTAPMRDENQLHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVTKRGLCQGARSKISWTQVETGS
AVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMIHNAPGTRSTIISKGISAGKSNNTYRGLVRVGPNAENVRNRT
ECDSLLIGDLCGAHTVPYIEVKNPSAQIEHEATTSKVSDDQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEAQ
KLLAISLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=506, Percent_Identity=58.695652173913, Blast_Score=622, Evalue=1e-179,
Organism=Escherichia coli, GI1787971, Length=153, Percent_Identity=30.0653594771242, Blast_Score=77, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 54871; Mature: 54740

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEEIDVQDRDAKEAAAKAADYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDW
CCCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHH
RLKAFRLWQTMEEPDWAKLGYPKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGI
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHCC
PLGEQEVLAGVKGARKVAVDAVFDSVSVATTFREELKKAGVIFLSISEAIREHPELVKKW
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCHHHHHHH
LGKVVPQRDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAE
HHHHCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEE
KGSYVSYLEGCTAPMRDENQLHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVT
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHH
KRGLCQGARSKISWTQVETGSAVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMI
HHHHHHHHHCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCHHCCCCHHHH
HNAPGTRSTIISKGISAGKSNNTYRGLVRVGPNAENVRNRTECDSLLIGDLCGAHTVPYI
CCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCEE
EVKNPSAQIEHEATTSKVSDDQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEA
EECCCCCCEECCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
QKLLAISLEGSVG
CCEEEEEECCCCC
>Mature Secondary Structure 
TEEIDVQDRDAKEAAAKAADYEHGWSSDIEQDFAPKGLNEDTVRFISEKKGEPQWMLDW
CCCCCCCCCCHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHCCCCCCEEEHH
RLKAFRLWQTMEEPDWAKLGYPKIDYQDAYYYAEPTKKPELESLDELDPAIKEVYDKLGI
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCHHHHHHCCHHHHHHHHHHCC
PLGEQEVLAGVKGARKVAVDAVFDSVSVATTFREELKKAGVIFLSISEAIREHPELVKKW
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCHHHHHHH
LGKVVPQRDNYFATLNCAVFSDGTFVYIPEGVRCPMELSTYFRINAENTGQFERTLIVAE
HHHHCCCCCCEEEEEEEEEECCCEEEECCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEE
KGSYVSYLEGCTAPMRDENQLHAAVVELVAMEDAEIKYSTVQNWYPGDAEGKGGIYNFVT
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCCCCCCCCCCCCHHHHHH
KRGLCQGARSKISWTQVETGSAVTWKYPSCVLNGEDSVGEFYSVAVTNNYQQADTGTKMI
HHHHHHHHHCCCEEEEEECCCEEEEECCCEEECCCCCCCCEEEEEEECCCHHCCCCHHHH
HNAPGTRSTIISKGISAGKSNNTYRGLVRVGPNAENVRNRTECDSLLIGDLCGAHTVPYI
CCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHCCCCCCCEE
EVKNPSAQIEHEATTSKVSDDQLFYAMQRGLDEEQAMALIVNGFAKEVLKELPMEFAVEA
EECCCCCCEECCHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHCC
QKLLAISLEGSVG
CCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]