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The map label for this gene is yaeJ [C]

Identifier: 85375217

GI number: 85375217

Start: 2412317

End: 2412733

Strand: Direct

Name: yaeJ [C]

Synonym: ELI_11950

Alternate gene names: 85375217

Gene position: 2412317-2412733 (Clockwise)

Preceding gene: 85375216

Following gene: 85375218

Centisome position: 79.03

GC content: 66.91

Gene sequence:

>417_bases
ATGGATAACACGCTGCTCGACCGGGCCCATGCGCTGGCGGAAGAGAGCTTCATCGCCGGCACGGGGCCGGGCGGCCAGAA
TGCCAACAAGGTTGCGACCCAGGTGCAGCTGCGGGTCAACGTCTATGCGTTGCGCCTGCCCCCGCCGGTCTTCGCCCGGC
TGCGCGATCTCGCCGGGAGCAAGCTGACGGCCAGCGGCGACCTGCTGATCACCGCCCGCGAGCATCGCACGCAGGACGCC
AATCGCCAACTGGCCCGTGAAAAGCTCGGCGACCTGCTCGAAGCCGCGCATCGCAAGCCCAAGGCGCGCAAGAAAAGCCG
CCTGAACCGCATCGGCAAGGTCCAGCGCCTGAAAGCGAAGAAAGCGCGCGGCGAGGTCAAGGCCAAGCGGGGAAAGGTAT
CGCGTTCGGACTGGTAA

Upstream 100 bases:

>100_bases
GGCAAACCGTCCATAAGTGCCACGGCGCCGTTGCCCGCCGATTTCCTCGCGCTTGGCGCGCTCGATGGCACGAGCGATGG
TCTAAGCGATGGCCCAAGTG

Downstream 100 bases:

>100_bases
GCCTGTTCGATCTTGACTTTCGTGCCTGATTCGCCCAATTGCGCGCCCGACGAGGCGGTGCGTGCAGCGCGCCGCCCGAT
GTATTTTGGCCTCCCGCAGG

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDNTLLDRAHALAEESFIAGTGPGGQNANKVATQVQLRVNVYALRLPPPVFARLRDLAGSKLTASGDLLITAREHRTQDA
NRQLAREKLGDLLEAAHRKPKARKKSRLNRIGKVQRLKAKKARGEVKAKRGKVSRSDW

Sequences:

>Translated_138_residues
MDNTLLDRAHALAEESFIAGTGPGGQNANKVATQVQLRVNVYALRLPPPVFARLRDLAGSKLTASGDLLITAREHRTQDA
NRQLAREKLGDLLEAAHRKPKARKKSRLNRIGKVQRLKAKKARGEVKAKRGKVSRSDW
>Mature_138_residues
MDNTLLDRAHALAEESFIAGTGPGGQNANKVATQVQLRVNVYALRLPPPVFARLRDLAGSKLTASGDLLITAREHRTQDA
NRQLAREKLGDLLEAAHRKPKARKKSRLNRIGKVQRLKAKKARGEVKAKRGKVSRSDW

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=120, Percent_Identity=35, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15280; Mature: 15280

Theoretical pI: Translated: 11.86; Mature: 11.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTLLDRAHALAEESFIAGTGPGGQNANKVATQVQLRVNVYALRLPPPVFARLRDLAGS
CCCHHHHHHHHHHHHCEECCCCCCCCCHHHHHHHEEEEEEEEEEECCCHHHHHHHHHCCC
KLTASGDLLITAREHRTQDANRQLAREKLGDLLEAAHRKPKARKKSRLNRIGKVQRLKAK
CEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KARGEVKAKRGKVSRSDW
HHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDNTLLDRAHALAEESFIAGTGPGGQNANKVATQVQLRVNVYALRLPPPVFARLRDLAGS
CCCHHHHHHHHHHHHCEECCCCCCCCCHHHHHHHEEEEEEEEEEECCCHHHHHHHHHCCC
KLTASGDLLITAREHRTQDANRQLAREKLGDLLEAAHRKPKARKKSRLNRIGKVQRLKAK
CEECCCCEEEEEHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KARGEVKAKRGKVSRSDW
HHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]