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The map label for this gene is yadH [H]

Identifier: 85373947

GI number: 85373947

Start: 1160160

End: 1160924

Strand: Direct

Name: yadH [H]

Synonym: ELI_05600

Alternate gene names: 85373947

Gene position: 1160160-1160924 (Clockwise)

Preceding gene: 85373946

Following gene: 85373948

Centisome position: 38.01

GC content: 58.95

Gene sequence:

>765_bases
ATGATCAGCTGGCGTTCCACCTGGGCGATTTACAAGCGCGAGTTGATGCGCTTTCTGCGCACAGCCTTCCAATCCGTGCT
GGCACCGGTTCTGACCACTTCGCTCTATTTCATCGTTTTCGGCGCGGCCATCGGCAGCCGAATGCCCGACCTTGGCGGGG
TAGAATACGGAGCTTTCATCATACCGGGCCTGCTGATGCTCACCCTGCTCGGCGAGACGACCAGCAATTCCAGTTTCGGC
ATCTACATGCCCCGCTTCACCGGCACGATCTACGAACTTCTCTCGGCACCCGTCGGGGTGGCGGAAACACTCGTCGGCTT
CGTAGGGGCCGCTGCCACCAAGAGCCTGATCCTGACGGCGATCATCTTGCTCACTGCCGCGATCTTCGTCGATTACTCGA
TCGCCCATCCGCTCTGGGCCTTCGTCTTCGTCCTGCTTGTGGCGTGTAGCTTCAGCCTGTTCGGCTTCATCCTCGGTATC
TGGGCGGACAATTTCGAGAAGTTGGGCATTATCCCGCTGCTGTTCCTGACCCCGCTGACCTTTCTTGGCGGCACTTTCTA
TTCGATCGACATGCTGCCCGAACCCTGGGACACGATCGCACTGGCCAACCCCATCGTCTATCTGGTGAGCGGATTGCGCT
GGACATTCTACGGCAGCAGTGACGTCGATTTCCGCATATCCCTCGGGATCACGGTGGCATTCCTTGCCGTCTGCGTCGGT
ATCATCGCCTTCATCTTCAAGACCGGGTGGCGGCTTCGGGACTAG

Upstream 100 bases:

>100_bases
CGCTGGTGGACGAGAGTATCGACTTTACCGGCATCGACACGCGCGAAAGCAGCCTCGAGGAAATCTTCGTCTCGCTCCTC
GGTGAGAAGGAGGTGGCGGC

Downstream 100 bases:

>100_bases
TTTCCGCGCGGCACACGCGCTAGGCGCGCCGCCAATGACCAAACCCCGCTTCGACTTCACGATCCACGCGACCGACGGCA
AGGCGCGCACCGGCACCATC

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MISWRSTWAIYKRELMRFLRTAFQSVLAPVLTTSLYFIVFGAAIGSRMPDLGGVEYGAFIIPGLLMLTLLGETTSNSSFG
IYMPRFTGTIYELLSAPVGVAETLVGFVGAAATKSLILTAIILLTAAIFVDYSIAHPLWAFVFVLLVACSFSLFGFILGI
WADNFEKLGIIPLLFLTPLTFLGGTFYSIDMLPEPWDTIALANPIVYLVSGLRWTFYGSSDVDFRISLGITVAFLAVCVG
IIAFIFKTGWRLRD

Sequences:

>Translated_254_residues
MISWRSTWAIYKRELMRFLRTAFQSVLAPVLTTSLYFIVFGAAIGSRMPDLGGVEYGAFIIPGLLMLTLLGETTSNSSFG
IYMPRFTGTIYELLSAPVGVAETLVGFVGAAATKSLILTAIILLTAAIFVDYSIAHPLWAFVFVLLVACSFSLFGFILGI
WADNFEKLGIIPLLFLTPLTFLGGTFYSIDMLPEPWDTIALANPIVYLVSGLRWTFYGSSDVDFRISLGITVAFLAVCVG
IIAFIFKTGWRLRD
>Mature_254_residues
MISWRSTWAIYKRELMRFLRTAFQSVLAPVLTTSLYFIVFGAAIGSRMPDLGGVEYGAFIIPGLLMLTLLGETTSNSSFG
IYMPRFTGTIYELLSAPVGVAETLVGFVGAAATKSLILTAIILLTAAIFVDYSIAHPLWAFVFVLLVACSFSLFGFILGI
WADNFEKLGIIPLLFLTPLTFLGGTFYSIDMLPEPWDTIALANPIVYLVSGLRWTFYGSSDVDFRISLGITVAFLAVCVG
IIAFIFKTGWRLRD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=253, Percent_Identity=35.9683794466403, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27910; Mature: 27910

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISWRSTWAIYKRELMRFLRTAFQSVLAPVLTTSLYFIVFGAAIGSRMPDLGGVEYGAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IPGLLMLTLLGETTSNSSFGIYMPRFTGTIYELLSAPVGVAETLVGFVGAAATKSLILTA
HHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IILLTAAIFVDYSIAHPLWAFVFVLLVACSFSLFGFILGIWADNFEKLGIIPLLFLTPLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLGGTFYSIDMLPEPWDTIALANPIVYLVSGLRWTFYGSSDVDFRISLGITVAFLAVCVG
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHHH
IIAFIFKTGWRLRD
HHHHHHHCCCCCCC
>Mature Secondary Structure
MISWRSTWAIYKRELMRFLRTAFQSVLAPVLTTSLYFIVFGAAIGSRMPDLGGVEYGAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
IPGLLMLTLLGETTSNSSFGIYMPRFTGTIYELLSAPVGVAETLVGFVGAAATKSLILTA
HHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IILLTAAIFVDYSIAHPLWAFVFVLLVACSFSLFGFILGIWADNFEKLGIIPLLFLTPLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
FLGGTFYSIDMLPEPWDTIALANPIVYLVSGLRWTFYGSSDVDFRISLGITVAFLAVCVG
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEEHHHHHHHHHHHHH
IIAFIFKTGWRLRD
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]