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The map label for this gene is 85374359

Identifier: 85374359

GI number: 85374359

Start: 1584192

End: 1585013

Strand: Reverse

Name: 85374359

Synonym: ELI_07660

Alternate gene names: NA

Gene position: 1585013-1584192 (Counterclockwise)

Preceding gene: 85374360

Following gene: 85374355

Centisome position: 51.93

GC content: 64.23

Gene sequence:

>822_bases
ATGGAAGCGCTTGCCCAGACCGCACTTGCCCTGTGCCTGAAGCTCGTCCCGCTGGCGGCCATGTTCGGCCTGCTGGCGCT
GGCGACCAAGCGCAGCGGGATCTTGGCGGCCTTCAGGAATTCGCGGCGGGAAACCGAGACCAACCTGGCGCTCGTTGTCC
TGAACTACGTATTGCTCGCCAGTTTCCTTGCCGGCGCTGCGGCCTGGTGGGCGGATACGCTGGCCGTTAGCAATAGGCTT
TTGGTATTCTGGGCCGATGCCAATCCCGTTTTCGTGCTGGCGGTGACTTTGCTCCTGAGCGAGCTGGTGATCTACTGGCG
CCACCGTATCGAGCATTCTCCGGTCCTATGGCCCATGCATGCTGTCCACCATTCCGACGAAGCGATGACGTGGCTGGCGC
TTTTACGCAAGCACCCGCTGGCCTATGTGCTGGCGCTCGTCGTCGACACCGCGCCTTTGCTGCTGCTGGGCGTGCCGGTA
TGGGCTATCGGGGCGGTGGCGCTGATGCGGATCTGGTGGGGCCATTTCATCCATGCCGACGTGCCGTGGACGCTCGGGCC
GGTCGGTCGCTGGCTCATTTCGCCCGCCGCGCACCGCCTGCACCATATCGACGATCTTGACCTTTGCGGCAGCAATTACG
GCGGTGTCCTGACGCTGTGGGACCGCGTATTCGGAACCTATATCGATCCCGCACCCTATCTGAATTGTCGTACGGGCGTC
GACGGCGGTTCGCGTGGTTTCGTCGGCGAAGTCGCGCGCCCGTTCGGGGCATGGGCCGGCCGCAAGGCCGTGGACGCTGC
GCCGGAGACGGCAAAAGCCTGA

Upstream 100 bases:

>100_bases
GGAACGGCCCGCAACCCGGCTTTCTCGGCGTTTCCGCCACCAAGTGAGCGCGGCGAAATCTTAACCACTTCTTGAGGCTG
TTTCGGGCACAAGCGCTGGC

Downstream 100 bases:

>100_bases
CCGCAGGTCCGTTTGCGTTTTTTGCAAGTTTACCAGGTTTGCCCGTATGTGCGGGCGGATTTTCCGAAAGTTTGCGCCGG
AATACGAAAGCCCCGCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Sterol Desaturase; Sterol Desaturase Family Protein; Sterol Desaturase-Like Protein; Sterol Desaturase-Related Protein; C-5 Sterol Desaturase; Transmembrane Protein; Sterol Desaturase-Like; Sterol Desaturase Protein; YhhN Family Protein; Sterol Desaturase -Like Protein; YhhN-Like Protein; Transmembrane Fatty Acid Synthesis Protein; TRAP Dicarboxylate Transporter; Sterol Desaturate; TRAP Dicarboxylate Transporter DctM Subunit; Yhhn Family Protein; Sterol Desaturase Transmembrane Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MEALAQTALALCLKLVPLAAMFGLLALATKRSGILAAFRNSRRETETNLALVVLNYVLLASFLAGAAAWWADTLAVSNRL
LVFWADANPVFVLAVTLLLSELVIYWRHRIEHSPVLWPMHAVHHSDEAMTWLALLRKHPLAYVLALVVDTAPLLLLGVPV
WAIGAVALMRIWWGHFIHADVPWTLGPVGRWLISPAAHRLHHIDDLDLCGSNYGGVLTLWDRVFGTYIDPAPYLNCRTGV
DGGSRGFVGEVARPFGAWAGRKAVDAAPETAKA

Sequences:

>Translated_273_residues
MEALAQTALALCLKLVPLAAMFGLLALATKRSGILAAFRNSRRETETNLALVVLNYVLLASFLAGAAAWWADTLAVSNRL
LVFWADANPVFVLAVTLLLSELVIYWRHRIEHSPVLWPMHAVHHSDEAMTWLALLRKHPLAYVLALVVDTAPLLLLGVPV
WAIGAVALMRIWWGHFIHADVPWTLGPVGRWLISPAAHRLHHIDDLDLCGSNYGGVLTLWDRVFGTYIDPAPYLNCRTGV
DGGSRGFVGEVARPFGAWAGRKAVDAAPETAKA
>Mature_273_residues
MEALAQTALALCLKLVPLAAMFGLLALATKRSGILAAFRNSRRETETNLALVVLNYVLLASFLAGAAAWWADTLAVSNRL
LVFWADANPVFVLAVTLLLSELVIYWRHRIEHSPVLWPMHAVHHSDEAMTWLALLRKHPLAYVLALVVDTAPLLLLGVPV
WAIGAVALMRIWWGHFIHADVPWTLGPVGRWLISPAAHRLHHIDDLDLCGSNYGGVLTLWDRVFGTYIDPAPYLNCRTGV
DGGSRGFVGEVARPFGAWAGRKAVDAAPETAKA

Specific function: Unknown

COG id: COG3000

COG function: function code I; Sterol desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI51972212, Length=125, Percent_Identity=32.8, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29886; Mature: 29886

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEALAQTALALCLKLVPLAAMFGLLALATKRSGILAAFRNSRRETETNLALVVLNYVLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFLAGAAAWWADTLAVSNRLLVFWADANPVFVLAVTLLLSELVIYWRHRIEHSPVLWPMH
HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AVHHSDEAMTWLALLRKHPLAYVLALVVDTAPLLLLGVPVWAIGAVALMRIWWGHFIHAD
HHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
VPWTLGPVGRWLISPAAHRLHHIDDLDLCGSNYGGVLTLWDRVFGTYIDPAPYLNCRTGV
CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DGGSRGFVGEVARPFGAWAGRKAVDAAPETAKA
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCC
>Mature Secondary Structure
MEALAQTALALCLKLVPLAAMFGLLALATKRSGILAAFRNSRRETETNLALVVLNYVLLA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHH
SFLAGAAAWWADTLAVSNRLLVFWADANPVFVLAVTLLLSELVIYWRHRIEHSPVLWPMH
HHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
AVHHSDEAMTWLALLRKHPLAYVLALVVDTAPLLLLGVPVWAIGAVALMRIWWGHFIHAD
HHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC
VPWTLGPVGRWLISPAAHRLHHIDDLDLCGSNYGGVLTLWDRVFGTYIDPAPYLNCRTGV
CCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
DGGSRGFVGEVARPFGAWAGRKAVDAAPETAKA
CCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA