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The map label for this gene is msrB [H]

Identifier: 85375317

GI number: 85375317

Start: 2519408

End: 2519902

Strand: Direct

Name: msrB [H]

Synonym: ELI_12450

Alternate gene names: 85375317

Gene position: 2519408-2519902 (Clockwise)

Preceding gene: 85375316

Following gene: 85375324

Centisome position: 82.54

GC content: 64.04

Gene sequence:

>495_bases
ATGACCAAAGATCCAAATCGCCGCCAGATGCTCGGTTGGTTCGGCGCGGGTGCCTCGCTCGCCGCGCTGACCGCCTGCGG
GGTTAACCCCGCACAGGCCAAGAGTTTTCCGGTGCAGAAATCCGAAGCGCAATGGCGCAAGCAGCTGACCGCGCAGGAAT
TCCGCATCCTGCGCCAGGCAGGAACCGAGCGCCCCTATTCCTCGCCGCTCGACGACCAAGAGCGGGCGGGCACCTTCGTC
TGCGCGGGCTGCAACAACCGCCTCTATTCCTCGAAGCACAAGTTCGACAGCGGCACCGGCTGGCCAAGCTTCTGGCAGCC
GATCGGTCGCGGCGCTGTCGGCACATCGACCGATTACAAGCTCGGCTATCCGCGCACCGAAGTGCATTGCGCCGATTGCG
GCGGACACCTGGGCCATATCTTCAACGACGGCCCCAAGCCGACGGGCAAGCGTCACTGCATCAACGGCGTGGCGATGGAC
TTTATTCCGGCCTAA

Upstream 100 bases:

>100_bases
CAAGCTGGAAGTCGAGGTCACCGAATTCTGAGGTGAAACCTTTCCGCGCTCCGCAGCGTATTCAGAGATGAGACATTCCC
TCTACGCTACGGAGCACCAC

Downstream 100 bases:

>100_bases
CCCGCCAGATGCGGAAGGTCTCGGGCGTATCGAGATCGACCGGCTCGAGCCAGTCCGGCGGTGTGCCATCGCGCAGGGCC
GACGCAAGGCTGCCGTCGCC

Product: putative methionine sulfoxide reductase, SelR

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MTKDPNRRQMLGWFGAGASLAALTACGVNPAQAKSFPVQKSEAQWRKQLTAQEFRILRQAGTERPYSSPLDDQERAGTFV
CAGCNNRLYSSKHKFDSGTGWPSFWQPIGRGAVGTSTDYKLGYPRTEVHCADCGGHLGHIFNDGPKPTGKRHCINGVAMD
FIPA

Sequences:

>Translated_164_residues
MTKDPNRRQMLGWFGAGASLAALTACGVNPAQAKSFPVQKSEAQWRKQLTAQEFRILRQAGTERPYSSPLDDQERAGTFV
CAGCNNRLYSSKHKFDSGTGWPSFWQPIGRGAVGTSTDYKLGYPRTEVHCADCGGHLGHIFNDGPKPTGKRHCINGVAMD
FIPA
>Mature_163_residues
TKDPNRRQMLGWFGAGASLAALTACGVNPAQAKSFPVQKSEAQWRKQLTAQEFRILRQAGTERPYSSPLDDQERAGTFVC
AGCNNRLYSSKHKFDSGTGWPSFWQPIGRGAVGTSTDYKLGYPRTEVHCADCGGHLGHIFNDGPKPTGKRHCINGVAMDF
IPA

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=147, Percent_Identity=40.8163265306122, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI301336162, Length=147, Percent_Identity=40.8163265306122, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI73089054, Length=147, Percent_Identity=40.8163265306122, Blast_Score=125, Evalue=2e-29,
Organism=Homo sapiens, GI37620216, Length=131, Percent_Identity=41.9847328244275, Blast_Score=121, Evalue=2e-28,
Organism=Homo sapiens, GI117606353, Length=135, Percent_Identity=44.4444444444444, Blast_Score=116, Evalue=8e-27,
Organism=Escherichia coli, GI1788077, Length=121, Percent_Identity=38.0165289256198, Blast_Score=111, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17553450, Length=137, Percent_Identity=38.6861313868613, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI115532676, Length=137, Percent_Identity=38.6861313868613, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6319816, Length=136, Percent_Identity=36.0294117647059, Blast_Score=102, Evalue=3e-23,
Organism=Drosophila melanogaster, GI45553335, Length=132, Percent_Identity=40.9090909090909, Blast_Score=118, Evalue=2e-27,
Organism=Drosophila melanogaster, GI21356369, Length=132, Percent_Identity=40.9090909090909, Blast_Score=118, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24645799, Length=132, Percent_Identity=40.9090909090909, Blast_Score=118, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24645801, Length=143, Percent_Identity=38.4615384615385, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24645804, Length=143, Percent_Identity=38.4615384615385, Blast_Score=115, Evalue=1e-26,
Organism=Drosophila melanogaster, GI221378664, Length=130, Percent_Identity=39.2307692307692, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI221378662, Length=137, Percent_Identity=37.956204379562, Blast_Score=114, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 17917; Mature: 17786

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKDPNRRQMLGWFGAGASLAALTACGVNPAQAKSFPVQKSEAQWRKQLTAQEFRILRQA
CCCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GTERPYSSPLDDQERAGTFVCAGCNNRLYSSKHKFDSGTGWPSFWQPIGRGAVGTSTDYK
CCCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
LGYPRTEVHCADCGGHLGHIFNDGPKPTGKRHCINGVAMDFIPA
CCCCCCEEEECCCCCCCCHHHCCCCCCCCCHHHHCCHHHHCCCC
>Mature Secondary Structure 
TKDPNRRQMLGWFGAGASLAALTACGVNPAQAKSFPVQKSEAQWRKQLTAQEFRILRQA
CCCCCHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
GTERPYSSPLDDQERAGTFVCAGCNNRLYSSKHKFDSGTGWPSFWQPIGRGAVGTSTDYK
CCCCCCCCCCCCHHHCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC
LGYPRTEVHCADCGGHLGHIFNDGPKPTGKRHCINGVAMDFIPA
CCCCCCEEEECCCCCCCCHHHCCCCCCCCCHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA