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The map label for this gene is 85375306

Identifier: 85375306

GI number: 85375306

Start: 2505088

End: 2505288

Strand: Direct

Name: 85375306

Synonym: ELI_12395

Alternate gene names: NA

Gene position: 2505088-2505288 (Clockwise)

Preceding gene: 85375305

Following gene: 85375307

Centisome position: 82.07

GC content: 60.7

Gene sequence:

>201_bases
ATGAAGAACCGCCTCAAGGTCCTGCGCGCCGAGCGCGACTGGAGCCAGCAGGACCTTGCCGATCGGCTTGGTGTTTCGCG
CCAGAGCGTGAATGCGATCGAGACGGGTCGCTACGACCCTTCGCTTCCGCTGGCGTTCAGGATTGCCGATGTATTCGCAT
TGCGGATCGAGGAGATCTTCCAGCGGGAGACGGAAGAATGA

Upstream 100 bases:

>100_bases
TGCCGCACCTGCCCGCCTATTGGTGGGCGGTCGCCTGGTTCTTCGGCCTCGCGATCGGCGCAGCGGCCAATCGCATCACC
TACGGCAGCTGGGGCGCGGT

Downstream 100 bases:

>100_bases
AACGATTGATGTTTCTTTGCGCTGCGGCGCTGGTGCTGGCCGGCTGTGCCGGGCCGATTTGCGAGACCGCGGCCGACAGG
ATGAGCGTTCCGGCAGCGTG

Product: transcriptional regulator, Cro/CI family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKNRLKVLRAERDWSQQDLADRLGVSRQSVNAIETGRYDPSLPLAFRIADVFALRIEEIFQRETEE

Sequences:

>Translated_66_residues
MKNRLKVLRAERDWSQQDLADRLGVSRQSVNAIETGRYDPSLPLAFRIADVFALRIEEIFQRETEE
>Mature_66_residues
MKNRLKVLRAERDWSQQDLADRLGVSRQSVNAIETGRYDPSLPLAFRIADVFALRIEEIFQRETEE

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7749; Mature: 7749

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNRLKVLRAERDWSQQDLADRLGVSRQSVNAIETGRYDPSLPLAFRIADVFALRIEEIF
CCCHHHHHHCCCCCCHHHHHHHHCCCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
QRETEE
HHCCCC
>Mature Secondary Structure
MKNRLKVLRAERDWSQQDLADRLGVSRQSVNAIETGRYDPSLPLAFRIADVFALRIEEIF
CCCHHHHHHCCCCCCHHHHHHHHCCCCHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
QRETEE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]