| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is engD [H]
Identifier: 85373990
GI number: 85373990
Start: 1200776
End: 1201876
Strand: Reverse
Name: engD [H]
Synonym: ELI_05815
Alternate gene names: 85373990
Gene position: 1201876-1200776 (Counterclockwise)
Preceding gene: 85373991
Following gene: 85373989
Centisome position: 39.37
GC content: 63.94
Gene sequence:
>1101_bases ATGGGTTTCCGTTGCGGGATCGTCGGCCTGCCGAATGTCGGCAAGTCCACCCTGTTCAATGCATTGACCGAGACGCAGGC CGCGCAGGCTGCGAACTATCCCTTCTGCACGATCGAGCCCAATGTCGGGCAGGTCGCGGTGCCTGACGAGCGGCTCGACA AGATCGCCGCCATCGCCAAGTCGGCCAAGGTGATCGCCACGCAGCTCGCCTTCGTCGACATCGCGGGGCTCGTCAAAGGG GCGAGCCAGGGCGAAGGCCTCGGCAACCAGTTCCTCGGCAACATCCGCGAGGTCGATGCCATCGTGCACGTCCTGCGCTG CTTCGAGGATGACGACATCCAGCATGTCAGCAACCGCGTCGATCCGCTGGCCGATGCCGAAGTGGTGGAGACCGAGCTGA TGCTGGCCGACCTCGAAAGCCTCGAAAAGCGCGTGCCCAACGCGGAGAAACGCGCCACCGCCGGGGACAAGGAAGCCAAG CTGACCGCCAGCGTGCTCGGTCAGGCGCTGGAATTGCTGCGCGAAGGCAAACCGGCGCGGCTGACCGAGCCGAAGGACGA CGAGGAAGCGCGCATCTTCCAGCAGGCGCAGTTACTGACCGCGAAGCCGGTGCTCTATGTCTGCAATGTCGCCGAGGAAG ATGCGGCCGAGGGTAACGACCTGTCGGCCCAAGTCTTTGCCAAGGCCGATGCCGAGGGCGCACAGGCGGTCGTCGTCTCC GCCGCGATCGAGGCCGAGCTGGTCGGCATGGAGCCAGAAGACCGCGCCGAATATCTCGCAGAACTGGGCCTCAAGGAAAG CGGCCTCGCCCGGGTAATCCGCGCCGGATACACGCTGCTGGGTTTGCAGACTTTCTTCACCGCTGGCCCCAAGGAATCGC GGGCGTGGACTTTCCCGACCGGCGCCAAGGCCCCGCAAGCGGCGGGTGAAATCCATACCGACTTCGAAAAGGGCTTCATC CGCGCCGAGACCATTGCTTACGACGACTACGTTTCGCTGGGTGGCGAGGCGGCAGCGCGTGAAGCGGGCAAGCTACGCCA GGAGGGCAAGGAATATCTCGTCCAAGACGGCGACGTAATGCTCTTCAAATTCAACGTTTAG
Upstream 100 bases:
>100_bases GAGAGCCGGCTGGGGCCGATGATTACCGCCGTTCACAGGCGCTAGCCATCGGGCGGGCATCCCGCTAAGGGGCGCGCCAC ACAGTTTTCCGGAGTATGAG
Downstream 100 bases:
>100_bases GGACCTTTACCGGCCCTCGCTCGTAGCATTCCCCGAGAGACAATTCGGGGAGAGTGAGCGTGGTAGACAAGTCGGAAAAG TTCAACTGGTTCGTCCGTGT
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAKSAKVIATQLAFVDIAGLVKG ASQGEGLGNQFLGNIREVDAIVHVLRCFEDDDIQHVSNRVDPLADAEVVETELMLADLESLEKRVPNAEKRATAGDKEAK LTASVLGQALELLREGKPARLTEPKDDEEARIFQQAQLLTAKPVLYVCNVAEEDAAEGNDLSAQVFAKADAEGAQAVVVS AAIEAELVGMEPEDRAEYLAELGLKESGLARVIRAGYTLLGLQTFFTAGPKESRAWTFPTGAKAPQAAGEIHTDFEKGFI RAETIAYDDYVSLGGEAAAREAGKLRQEGKEYLVQDGDVMLFKFNV
Sequences:
>Translated_366_residues MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAKSAKVIATQLAFVDIAGLVKG ASQGEGLGNQFLGNIREVDAIVHVLRCFEDDDIQHVSNRVDPLADAEVVETELMLADLESLEKRVPNAEKRATAGDKEAK LTASVLGQALELLREGKPARLTEPKDDEEARIFQQAQLLTAKPVLYVCNVAEEDAAEGNDLSAQVFAKADAEGAQAVVVS AAIEAELVGMEPEDRAEYLAELGLKESGLARVIRAGYTLLGLQTFFTAGPKESRAWTFPTGAKAPQAAGEIHTDFEKGFI RAETIAYDDYVSLGGEAAAREAGKLRQEGKEYLVQDGDVMLFKFNV >Mature_365_residues GFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAKSAKVIATQLAFVDIAGLVKGA SQGEGLGNQFLGNIREVDAIVHVLRCFEDDDIQHVSNRVDPLADAEVVETELMLADLESLEKRVPNAEKRATAGDKEAKL TASVLGQALELLREGKPARLTEPKDDEEARIFQQAQLLTAKPVLYVCNVAEEDAAEGNDLSAQVFAKADAEGAQAVVVSA AIEAELVGMEPEDRAEYLAELGLKESGLARVIRAGYTLLGLQTFFTAGPKESRAWTFPTGAKAPQAAGEIHTDFEKGFIR AETIAYDDYVSLGGEAAAREAGKLRQEGKEYLVQDGDVMLFKFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=369, Percent_Identity=45.2574525745258, Blast_Score=323, Evalue=2e-88, Organism=Homo