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The map label for this gene is cbbE [H]

Identifier: 85375337

GI number: 85375337

Start: 2539742

End: 2540407

Strand: Reverse

Name: cbbE [H]

Synonym: ELI_12550

Alternate gene names: 85375337

Gene position: 2540407-2539742 (Counterclockwise)

Preceding gene: 85375343

Following gene: 85375336

Centisome position: 83.23

GC content: 62.46

Gene sequence:

>666_bases
ATGGTACCACCGCTGATTTCTCCTTCCATCCTGTCGGCCGACTTTGCACGGCTGGGGGAAGAAGTGCGCAGCATCGACGC
TGCGGGGGCGGACTGGATCCATGTCGACGTGATGGACGGGCATTATGTGCCCAATATTACCATCGGCCCGGCGGTTGTTA
AGGCGCTCAGGCCGCACACCGACAAGCCTTTCGACGTGCACCTGATGATTGCGCCGATCGATCCCTATCTCGAAGCCTTC
GCCGAGGCGGGGGCGGATATCATTACCGTCCATCCCGAAGCGGGCCCGCATATCCATCGCACGCTGCAGGCGATCCGCGC
GCTGGACAAGAAGGCGGGCGTGGTGCTCAATCCCGGCACGCCGGTCGAAGTGCTCGATAACCTGATGGACCTGGCCGACC
TTGTGCTGGTGATGAGCGTCAATCCGGGTTTCGGCGGGCAAAGCTTTATCGACAGCCAGCTCGGCAAGATCGAGAAGATC
CGCAAGCGCATCGACGCCACAGGGCGCGATATTCACCTTGAGGTCGATGGTGGGGTCAATCCGGACACGGCGCGCCAGTG
CGTCGATGCTGGGGCCGATGTTCTGGTAGCCGGTTCGGCCACCTTCAAGGGCGGGGAGGAGCGCTATGCCGCCAATATCC
GCGCGCTGAAGGGGCTGGAGGCATGA

Upstream 100 bases:

>100_bases
AGTGTGGATAAGGGTTGCTCCCCGTCTGCCCAGCCGAGTCCCGGCGCGCTAAGGGGGAATGCAATCCCGGCGAACCGCCC
AGCGCGAGATTGCACCTGCC

Downstream 100 bases:

>100_bases
TGGACGCGGCCACCAAGGGCGCGCCCGAGAGCGTCAATAGCGAAGCGGTTGAAGAGCAGCTCGCCATCCCCTTGTCGGAC
GGTGCCGAAGATCAGGCGCT

Product: pentose-5-phosphate-3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MVPPLISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPHTDKPFDVHLMIAPIDPYLEAF
AEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPGTPVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKI
RKRIDATGRDIHLEVDGGVNPDTARQCVDAGADVLVAGSATFKGGEERYAANIRALKGLEA

Sequences:

>Translated_221_residues
MVPPLISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPHTDKPFDVHLMIAPIDPYLEAF
AEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPGTPVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKI
RKRIDATGRDIHLEVDGGVNPDTARQCVDAGADVLVAGSATFKGGEERYAANIRALKGLEA
>Mature_221_residues
MVPPLISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPHTDKPFDVHLMIAPIDPYLEAF
AEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPGTPVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKI
RKRIDATGRDIHLEVDGGVNPDTARQCVDAGADVLVAGSATFKGGEERYAANIRALKGLEA

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=210, Percent_Identity=40.9523809523809, Blast_Score=164, Evalue=7e-41,
Organism=Homo sapiens, GI219879828, Length=210, Percent_Identity=38.5714285714286, Blast_Score=150, Evalue=8e-37,
Organism=Homo sapiens, GI24307923, Length=166, Percent_Identity=31.9277108433735, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1789788, Length=199, Percent_Identity=58.7939698492462, Blast_Score=229, Evalue=9e-62,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=40.3061224489796, Blast_Score=161, Evalue=3e-41,
Organism=Escherichia coli, GI1790754, Length=204, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=212, Percent_Identity=39.1509433962264, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6322341, Length=219, Percent_Identity=39.7260273972603, Blast_Score=167, Evalue=1e-42,
Organism=Drosophila melanogaster, GI24586301, Length=203, Percent_Identity=37.9310344827586, Blast_Score=151, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23515; Mature: 23515

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPPLISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPHT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCCC
DKPFDVHLMIAPIDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPGT
CCCEEEEEEEECCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCC
PVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKIRKRIDATGRDIHLEVDGGVN
CHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDTARQCVDAGADVLVAGSATFKGGEERYAANIRALKGLEA
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVPPLISPSILSADFARLGEEVRSIDAAGADWIHVDVMDGHYVPNITIGPAVVKALRPHT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCEEHHHHHHHHCCCC
DKPFDVHLMIAPIDPYLEAFAEAGADIITVHPEAGPHIHRTLQAIRALDKKAGVVLNPGT
CCCEEEEEEEECCCHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCC
PVEVLDNLMDLADLVLVMSVNPGFGGQSFIDSQLGKIEKIRKRIDATGRDIHLEVDGGVN
CHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
PDTARQCVDAGADVLVAGSATFKGGEERYAANIRALKGLEA
HHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA