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The map label for this gene is recN [H]

Identifier: 85374272

GI number: 85374272

Start: 1493419

End: 1495083

Strand: Reverse

Name: recN [H]

Synonym: ELI_07225

Alternate gene names: 85374272

Gene position: 1495083-1493419 (Counterclockwise)

Preceding gene: 85374273

Following gene: 85374271

Centisome position: 48.98

GC content: 68.47

Gene sequence:

>1665_bases
ATGCTGACCCGGCTTTCCATCCGCAATATCGTATTGATCGAGGCGCTGGAGCTTGACTTCGGGCGCGGGTTGGGCGTTCT
TACCGGCGAGACGGGGGCGGGCAAATCGATCCTGCTCGATGCGCTGGGGCTGGTCCTTGGCAATCGAGCGGATAGCGGAT
TGGTGCGGGCCGGAGAGGACAAGGCCAGCGTCACCGCGAGTTTCGAGTTCGCGCGCCTCCCGTCCACTCTTTCCGCAGCG
CTGGACGATGCCGACCTCGAAATCGAAGAGGGCGAGCCGCTGCTGATCCGCCGGCAGCTGAAGGCCGATGGCGGATCAAA
GGCGTTCATCAACGACCAGCCCGTCGGCGTGGCGCTGCTGCGCGAAATCGGCGGTGCGCTGGTCGAACTGCATGGCCAGC
ATGACGATCGCGGGCTCGTGAATCCGCGCGGGCACCGGGTGCTGCTCGATCGCTATGCGGGTGGTGATGTCGAGGCGGTC
GCGCAGGCGTGGACGGCGTGGCAGCGCGCCAGCGAAGCCTTGCGCAAAGCGCAAGAAGAAATCGAAGAAGCGAAAGCCGA
GCAGGACCTGCTGCTGGCGCATCTGACCGAGCTGACGACGCTCGAACCGCAGGCGGGCGAGGAGGAGCGGCTCGCCAATG
CCCGCGCCGACATGCAGAAGGGCGAGAGGCTGGCGGGCGACCTCGAGGAATTGCGCCACGTCTGGGACGGCAGCGACGCG
CCGCTGGCGCAATTGCGCAGCGCCGCGCGGCGGCTCGACCGGATCGGCGGGGAACATCCGCTGCTGGCCGAAGCGCTGGC
TTCTCTCGACCGTGCCGTGATCGAAGCGACCGAGGCCGAGGAGAAGCTGGAAGCGGCCGCCGAGGCGCTACAGCACGATC
CCGCCGCGCTCGACGCCGCCGAGACGCGGCTGTTCGAACTGCGCGCGCTGGCTCGCAAGCATCGCTGCGAAGTCGACGAA
CTGCCGCGCAAGATGCGCGAATTCCGCGCGGCACTCGATGCCATCGAAGGCGGCGAAGCGGAACTCGACGCGCTGGAGAC
CGCCGAGCGCGAGAAGGGGGAGCTCTATCGCACCGCGGCGCGGCAATTGCATGAAGCGCGGATAAATGGGGCGCAACGCT
TGGACGCGGCGGTGGCGGCGGAACTCGCGCCGCTCAAACTCGACGCCGCGCAATTCCGTACCGACGTGCAGGAACTGCCG
GCGGAGAAATGGGGCGCGGCAGGGATCGACGCGGTCGAATTCCTGATCGAGACCAACCCCGGCGCAGGCTTCGCGCCGCT
CGCCAAGATCGCTTCGGGAGGTGAGCTCTCGCGCTTCATCCTCGCGCTCAAGGTGGCGCTGGCTGAGCAGGGCGGGGCGG
CGACGGTGATCTTCGACGAGATCGACCGCGGCGTCGGCGGCGCGGTGGCGAGCGCCATCGGGGAGCGGCTCGCGCGACTG
GCGCAGGACGGGCAATTGTTGGCGGTGACGCACTCACCGCAGGTCGCGGCGCGCGGCGGCACGCACTACCGCATCGCCAA
GTCCTCCGAGGGGACGGTGACGAAGACATCGGTCGAGCGGCTGGATGAGGCCGGGCGCCAGGAAGAGATCGCGCGCATGC
TCAGCGGAGCCGAGATCACCGACGAAGCACGCGCGCAGGCGGATCGCTTGCTGGAGGGGGTGTGA

