| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is phbB [H]
Identifier: 85375283
GI number: 85375283
Start: 2481908
End: 2482630
Strand: Direct
Name: phbB [H]
Synonym: ELI_12280
Alternate gene names: 85375283
Gene position: 2481908-2482630 (Clockwise)
Preceding gene: 85375282
Following gene: 85375285
Centisome position: 81.31
GC content: 63.35
Gene sequence:
>723_bases ATGGGACGAGTAGCCATCGTAACCGGCGGGACGCGCGGCATCGGGGCGGCGATTTGCAACCGCCTCAAGCGGCAGGGCCA CACGGTCATCGCCAACTATGCCGGCAACGACAATGCGGCGAAGAAATTCTCCGACGAAACGGGCATTGCGACGGCCAGAT GGGATGTCGGCGACCACGAGGCCTGCCTCGAAGGATGCGCCGCGATCGAAGCGGATCACGGGCCGATCGATATCGTCATC AACAATGCCGGGATCACCCGCGACGGCACGCTGCACAAGATGAGCTTCGACGACTGGAACGACGTCATGCGCGTCAATCT CGGCGGTTGCTTCAACATGGCCAAGGCGACCTTTCCCGGAATGCGCGAGCGTGGCTGGGGCCGGATCGTGAACATCGGCT CGATCAACGGGCAGGCGGGCCAGTACGGCCAGGTCAATTACGCTGCCGCCAAATCCGGCATTCACGGCTTTACCAAGGCG CTGGCGCAGGAAGGTGCCAAGTTCGGGGTCACCGTCAATGCCATCGCCCCGGGCTATATCGACACCGACATGGTCGCCGC CGTGCCCGAAGCGGTGCTGGAGAAGATCGTCGCCAAGATCCCGGTCGGCCGCCTCGGCATGGCCGAGGAAATCGCTCGCG GCGTAGCTTTCCTGACCAGCAAGAACGGCGGCTTCGTGACCGGGTCGACCATGAGCATCAACGGCGGCCAGCACATGTAT TGA
Upstream 100 bases:
>100_bases CACAGGCCCCGCCTCGGCGGGGTTTTTCTTTGCCCGCATCCCGCCGTGACGTTACGTCATCCTCGCAGAGCAATCGGGAA GAGCGAGAGAGGATTCGATC
Downstream 100 bases:
>100_bases GGGTGGGCGGCCGACGCCGGTTGCCTCATCCGCCTAGTCGATCACGTAGCCGACGACTTTCCAGACTGCGCCCTCTTTTT CGAGCGTGACCGACTCGGTC
Product: acetoacetyl-CoA reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MGRVAIVTGGTRGIGAAICNRLKRQGHTVIANYAGNDNAAKKFSDETGIATARWDVGDHEACLEGCAAIEADHGPIDIVI NNAGITRDGTLHKMSFDDWNDVMRVNLGGCFNMAKATFPGMRERGWGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKA LAQEGAKFGVTVNAIAPGYIDTDMVAAVPEAVLEKIVAKIPVGRLGMAEEIARGVAFLTSKNGGFVTGSTMSINGGQHMY
Sequences:
>Translated_240_residues MGRVAIVTGGTRGIGAAICNRLKRQGHTVIANYAGNDNAAKKFSDETGIATARWDVGDHEACLEGCAAIEADHGPIDIVI NNAGITRDGTLHKMSFDDWNDVMRVNLGGCFNMAKATFPGMRERGWGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKA LAQEGAKFGVTVNAIAPGYIDTDMVAAVPEAVLEKIVAKIPVGRLGMAEEIARGVAFLTSKNGGFVTGSTMSINGGQHMY >Mature_239_residues GRVAIVTGGTRGIGAAICNRLKRQGHTVIANYAGNDNAAKKFSDETGIATARWDVGDHEACLEGCAAIEADHGPIDIVIN NAGITRDGTLHKMSFDDWNDVMRVNLGGCFNMAKATFPGMRERGWGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKAL AQEGAKFGVTVNAIAPGYIDTDMVAAVPEAVLEKIVAKIPVGRLGMAEEIARGVAFLTSKNGGFVTGSTMSINGGQHMY
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=249, Percent_Identity=36.9477911646586, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=35.1239669421488, Blast_Score=129, Evalue=2e-30, Organism=Homo sapiens, GI4504505, Length=208, Percent_Identity=35.5769230769231, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI19923817, Length=253, Percent_Identity=30.8300395256917, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI32483357, Length=241, Percent_Identity=30.2904564315353, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI10190704, Length=242, Percent_Identity=33.0578512396694, Blast_Score=98, Evalue=6e-21, Organism=Homo sapiens, GI4758504, Length=256, Percent_Identity=30.46875, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI66933014, Length=242, Percent_Identity=28.5123966942149, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI109715829, Length=230, Percent_Identity=30, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=27.1966527196653, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI59889578, Length=173, Percent_Identity=32.3699421965318, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=29.2929292929293, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=27.3684210526316, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI83715985, Length=256, Percent_Identity=28.515625, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031737, Length=241, Percent_Identity=29.8755186721992, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI4503817, Length=186, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=27.8350515463918, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI4503301, Length=206, Percent_Identity=28.1553398058252, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI126723750, Length=247, Percent_Identity=27.9352226720648, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI223718074, Length=205, Percent_Identity=28.780487804878, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI7705855, Length=207, Percent_Identity=26.5700483091787, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI157739938, Length=231, Percent_Identity=27.2727272727273, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI4504503, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI226371731, Length=213, Percent_Identity=29.1079812206573, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI44680136, Length=151, Percent_Identity=29.8013245033113, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI44680133, Length=151, Percent_Identity=29.8013245033113, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI17738292, Length=151, Percent_Identity=29.8013245033113, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=31.7708333333333, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI210032110, Length=189, Percent_Identity=26.4550264550265, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=27.8606965174129, Blast_Score=66, Evalue=2e-11, Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=44.4444444444444, Blast_Score=201, Evalue=3e-53, Organism=Escherichia coli, GI87082100, Length=252, Percent_Identity=33.7301587301587, Blast_Score=130, Evalue=9e-32, Organism=Escherichia coli, GI1790717, Length=242, Percent_Identity=32.2314049586777, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=33.7552742616034, Blast_Score=118, Evalue=3e-28, Organism=Escherichia coli, GI2367175, Length=245, Percent_Identity=32.6530612244898, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI87082160, Length=241, Percent_Identity=30.2904564315353, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=31.4285714285714, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1789208, Length=243, Percent_Identity=31.2757201646091, Blast_Score=107, Evalue=7e-25, Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=28.6290322580645, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=26.6409266409266, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787820, Length=180, Percent_Identity=35, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787905, Length=242, Percent_Identity=28.5123966942149, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=24.390243902439, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786701, Length=183, Percent_Identity=27.8688524590164, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787526, Length=204, Percent_Identity=29.9019607843137, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25147288, Length=243, Percent_Identity=39.917695473251, Blast_Score=161, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=39.3700787401575, Blast_Score=159, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17568967, Length=188, Percent_Identity=37.7659574468085, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560676, Length=253, Percent_Identity=30.0395256916996, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71994604, Length=247, Percent_Identity=31.1740890688259, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71994600, Length=248, Percent_Identity=30.6451612903226, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17561402, Length=250, Percent_Identity=32, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=29.7071129707113, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.3524904214559, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI17538182, Length=251, Percent_Identity=29.0836653386454, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=29.9242424242424, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=27.6679841897233, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17561272, Length=195, Percent_Identity=32.3076923076923, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=29.2490118577075, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI193203115, Length=226, Percent_Identity=26.5486725663717, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=24.0458015267176, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193203117, Length=226, Percent_Identity=26.5486725663717, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17562904, Length=263, Percent_Identity=24.7148288973384, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=25.8687258687259, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17560332, Length=260, Percent_Identity=28.8461538461538, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=26.7441860465116, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=29.8969072164948, Blast_Score=72, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=26.3565891472868, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=24.8148148148148, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI72000259, Length=258, Percent_Identity=27.1317829457364, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562908, Length=260, Percent_Identity=24.2307692307692, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=23.8461538461538, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=26.3157894736842, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17508651, Length=246, Percent_Identity=27.6422764227642, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=26.0536398467433, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=37.5661375661376, Blast_Score=114, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=29.2, Blast_Score=79, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6320089, Length=194, Percent_Identity=28.3505154639175, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI24639444, Length=241, Percent_Identity=43.1535269709544, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI23397609, Length=245, Percent_Identity=34.2857142857143, Blast_Score=122, Evalue=2e-28, Organism=Drosophila melanogaster, GI18859837, Length=210, Percent_Identity=35.2380952380952, Blast_Score=111, Evalue=3e-25, Organism=Drosophila melanogaster, GI24644339, Length=254, Percent_Identity=29.9212598425197, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI21355319, Length=243, Percent_Identity=30.4526748971193, Blast_Score=105, Evalue=3e-23, Organism=Drosophila melanogaster, GI28571526, Length=248, Percent_Identity=30.6451612903226, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=31.7269076305221, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI24643142, Length=238, Percent_Identity=27.7310924369748, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=29.4117647058824, Blast_Score=87, Evalue=8e-18, Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=32.6633165829146, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI24584748, Length=190, Percent_Identity=31.0526315789474, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI161076933, Length=190, Percent_Identity=31.0526315789474, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24644337, Length=176, Percent_Identity=31.25, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=27.2251308900524, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI21355631, Length=168, Percent_Identity=30.952380952381, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24641232, Length=231, Percent_Identity=29.4372294372294, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI116007238, Length=183, Percent_Identity=31.6939890710383, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI21356301, Length=186, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI28574402, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24584744, Length=195, Percent_Identity=28.7179487179487, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24640492, Length=189, Percent_Identity=27.5132275132275, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24581726, Length=197, Percent_Identity=29.9492385786802, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI221331216, Length=202, Percent_Identity=28.7128712871287, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24665247, Length=202, Percent_Identity=28.7128712871287, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641388, Length=236, Percent_Identity=24.5762711864407, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=201, Percent_Identity=29.3532338308458, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665243, Length=201, Percent_Identity=29.3532338308458, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI116007234, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011283 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.36 [H]
Molecular weight: Translated: 25158; Mature: 25027
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVAIVTGGTRGIGAAICNRLKRQGHTVIANYAGNDNAAKKFSDETGIATARWDVGDHE CCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEEECCCCCHH ACLEGCAAIEADHGPIDIVINNAGITRDGTLHKMSFDDWNDVMRVNLGGCFNMAKATFPG HHHHHHHHEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHCCCC MRERGWGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKALAQEGAKFGVTVNAIAPGYI CHHCCCCEEEEEECCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCC DTDMVAAVPEAVLEKIVAKIPVGRLGMAEEIARGVAFLTSKNGGFVTGSTMSINGGQHMY CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCEEECCEEEECCCCCCC >Mature Secondary Structure GRVAIVTGGTRGIGAAICNRLKRQGHTVIANYAGNDNAAKKFSDETGIATARWDVGDHE CEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCEEEECCCCCHH ACLEGCAAIEADHGPIDIVINNAGITRDGTLHKMSFDDWNDVMRVNLGGCFNMAKATFPG HHHHHHHHEECCCCCEEEEECCCCCCCCCCEEECCCCCCCCEEEEECCCHHHHHHHCCCC MRERGWGRIVNIGSINGQAGQYGQVNYAAAKSGIHGFTKALAQEGAKFGVTVNAIAPGYI CHHCCCCEEEEEECCCCCCCCCCCEEHHHHHCCHHHHHHHHHHCCCCCCEEEEEECCCCC DTDMVAAVPEAVLEKIVAKIPVGRLGMAEEIARGVAFLTSKNGGFVTGSTMSINGGQHMY CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEEEECCCCEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2546004; 3286259 [H]