| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is yjeF [H]
Identifier: 85374207
GI number: 85374207
Start: 1430852
End: 1432258
Strand: Reverse
Name: yjeF [H]
Synonym: ELI_06900
Alternate gene names: 85374207
Gene position: 1432258-1430852 (Counterclockwise)
Preceding gene: 85374208
Following gene: 85374206
Centisome position: 46.92
GC content: 66.88
Gene sequence:
>1407_bases ATGCCGAATAGCGCCAATCTCAGGCAGGTCCTTACCGTCGCCGAAATGCAGGCGGCGGAACGGGATCTGATGGATGCTGG CATTTCCGTCCACGAACTGATGCAGCGCGCCGGCCAAGGGGCCGCCGACTGGATCTGGCGGATGACCGGCGGCAGGCCCG TCACCGTGTTGTGCGGCCCCGGTAACAATGGCGGCGATGGCTATGTCATCGCGGCGGAAATTGCGCGCCGCGGTGGCGAA GTAAGGGTCGTCGCACCGATGCCGCCAAAGACCGAAGCAGCGAAGCGGGCCGCCGAGACATTCAAGGGCAAGGTCACCAC ATCGGGCGAAGGCTTGCGCGGGGAAGTGCTGGTCGATTGTCTGTTCGGCAGCGGCCTCTCGCGACCGCTCTCAGCCGAGC ATCGCGCGCTGCTTCGGCGGTTGCGAATGGAGCACGCGCTCGGCGTCGCAATCGACGTCGCCAGCGGCGTCGACGCGGAC AGCGGCGCGTGGCCCGAAGGCATGGCGGCGTGGGACTGTACCATCGCATTGGGAGCGTGGAAGCGCGCGCACTGGATCGG CGAAGCGTCGGCGAAATGCGGCACCCGCAAACTGGTCGATATCGGCGTGGCCGCGCGATCCGAAGACGAGCAGTTGGCGC CCGAGCCGGACTTCGCCCGCCCGGCATGGGATGCCCACAAATATCGCCGCGGCCTGCTCGCAGTCGTGGGGGGTGCCATG CCCGGAGCCAGCGAACTGGCTGCCTGCGCAGCGGTGGGTGCCGGGGCGGGCTATGTGAAGCTGCTCGGGAGTGACAATTC AAGGCGACAGCTTCCGCCAGATCTGGTCGAGAAAAACGGCGACCTGACTGAACTTCTCAGCGACGAGCGCATCAGCGCTA TCCTCGTCGGTCCGGGGCTTGGCCGCGGCGAAGAGGCACGCGATCGTCTGGCTCACGCGCTTGCGGAAGGCGAGCCGACC GTTTGCGATGCCGATGCGCTTCATTTGCTCGATGACGAGATGCTCGACGGCGTCGATGGCACGAAAATCATCGTCACTCC GCACGAGGGCGAGCTCGCGCAATTGTGCAAGAACTTCGGCGTTATCGCTGCATCGAAGCGGGAACGGGCTATGGCCGTGC ACAGCCGCACCGGTTTGACGGTGCTGGCCAAGGGACCCGACACGATCCTCGCCCACGACGGGGGCGTGGCCTACTTCCCG CAAGGGTCGAGCTGGCTGTCGGTGGCCGGCAGCGGCGATGTGCTTGCCGGCATCGTCGCTTCCCGGCTGGCGACAGGCGA CACGCCCGCCCGGGCCGCGATGGCGGGAGTGTATCTGCACCAACAGGCGGCGCGCGAGGCTGCGGGGCCTTTCTCCGCCA GCGATCTGGCGCAAGCGATCCCAGCCGCCTATCGCGCCTTTCTGTGA
Upstream 100 bases:
>100_bases GTGCCGCATGACGGAGCCGAAGGCGCGGTGAATACGCTCGACGGCGATATCCTTCAGGTTGCCGTCGGAGAAGATCGCTA TCGCTTCCCGGCGCAGGCGA
Downstream 100 bases:
>100_bases CCATAGCCGAACCAATCGTCCGCATCGCCGCGCGCGGTGACGGCGTGACCGAGAGTGGTCGCCACGTCGCGGGCGGCGTA CCGGGTGACTGCGTGCGCGA
Product: sugar kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPNSANLRQVLTVAEMQAAERDLMDAGISVHELMQRAGQGAADWIWRMTGGRPVTVLCGPGNNGGDGYVIAAEIARRGGE VRVVAPMPPKTEAAKRAAETFKGKVTTSGEGLRGEVLVDCLFGSGLSRPLSAEHRALLRRLRMEHALGVAIDVASGVDAD SGAWPEGMAAWDCTIALGAWKRAHWIGEASAKCGTRKLVDIGVAARSEDEQLAPEPDFARPAWDAHKYRRGLLAVVGGAM PGASELAACAAVGAGAGYVKLLGSDNSRRQLPPDLVEKNGDLTELLSDERISAILVGPGLGRGEEARDRLAHALAEGEPT VCDADALHLLDDEMLDGVDGTKIIVTPHEGELAQLCKNFGVIAASKRERAMAVHSRTGLTVLAKGPDTILAHDGGVAYFP QGSSWLSVAGSGDVLAGIVASRLATGDTPARAAMAGVYLHQQAAREAAGPFSASDLAQAIPAAYRAFL
Sequences:
>Translated_468_residues MPNSANLRQVLTVAEMQAAERDLMDAGISVHELMQRAGQGAADWIWRMTGGRPVTVLCGPGNNGGDGYVIAAEIARRGGE VRVVAPMPPKTEAAKRAAETFKGKVTTSGEGLRGEVLVDCLFGSGLSRPLSAEHRALLRRLRMEHALGVAIDVASGVDAD SGAWPEGMAAWDCTIALGAWKRAHWIGEASAKCGTRKLVDIGVAARSEDEQLAPEPDFARPAWDAHKYRRGLLAVVGGAM PGASELAACAAVGAGAGYVKLLGSDNSRRQLPPDLVEKNGDLTELLSDERISAILVGPGLGRGEEARDRLAHALAEGEPT VCDADALHLLDDEMLDGVDGTKIIVTPHEGELAQLCKNFGVIAASKRERAMAVHSRTGLTVLAKGPDTILAHDGGVAYFP QGSSWLSVAGSGDVLAGIVASRLATGDTPARAAMAGVYLHQQAAREAAGPFSASDLAQAIPAAYRAFL >Mature_467_residues PNSANLRQVLTVAEMQAAERDLMDAGISVHELMQRAGQGAADWIWRMTGGRPVTVLCGPGNNGGDGYVIAAEIARRGGEV RVVAPMPPKTEAAKRAAETFKGKVTTSGEGLRGEVLVDCLFGSGLSRPLSAEHRALLRRLRMEHALGVAIDVASGVDADS GAWPEGMAAWDCTIALGAWKRAHWIGEASAKCGTRKLVDIGVAARSEDEQLAPEPDFARPAWDAHKYRRGLLAVVGGAMP GASELAACAAVGAGAGYVKLLGSDNSRRQLPPDLVEKNGDLTELLSDERISAILVGPGLGRGEEARDRLAHALAEGEPTV CDADALHLLDDEMLDGVDGTKIIVTPHEGELAQLCKNFGVIAASKRERAMAVHSRTGLTVLAKGPDTILAHDGGVAYFPQ GSSWLSVAGSGDVLAGIVASRLATGDTPARAAMAGVYLHQQAAREAAGPFSASDLAQAIPAAYRAFL
Specific function: Unknown
COG id: COG0062
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1790609, Length=467, Percent_Identity=31.0492505353319, Blast_Score=131, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 [H]
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]
EC number: NA
Molecular weight: Translated: 48832; Mature: 48701
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS01050 UPF0031_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNSANLRQVLTVAEMQAAERDLMDAGISVHELMQRAGQGAADWIWRMTGGRPVTVLCGP CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEECCCCEEEEEECC GNNGGDGYVIAAEIARRGGEVRVVAPMPPKTEAAKRAAETFKGKVTTSGEGLRGEVLVDC CCCCCCCEEEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHEEEEE LFGSGLSRPLSAEHRALLRRLRMEHALGVAIDVASGVDADSGAWPEGMAAWDCTIALGAW HHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC KRAHWIGEASAKCGTRKLVDIGVAARSEDEQLAPEPDFARPAWDAHKYRRGLLAVVGGAM HHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PGASELAACAAVGAGAGYVKLLGSDNSRRQLPPDLVEKNGDLTELLSDERISAILVGPGL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCC GRGEEARDRLAHALAEGEPTVCDADALHLLDDEMLDGVDGTKIIVTPHEGELAQLCKNFG CCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC VIAASKRERAMAVHSRTGLTVLAKGPDTILAHDGGVAYFPQGSSWLSVAGSGDVLAGIVA EEEECCCHHHHHEECCCCEEEEECCCCEEEEECCCEEECCCCCCEEEECCCCHHHHHHHH SRLATGDTPARAAMAGVYLHQQAAREAAGPFSASDLAQAIPAAYRAFL HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PNSANLRQVLTVAEMQAAERDLMDAGISVHELMQRAGQGAADWIWRMTGGRPVTVLCGP CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEECCCCEEEEEECC GNNGGDGYVIAAEIARRGGEVRVVAPMPPKTEAAKRAAETFKGKVTTSGEGLRGEVLVDC CCCCCCCEEEEEHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECCCCCCHHEEEEE LFGSGLSRPLSAEHRALLRRLRMEHALGVAIDVASGVDADSGAWPEGMAAWDCTIALGAW HHCCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCEEEEEEEEECCC KRAHWIGEASAKCGTRKLVDIGVAARSEDEQLAPEPDFARPAWDAHKYRRGLLAVVGGAM HHHHHCCCHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC PGASELAACAAVGAGAGYVKLLGSDNSRRQLPPDLVEKNGDLTELLSDERISAILVGPGL CCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCHHHHHCCCCEEEEEECCCC GRGEEARDRLAHALAEGEPTVCDADALHLLDDEMLDGVDGTKIIVTPHEGELAQLCKNFG CCCHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCC VIAASKRERAMAVHSRTGLTVLAKGPDTILAHDGGVAYFPQGSSWLSVAGSGDVLAGIVA EEEECCCHHHHHEECCCCEEEEECCCCEEEEECCCEEECCCCCCEEEECCCCHHHHHHHH SRLATGDTPARAAMAGVYLHQQAAREAAGPFSASDLAQAIPAAYRAFL HHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 7511774 [H]