Upstream 100 bases:

>100_bases
CTCGCGCGCAAGTAAGTCATTGATTGCGCGCAACGCGGTGGAATTGCGCAATTACCAACGGTGACGCGCCGCGCGGCTTG
GTCTAGAGACTGCGGCCTGT

Downstream 100 bases:

>100_bases
TGAAACTTCGAGAACTTCTCAATCGTGCAGTGAAGCCAATTCTGAATGAAAGATTCGGAGACCTAGCGCTATCTGTCCCT
GAATTTGACGATGATGAGAA

Product: ATPase

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLTRLSIRNIVLIEALELDFGRGLGVLTGETGAGKSILLDALGLVLGNRADSGLVRAGEDKASVTASFEFARLPSTLSAA
LDDADLEIEEGEPLLIRRQLKADGGSKAFINDQPVGVALLREIGGALVELHGQHDDRGLVNPRGHRVLLDRYAGGDVEAV
AQAWTAWQRASEALRKAQEEIEEAKAEQDLLLAHLTELTTLEPQAGEEERLANARADMQKGERLAGDLEELRHVWDGSDA
PLAQLRSAARRLDRIGGEHPLLAEALASLDRAVIEATEAEEKLEAAAEALQHDPAALDAAETRLFELRALARKHRCEVDE
LPRKMREFRAALDAIEGGEAELDALETAEREKGELYRTAARQLHEARINGAQRLDAAVAAELAPLKLDAAQFRTDVQELP
AEKWGAAGIDAVEFLIETNPGAGFAPLAKIASGGELSRFILALKVALAEQGGAATVIFDEIDRGVGGAVASAIGERLARL
AQDGQLLAVTHSPQVAARGGTHYRIAKSSEGTVTKTSVERLDEAGRQEEIARMLSGAEITDEARAQADRLLEGV

Sequences:

>Translated_554_residues
MLTRLSIRNIVLIEALELDFGRGLGVLTGETGAGKSILLDALGLVLGNRADSGLVRAGEDKASVTASFEFARLPSTLSAA
LDDADLEIEEGEPLLIRRQLKADGGSKAFINDQPVGVALLREIGGALVELHGQHDDRGLVNPRGHRVLLDRYAGGDVEAV
AQAWTAWQRASEALRKAQEEIEEAKAEQDLLLAHLTELTTLEPQAGEEERLANARADMQKGERLAGDLEELRHVWDGSDA
PLAQLRSAARRLDRIGGEHPLLAEALASLDRAVIEATEAEEKLEAAAEALQHDPAALDAAETRLFELRALARKHRCEVDE
LPRKMREFRAALDAIEGGEAELDALETAEREKGELYRTAARQLHEARINGAQRLDAAVAAELAPLKLDAAQFRTDVQELP
AEKWGAAGIDAVEFLIETNPGAGFAPLAKIASGGELSRFILALKVALAEQGGAATVIFDEIDRGVGGAVASAIGERLARL
AQDGQLLAVTHSPQVAARGGTHYRIAKSSEGTVTKTSVERLDEAGRQEEIARMLSGAEITDEARAQADRLLEGV
>Mature_554_residues
MLTRLSIRNIVLIEALELDFGRGLGVLTGETGAGKSILLDALGLVLGNRADSGLVRAGEDKASVTASFEFARLPSTLSAA
LDDADLEIEEGEPLLIRRQLKADGGSKAFINDQPVGVALLREIGGALVELHGQHDDRGLVNPRGHRVLLDRYAGGDVEAV
AQAWTAWQRASEALRKAQEEIEEAKAEQDLLLAHLTELTTLEPQAGEEERLANARADMQKGERLAGDLEELRHVWDGSDA
PLAQLRSAARRLDRIGGEHPLLAEALASLDRAVIEATEAEEKLEAAAEALQHDPAALDAAETRLFELRALARKHRCEVDE
LPRKMREFRAALDAIEGGEAELDALETAEREKGELYRTAARQLHEARINGAQRLDAAVAAELAPLKLDAAQFRTDVQELP
AEKWGAAGIDAVEFLIETNPGAGFAPLAKIASGGELSRFILALKVALAEQGGAATVIFDEIDRGVGGAVASAIGERLARL
AQDGQLLAVTHSPQVAARGGTHYRIAKSSEGTVTKTSVERLDEAGRQEEIARMLSGAEITDEARAQADRLLEGV

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=564, Percent_Identity=35.2836879432624, Blast_Score=311, Evalue=8e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 59346; Mature: 59346

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTRLSIRNIVLIEALELDFGRGLGVLTGETGAGKSILLDALGLVLGNRADSGLVRAGED
CCCCCCCCCEEEEEEEHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCC
KASVTASFEFARLPSTLSAALDDADLEIEEGEPLLIRRQLKADGGSKAFINDQPVGVALL
CHHEEEEEHHHHCCHHHHHHHCCCCCEECCCCCEEEHHHHCCCCCCCCEECCCCHHHHHH
REIGGALVELHGQHDDRGLVNPRGHRVLLDRYAGGDVEAVAQAWTAWQRASEALRKAQEE
HHHCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEEAKAEQDLLLAHLTELTTLEPQAGEEERLANARADMQKGERLAGDLEELRHVWDGSDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLAQLRSAARRLDRIGGEHPLLAEALASLDRAVIEATEAEEKLEAAAEALQHDPAALDAA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ETRLFELRALARKHRCEVDELPRKMREFRAALDAIEGGEAELDALETAEREKGELYRTAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RQLHEARINGAQRLDAAVAAELAPLKLDAAQFRTDVQELPAEKWGAAGIDAVEFLIETNP
HHHHHHHHCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCHHHCCCCCHHHHHHHEECCC
GAGFAPLAKIASGGELSRFILALKVALAEQGGAATVIFDEIDRGVGGAVASAIGERLARL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHH
AQDGQLLAVTHSPQVAARGGTHYRIAKSSEGTVTKTSVERLDEAGRQEEIARMLSGAEIT
HCCCCEEEEECCCCCEECCCCEEEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCC
DEARAQADRLLEGV
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLTRLSIRNIVLIEALELDFGRGLGVLTGETGAGKSILLDALGLVLGNRADSGLVRAGED
CCCCCCCCCEEEEEEEHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEECCCC
KASVTASFEFARLPSTLSAALDDADLEIEEGEPLLIRRQLKADGGSKAFINDQPVGVALL
CHHEEEEEHHHHCCHHHHHHHCCCCCEECCCCCEEEHHHHCCCCCCCCEECCCCHHHHHH
REIGGALVELHGQHDDRGLVNPRGHRVLLDRYAGGDVEAVAQAWTAWQRASEALRKAQEE
HHHCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEEAKAEQDLLLAHLTELTTLEPQAGEEERLANARADMQKGERLAGDLEELRHVWDGSDA
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PLAQLRSAARRLDRIGGEHPLLAEALASLDRAVIEATEAEEKLEAAAEALQHDPAALDAA
CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ETRLFELRALARKHRCEVDELPRKMREFRAALDAIEGGEAELDALETAEREKGELYRTAA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RQLHEARINGAQRLDAAVAAELAPLKLDAAQFRTDVQELPAEKWGAAGIDAVEFLIETNP
HHHHHHHHCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCHHHCCCCCHHHHHHHEECCC
GAGFAPLAKIASGGELSRFILALKVALAEQGGAATVIFDEIDRGVGGAVASAIGERLARL
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCHHHHHHHHHHHHHH
AQDGQLLAVTHSPQVAARGGTHYRIAKSSEGTVTKTSVERLDEAGRQEEIARMLSGAEIT
HCCCCEEEEECCCCCEECCCCEEEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHCCCCCC
DEARAQADRLLEGV
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]