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The map label for this gene is ucpA [C]

Identifier: 85374538

GI number: 85374538

Start: 1749689

End: 1750498

Strand: Reverse

Name: ucpA [C]

Synonym: ELI_08555

Alternate gene names: 85374538

Gene position: 1750498-1749689 (Counterclockwise)

Preceding gene: 85374539

Following gene: 85374535

Centisome position: 57.35

GC content: 62.96

Gene sequence:

>810_bases
TTGAGCGACTTCCAAGACAAGGTCGCCGTCATCACCGGCGGCGCGAGCGGGATCGGCCTTGCCGTCGCGCGCGAACTGGT
GCGGCTAGGCGGCAGCGTCGTGCTCGCCGATGTCAACGAGCGCGCGCTCACCGATGCAAGCGAAGAATTCGGCGACAAGG
CGCTGACGCAGGTGTGCGACACCTCCGATCTCGCGCAGGTCGAAGCGCTGGCCGAGGCAGCGTTCGACTGGACAGGCCAT
GTCGATCTCGTCCTCAACAATGCCGGTCAGGGCGGCGTGCGCGGCAAGCTGTGGGACGTCGATCCCGAGGCCGCCCGCGC
GCATTTCGATGTCAATTTCTGGGGCGTCTGGAACGGCTGTCGCGTCTTCACGCCGCGCCTGATCGCGCAAGACCGCCCCA
GCGCGATCTACAATACCGGCAGTGAAAACAGCTTCTTCTGCGCGGTCCCTCAGACGGCGGCGTACATCGCCGCCAAGCAT
GCCGTGCTGGGCATGACGGAAAGCCTGCGCGAAGACTTGCCGGACCATGTCCATGCCGGCCTCATCATTCCCGGCTGGGT
ATTCACGCCGCTTGGCGAAGAGCGGTTCATGCAATTCGGCATGGACTCTGCAAAATATGCCAGGATCATCGTGCCCCAGA
TCCTGGCGAACGAGCGCTTCGTCGTCAGCCACTATTCCAACGTAAAACGCATCGAGGAGCGGATCGACCCGCTGCTCGAT
GCGTATGCGCGCAATGCGCCGCGAAACGAAGGCGACGATGCCTACGACACGCGCGATTTTATCGCCGCGCTACAAGCAAA
CCGAAATTAG

Upstream 100 bases:

>100_bases
TCCCGGCGATGGTCGTCGAAGGCAAGTTCATGATCCCCGGCGCGCAACCGCCTGAAACCTATGTCAATGTGCTGCGGCGC
GTGGCCGAGAAGACAGAGGC

Downstream 100 bases:

>100_bases
TTCGCTTCGCCTTTCTTGATTTTTTCCATGGTCTTGGGACCCTTCATCGCGTCTTCCTCGGGATTGTCCGAGCCCACGAC
CGGTTCGCGATTGTCCGGAT

Product: putative dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSDFQDKVAVITGGASGIGLAVARELVRLGGSVVLADVNERALTDASEEFGDKALTQVCDTSDLAQVEALAEAAFDWTGH
VDLVLNNAGQGGVRGKLWDVDPEAARAHFDVNFWGVWNGCRVFTPRLIAQDRPSAIYNTGSENSFFCAVPQTAAYIAAKH
AVLGMTESLREDLPDHVHAGLIIPGWVFTPLGEERFMQFGMDSAKYARIIVPQILANERFVVSHYSNVKRIEERIDPLLD
AYARNAPRNEGDDAYDTRDFIAALQANRN

Sequences:

>Translated_269_residues
MSDFQDKVAVITGGASGIGLAVARELVRLGGSVVLADVNERALTDASEEFGDKALTQVCDTSDLAQVEALAEAAFDWTGH
VDLVLNNAGQGGVRGKLWDVDPEAARAHFDVNFWGVWNGCRVFTPRLIAQDRPSAIYNTGSENSFFCAVPQTAAYIAAKH
AVLGMTESLREDLPDHVHAGLIIPGWVFTPLGEERFMQFGMDSAKYARIIVPQILANERFVVSHYSNVKRIEERIDPLLD
AYARNAPRNEGDDAYDTRDFIAALQANRN
>Mature_268_residues
SDFQDKVAVITGGASGIGLAVARELVRLGGSVVLADVNERALTDASEEFGDKALTQVCDTSDLAQVEALAEAAFDWTGHV
DLVLNNAGQGGVRGKLWDVDPEAARAHFDVNFWGVWNGCRVFTPRLIAQDRPSAIYNTGSENSFFCAVPQTAAYIAAKHA
VLGMTESLREDLPDHVHAGLIIPGWVFTPLGEERFMQFGMDSAKYARIIVPQILANERFVVSHYSNVKRIEERIDPLLDA
YARNAPRNEGDDAYDTRDFIAALQANRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4758504, Length=202, Percent_Identity=34.1584158415842, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI157739938, Length=185, Percent_Identity=28.6486486486486, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI83715985, Length=183, Percent_Identity=33.879781420765, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI20149619, Length=198, Percent_Identity=25.2525252525253, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI40807363, Length=168, Percent_Identity=31.547619047619, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI87082100, Length=196, Percent_Identity=32.1428571428571, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787905, Length=224, Percent_Identity=27.6785714285714, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17561402, Length=195, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71997402, Length=191, Percent_Identity=27.7486910994764, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17567345, Length=211, Percent_Identity=27.9620853080569, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17564282, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17737361, Length=201, Percent_Identity=31.3432835820896, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007236, Length=246, Percent_Identity=27.2357723577236, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28571526, Length=215, Percent_Identity=28.3720930232558, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357041, Length=215, Percent_Identity=26.9767441860465, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI116007238, Length=186, Percent_Identity=30.1075268817204, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 29425; Mature: 29294

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFQDKVAVITGGASGIGLAVARELVRLGGSVVLADVNERALTDASEEFGDKALTQVCD
CCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHC
TSDLAQVEALAEAAFDWTGHVDLVLNNAGQGGVRGKLWDVDPEAARAHFDVNFWGVWNGC
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHEEECEEEEEECCCC
RVFTPRLIAQDRPSAIYNTGSENSFFCAVPQTAAYIAAKHAVLGMTESLREDLPDHVHAG
EECCCHHHHCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LIIPGWVFTPLGEERFMQFGMDSAKYARIIVPQILANERFVVSHYSNVKRIEERIDPLLD
EEECCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
AYARNAPRNEGDDAYDTRDFIAALQANRN
HHHHCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDFQDKVAVITGGASGIGLAVARELVRLGGSVVLADVNERALTDASEEFGDKALTQVCD
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHC
TSDLAQVEALAEAAFDWTGHVDLVLNNAGQGGVRGKLWDVDPEAARAHFDVNFWGVWNGC
CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCHHHHHEEECEEEEEECCCC
RVFTPRLIAQDRPSAIYNTGSENSFFCAVPQTAAYIAAKHAVLGMTESLREDLPDHVHAG
EECCCHHHHCCCCCCEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
LIIPGWVFTPLGEERFMQFGMDSAKYARIIVPQILANERFVVSHYSNVKRIEERIDPLLD
EEECCEEECCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
AYARNAPRNEGDDAYDTRDFIAALQANRN
HHHHCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12950922 [H]