sapiens, GI58761502, Length=216, Percent_Identity=39.8148148148148, Blast_Score=171, Evalue=1e-42, Organism=Escherichia coli, GI1787454, Length=366, Percent_Identity=57.3770491803279, Blast_Score=414, Evalue=1e-117, Organism=Escherichia coli, GI1789574, Length=128, Percent_Identity=29.6875, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17509631, Length=368, Percent_Identity=45.1086956521739, Blast_Score=313, Evalue=9e-86, Organism=Saccharomyces cerevisiae, GI6319499, Length=371, Percent_Identity=40.4312668463612, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6321773, Length=382, Percent_Identity=36.6492146596859, Blast_Score=225, Evalue=8e-60, Organism=Saccharomyces cerevisiae, GI6321649, Length=265, Percent_Identity=31.6981132075472, Blast_Score=92, Evalue=1e-19, Organism=Drosophila melanogaster, GI24640873, Length=368, Percent_Identity=44.5652173913043, Blast_Score=301, Evalue=3e-82, Organism=Drosophila melanogaster, GI24640877, Length=368, Percent_Identity=44.5652173913043, Blast_Score=301, Evalue=3e-82, Organism=Drosophila melanogaster, GI24640875, Length=368, Percent_Identity=44.5652173913043, Blast_Score=301, Evalue=3e-82, Organism=Drosophila melanogaster, GI24640879, Length=326, Percent_Identity=42.0245398773006, Blast_Score=245, Evalue=4e-65,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39241; Mature: 39109
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAK CCEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCHHHHHHHHHHHH SAKVIATQLAFVDIAGLVKGASQGEGLGNQFLGNIREVDAIVHVLRCFEDDDIQHVSNRV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC DPLADAEVVETELMLADLESLEKRVPNAEKRATAGDKEAKLTASVLGQALELLREGKPAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LTEPKDDEEARIFQQAQLLTAKPVLYVCNVAEEDAAEGNDLSAQVFAKADAEGAQAVVVS CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEEEEE AAIEAELVGMEPEDRAEYLAELGLKESGLARVIRAGYTLLGLQTFFTAGPKESRAWTFPT EHHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEECCC GAKAPQAAGEIHTDFEKGFIRAETIAYDDYVSLGGEAAAREAGKLRQEGKEYLVQDGDVM CCCCCCCCCCHHHHHHHCCEEEEHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEE LFKFNV EEEECC >Mature Secondary Structure GFRCGIVGLPNVGKSTLFNALTETQAAQAANYPFCTIEPNVGQVAVPDERLDKIAAIAK CEEECEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCHHHHHHHHHHHH SAKVIATQLAFVDIAGLVKGASQGEGLGNQFLGNIREVDAIVHVLRCFEDDDIQHVSNRV HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC DPLADAEVVETELMLADLESLEKRVPNAEKRATAGDKEAKLTASVLGQALELLREGKPAR CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC LTEPKDDEEARIFQQAQLLTAKPVLYVCNVAEEDAAEGNDLSAQVFAKADAEGAQAVVVS CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCEEEEEECCCCCCCEEEEE AAIEAELVGMEPEDRAEYLAELGLKESGLARVIRAGYTLLGLQTFFTAGPKESRAWTFPT EHHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEECCC GAKAPQAAGEIHTDFEKGFIRAETIAYDDYVSLGGEAAAREAGKLRQEGKEYLVQDGDVM CCCCCCCCCCHHHHHHHCCEEEEHEEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEE LFKFNV EEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA