| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is pbpG [H]
Identifier: 85375096
GI number: 85375096
Start: 2295336
End: 2297507
Strand: Reverse
Name: pbpG [H]
Synonym: ELI_11345
Alternate gene names: 85375096
Gene position: 2297507-2295336 (Counterclockwise)
Preceding gene: 85375097
Following gene: 85375092
Centisome position: 75.27
GC content: 64.46
Gene sequence:
>2172_bases ATGGCCAAACGCGGCAGCCGCCGGCAAGCGGCGCAGAAAGCCAGGAAAGCAGCGGCAGGCAAGCAGCCCGGCACCTTCGG TCGCTGGGTGCGCCGCATCGCCCTCTGGGGCACGGCTATCGCCGTCCTCGGCGCGCTGTTCGTGGGTCTCGCCGTCCTGT TCGCAGCACGATCGCTTCCCAGCTATTCGCAGTTGAAGGCGACCCAGAACGCGCAGACTATCGTCGTGCGCGCGCGCGAC GGGACGGAAATCCTCGAGCTCGGCCCCAGCTTCGGCGAGTGGCTCGATCACGACGAAATTCCGCAAGTGATGAAGGACGC GATGATCTCGGTCGAGGACCGTCGCTATTATTCGCATTTCGGTGTCGATCCCTACGGACTCGCGCGAGCGGTCTATACCG CCGCGACGGGCAATGGGCGTATATCGGCGACGTCGACCATCACTCAGCAGCTGGCGCGCAATATCTTCCTCAATTCCAAT CGCACGGTCGATCGCAAACTGCGAGAAGGCGTGCTCGCGCTGGCACTGGAAACGAAGTTTTCGAAGGAACAGATCCTCGA ACTCTATCTCAACAAGGTCTACTTCGGTGGCGGCGCCTACGGGATCGACAGCGCGAGCCGTAAATTTTTCAGCCATCCCG CCAGCGAGCTTACCGTCGCGGAAGCTGCGATCATCGCAGGTCTGGTCAAGGCCCCAAGCCGCTATTCGCCGACTGCCGAT GTCGACGCCGCCGTCGGACGGGCCAAGACCGTGCTGCGGCTGATGCGCGAACAGGGCCGCATTACCGCAAGCCAGGCTTC GGTCGATGTCGATGCCGTCAATCTCAAGCAGGAAGCGGGACAGAACTCCGTCCGCTATTTCACCGACTGGGCGCTACCGC AGCTCGATATCCTGTTGCCCGAAACTTTCGAGCCGATCACGGTCTGGACCACGCTCGATGTCGGCATGCAGCGCGCGGCG CAGACCTCGATAGAGGCCAATACGCCGAACGGGGCGCAGGGTGCACTCGTCAGCATGGATCGCGACGGTGCGATTCTCGC GCTCGTTGGCGGCAGCGACTATGTCGAGACGAGTTTCAACCGCGCGACGACGGCACTGCGCCAGCCGGGTTCCGCCTGGA AACTGTTCGTCTATCTCGCCGCGCTGGAAGCCGGCTACACCCCGGAAGATCGCGTCGTCGATACACCGGTCACGATAGAC GGGTGGAGCCCGCGCAATTCAGGCGGCGGCTATTCGGGCGAGATGAACCTGCGGACCGCTTTTGCCTATTCGAAGAACAC CGTCGCCGCGCAGCTCGGCAACGAGGTCGGCTTCGGTACGGTCGCGTCGATGGCGCGCCGGTTCGGGATCACTACAGAGA TTTCGACCTTCCCGGCCATGGTGCTGGGATCGAGCGAAGTCCGTCTGATCGACATGACCCGCGCGTTCGCTGCGGTGTCG GCCAAGGGCATGAGCGTCGAGCCTTACGGCATCGTCAAGGTGACGACTTCCGACGGCGAGACGCTGTATCAGCGCGAGAA GCCGCGCGAGGTGAAGCTGGTGCCGGATTATGTCGCCGCCGGTATGACCGACCTGTTGCAGGCGGCGGTCGCCACCGGCA CCGGTCGCGCCGCCCAGATCGGGCGCCCCGTGGCCGGCAAGACCGGCACGACCAGCTCCAACAAGGATGGCTATTTCGTC GGCTTCTCCAGCGGCATCACAACCGGCGTTTGGATGGGCCGCGACGACAACCGGGCCGTCGGTGGTTTGCAGGGAGGTCG CGCACCGGCGCAGGCCTTTGCCGCCTTCATGCGCTTCGCGGTGAAGGATCGCCCGCCGGAAAAATTCGAGACCGACCTGC AATTGCCGGAATGGCAGCTCGAACCCGACGACGAATTCTATTTCGGCGATCCGGACGACTATTATTATATCGACGAGCAG GGGAACCTGATCGAACCGGGACGGGTCGAAGGCCCGCGCGGCGACGGTTTCCCGGTCGAAGGCGAAACAGCGCCTGGCCC GGCCAACCGTACGCCGCCGCCCGATCCGGCGCGCGATGGCGCTCCGCAGGCGGCCAGCGACGACTTTCTCGAACGTGCCA CCGGAGGCGACAACGAGCAGCGTTCGCCGCCGCCCCGGCAGCCTGCGCAAAGGCCCCAGCCGCCGCCCGGCACAAATTCG CAGAACCGATAG
Upstream 100 bases:
>100_bases ACAGTGCCCATTCACTGCCGGTTAGCCTTCGGCCGTCCATGGGTTATAGGGGAACGGGTGCGCGGCCTAAGCGCGCGGGT GACAGGATAGTACGGAACTG
Downstream 100 bases:
>100_bases AAAAAGCCCCGCCGGATCGCTCCGACGGGGCTCTTTTTTGCTCGGTGCAATCTGTTAGCGGAAGCGCACTGCGCGGAAGG CCGTCTGCCCGCCGCGGCGG
Product: membrane carboxypeptidase
Products: NA
Alternate protein names: PBP-2D; PBP2d [H]
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MAKRGSRRQAAQKARKAAAGKQPGTFGRWVRRIALWGTAIAVLGALFVGLAVLFAARSLPSYSQLKATQNAQTIVVRARD GTEILELGPSFGEWLDHDEIPQVMKDAMISVEDRRYYSHFGVDPYGLARAVYTAATGNGRISATSTITQQLARNIFLNSN RTVDRKLREGVLALALETKFSKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELTVAEAAIIAGLVKAPSRYSPTAD VDAAVGRAKTVLRLMREQGRITASQASVDVDAVNLKQEAGQNSVRYFTDWALPQLDILLPETFEPITVWTTLDVGMQRAA QTSIEANTPNGAQGALVSMDRDGAILALVGGSDYVETSFNRATTALRQPGSAWKLFVYLAALEAGYTPEDRVVDTPVTID GWSPRNSGGGYSGEMNLRTAFAYSKNTVAAQLGNEVGFGTVASMARRFGITTEISTFPAMVLGSSEVRLIDMTRAFAAVS AKGMSVEPYGIVKVTTSDGETLYQREKPREVKLVPDYVAAGMTDLLQAAVATGTGRAAQIGRPVAGKTGTTSSNKDGYFV GFSSGITTGVWMGRDDNRAVGGLQGGRAPAQAFAAFMRFAVKDRPPEKFETDLQLPEWQLEPDDEFYFGDPDDYYYIDEQ GNLIEPGRVEGPRGDGFPVEGETAPGPANRTPPPDPARDGAPQAASDDFLERATGGDNEQRSPPPRQPAQRPQPPPGTNS QNR
Sequences:
>Translated_723_residues MAKRGSRRQAAQKARKAAAGKQPGTFGRWVRRIALWGTAIAVLGALFVGLAVLFAARSLPSYSQLKATQNAQTIVVRARD GTEILELGPSFGEWLDHDEIPQVMKDAMISVEDRRYYSHFGVDPYGLARAVYTAATGNGRISATSTITQQLARNIFLNSN RTVDRKLREGVLALALETKFSKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELTVAEAAIIAGLVKAPSRYSPTAD VDAAVGRAKTVLRLMREQGRITASQASVDVDAVNLKQEAGQNSVRYFTDWALPQLDILLPETFEPITVWTTLDVGMQRAA QTSIEANTPNGAQGALVSMDRDGAILALVGGSDYVETSFNRATTALRQPGSAWKLFVYLAALEAGYTPEDRVVDTPVTID GWSPRNSGGGYSGEMNLRTAFAYSKNTVAAQLGNEVGFGTVASMARRFGITTEISTFPAMVLGSSEVRLIDMTRAFAAVS AKGMSVEPYGIVKVTTSDGETLYQREKPREVKLVPDYVAAGMTDLLQAAVATGTGRAAQIGRPVAGKTGTTSSNKDGYFV GFSSGITTGVWMGRDDNRAVGGLQGGRAPAQAFAAFMRFAVKDRPPEKFETDLQLPEWQLEPDDEFYFGDPDDYYYIDEQ GNLIEPGRVEGPRGDGFPVEGETAPGPANRTPPPDPARDGAPQAASDDFLERATGGDNEQRSPPPRQPAQRPQPPPGTNS QNR >Mature_722_residues AKRGSRRQAAQKARKAAAGKQPGTFGRWVRRIALWGTAIAVLGALFVGLAVLFAARSLPSYSQLKATQNAQTIVVRARDG TEILELGPSFGEWLDHDEIPQVMKDAMISVEDRRYYSHFGVDPYGLARAVYTAATGNGRISATSTITQQLARNIFLNSNR TVDRKLREGVLALALETKFSKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELTVAEAAIIAGLVKAPSRYSPTADV DAAVGRAKTVLRLMREQGRITASQASVDVDAVNLKQEAGQNSVRYFTDWALPQLDILLPETFEPITVWTTLDVGMQRAAQ TSIEANTPNGAQGALVSMDRDGAILALVGGSDYVETSFNRATTALRQPGSAWKLFVYLAALEAGYTPEDRVVDTPVTIDG WSPRNSGGGYSGEMNLRTAFAYSKNTVAAQLGNEVGFGTVASMARRFGITTEISTFPAMVLGSSEVRLIDMTRAFAAVSA KGMSVEPYGIVKVTTSDGETLYQREKPREVKLVPDYVAAGMTDLLQAAVATGTGRAAQIGRPVAGKTGTTSSNKDGYFVG FSSGITTGVWMGRDDNRAVGGLQGGRAPAQAFAAFMRFAVKDRPPEKFETDLQLPEWQLEPDDEFYFGDPDDYYYIDEQG NLIEPGRVEGPRGDGFPVEGETAPGPANRTPPPDPARDGAPQAASDDFLERATGGDNEQRSPPPRQPAQRPQPPPGTNSQ NR
Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786343, Length=510, Percent_Identity=30.9803921568627, Blast_Score=198, Evalue=1e-51, Organism=Escherichia coli, GI87082258, Length=306, Percent_Identity=34.3137254901961, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1788867, Length=529, Percent_Identity=28.7334593572779, Blast_Score=162, Evalue=6e-41, Organism=Escherichia coli, GI1789601, Length=167, Percent_Identity=35.9281437125749, Blast_Score=114, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.1.129; 3.4.-.- [C]
Molecular weight: Translated: 77912; Mature: 77781
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRGSRRQAAQKARKAAAGKQPGTFGRWVRRIALWGTAIAVLGALFVGLAVLFAARSLP CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYSQLKATQNAQTIVVRARDGTEILELGPSFGEWLDHDEIPQVMKDAMISVEDRRYYSHF CHHHHHHCCCCEEEEEEECCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GVDPYGLARAVYTAATGNGRISATSTITQQLARNIFLNSNRTVDRKLREGVLALALETKF CCCHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEHHCCC SKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELTVAEAAIIAGLVKAPSRYSPTAD CHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VDAAVGRAKTVLRLMREQGRITASQASVDVDAVNLKQEAGQNSVRYFTDWALPQLDILLP HHHHHHHHHHHHHHHHHCCCEEECCCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEECC ETFEPITVWTTLDVGMQRAAQTSIEANTPNGAQGALVSMDRDGAILALVGGSDYVETSFN CCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHH RATTALRQPGSAWKLFVYLAALEAGYTPEDRVVDTPVTIDGWSPRNSGGGYSGEMNLRTA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCEEECCCCCCCCCCCCCCCEEEEEE FAYSKNTVAAQLGNEVGFGTVASMARRFGITTEISTFPAMVLGSSEVRLIDMTRAFAAVS EEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEHHHCCHHEECCCCEEEEEHHHHHHHHH AKGMSVEPYGIVKVTTSDGETLYQREKPREVKLVPDYVAAGMTDLLQAAVATGTGRAAQI CCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHC GRPVAGKTGTTSSNKDGYFVGFSSGITTGVWMGRDDNRAVGGLQGGRAPAQAFAAFMRFA CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH VKDRPPEKFETDLQLPEWQLEPDDEFYFGDPDDYYYIDEQGNLIEPGRVEGPRGDGFPVE HCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEECCCCCCCCCCCCCCCC GETAPGPANRTPPPDPARDGAPQAASDDFLERATGGDNEQRSPPPRQPAQRPQPPPGTNS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QNR CCC >Mature Secondary Structure AKRGSRRQAAQKARKAAAGKQPGTFGRWVRRIALWGTAIAVLGALFVGLAVLFAARSLP CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SYSQLKATQNAQTIVVRARDGTEILELGPSFGEWLDHDEIPQVMKDAMISVEDRRYYSHF CHHHHHHCCCCEEEEEEECCCCHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC GVDPYGLARAVYTAATGNGRISATSTITQQLARNIFLNSNRTVDRKLREGVLALALETKF CCCHHHHHHHHHEEECCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHHHCCCEEEEHHCCC SKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELTVAEAAIIAGLVKAPSRYSPTAD CHHHHHHHHHHHHEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC VDAAVGRAKTVLRLMREQGRITASQASVDVDAVNLKQEAGQNSVRYFTDWALPQLDILLP HHHHHHHHHHHHHHHHHCCCEEECCCCCCEEHHHHHHHCCCCCCEEEECCCCCCEEEECC ETFEPITVWTTLDVGMQRAAQTSIEANTPNGAQGALVSMDRDGAILALVGGSDYVETSFN CCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHH RATTALRQPGSAWKLFVYLAALEAGYTPEDRVVDTPVTIDGWSPRNSGGGYSGEMNLRTA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEECCCEEECCCCCCCCCCCCCCCEEEEEE FAYSKNTVAAQLGNEVGFGTVASMARRFGITTEISTFPAMVLGSSEVRLIDMTRAFAAVS EEECCCCHHHHHCCCCCHHHHHHHHHHHCCCEEHHHCCHHEECCCCEEEEEHHHHHHHHH AKGMSVEPYGIVKVTTSDGETLYQREKPREVKLVPDYVAAGMTDLLQAAVATGTGRAAQI CCCCCCCCCEEEEEECCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCHHHC GRPVAGKTGTTSSNKDGYFVGFSSGITTGVWMGRDDNRAVGGLQGGRAPAQAFAAFMRFA CCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH VKDRPPEKFETDLQLPEWQLEPDDEFYFGDPDDYYYIDEQGNLIEPGRVEGPRGDGFPVE HCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCEECCCCCCCCCCCCCCCC GETAPGPANRTPPPDPARDGAPQAASDDFLERATGGDNEQRSPPPRQPAQRPQPPPGTNS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC QNR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]