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The map label for this gene is yfgC [C]

Identifier: 85373826

GI number: 85373826

Start: 1027584

End: 1029017

Strand: Direct

Name: yfgC [C]

Synonym: ELI_04995

Alternate gene names: 85373826

Gene position: 1027584-1029017 (Clockwise)

Preceding gene: 85373825

Following gene: 85373829

Centisome position: 33.66

GC content: 61.85

Gene sequence:

>1434_bases
ATGAGCCTGGCATTGACAGGCTGCATGGGCGGAGGTGGCTCGATCCCGAGTGCTTCTGCCCCCATCACGCAGACAGAATC
GCAACAGGGCGCCGAAGCGCATCCCAAGCTGCTGGCCGAATTCGGCGGCCGGATGACAGGCGTGCACGCCGACTATGTCG
AGCGCGTCGGCAAGAACATCGCGGTTCAGTCGGGACTCGGAAATGCGCGCGAGGATTTCACCGTCAGCCTCGTCAACAGT
TCGGTCAACAATGCTTTCGCGATTCCCGGTGGCTATATTTACACCACACGCCAACTCGTCGGCCTGATGAATAATGAAGC
CGAACTGGCAGCCGTGCTGGGCCACGAAGTGGGCCATGTCGCCGCCCGTCATTCGCAACGCCGGCAGCAGGCCGCACAGC
GCAACTCCATCCTCGGTGTCCTAGGTGCCATCGCATCGGGCGTCTTGCTAGGCGATAGCGGTATCGGCGATACGCTCTCG
CGCGGTTTCCTGCAGGGGTCGCAGCTTCTGACGCTGCGCTTTTCCCGCAGTCAGGAACTGGAGGCGGACGAGCTTGGCAT
CCGTTATCTGACGAATGCCGGATACGATCCCCAGGCTATGAGCACCGTGCTGCGCAGTCTTGCGCTTCAGAACAGCCTCG
ATGCGCAATTGCAGGGTCGCAACGCGACTATCCCCGAATGGGCTTCGACCCACCCCGATCCCGCCAGTCGTGTTTCTACC
GCTTCCCAGAAGGCGCGGGGGCTATCCGGCACGGTGACCAATCGCGACACCTTTCTGTCCGGCATCGATGGGCTGCTATA
TGGTGATGATCCTGCACAGGGCGTGATCGAAGGCCAACGCTTCATTCACCCCGAACTCGGTTTCTCGTTCACTTCGCCCA
ACGGCTTCTACATGGTGAACGGGACCCGTGCGGTGTCGATCAACGGCGACGGCGGCCAAGCGCAGCTGACCATCGCGCGC
TATGATGGGAATCTCGAGACTTATGTCCGTTCGGTGTTCTCGGCGCTCGGCGGCAACCAGCAGCAGCTCACACCTTCGTC
GCTTCAGCGCACAACGGTGAACGGTTTGCCCGCCGTCTATGGGACAGCGCGAGTCAATACCGGCCAGCGAACGGTGGACG
TGGCTGTCTTCGCCTACGAGCTTGCACCTGACCGCGCCTATCATTTCCAAGCGATAACGCCGTCGGGCCGGATGAGCACC
TTTACCCCCATGTTCAACTCGATGAGGCGCATCACCAGTGCAGAGGCCAGTGCGGTCATCCCGCGGCGGATCGATGTCGT
CACCGTGGGCAGGGGGGACACGGTCGCAACGCTCGCCCGCCGGATGGCCTATGATCGCGCGCAAGTCGAACGCTTCAGGG
TCCTCAACGGTCTCGGAGCGAATGATACCTTGCAGGCCGGTCAGAAGGTGAAGATCGTGGTGCGCGCTCGCTGA

Upstream 100 bases:

>100_bases
TGGGAGCGGTTCGCTCGAGCGAAGCGCTTGATTCCGTACGAACCGAGGGACACGCATAATGAAAACCAAGCGTATTTTGG
CATCCGTTTCCGCAGCCGCA

Downstream 100 bases:

>100_bases
GCGTCAAATAATCCGACACAAACAAAAACGGCGGGGAACGCTCCCCGCCGTTTCCGTGTGGTTATTCGACCGAGTCTTAG
ACGGACATCGTGGTCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 476

Protein sequence:

>477_residues
MSLALTGCMGGGGSIPSASAPITQTESQQGAEAHPKLLAEFGGRMTGVHADYVERVGKNIAVQSGLGNAREDFTVSLVNS
SVNNAFAIPGGYIYTTRQLVGLMNNEAELAAVLGHEVGHVAARHSQRRQQAAQRNSILGVLGAIASGVLLGDSGIGDTLS
RGFLQGSQLLTLRFSRSQELEADELGIRYLTNAGYDPQAMSTVLRSLALQNSLDAQLQGRNATIPEWASTHPDPASRVST
ASQKARGLSGTVTNRDTFLSGIDGLLYGDDPAQGVIEGQRFIHPELGFSFTSPNGFYMVNGTRAVSINGDGGQAQLTIAR
YDGNLETYVRSVFSALGGNQQQLTPSSLQRTTVNGLPAVYGTARVNTGQRTVDVAVFAYELAPDRAYHFQAITPSGRMST
FTPMFNSMRRITSAEASAVIPRRIDVVTVGRGDTVATLARRMAYDRAQVERFRVLNGLGANDTLQAGQKVKIVVRAR

Sequences:

>Translated_477_residues
MSLALTGCMGGGGSIPSASAPITQTESQQGAEAHPKLLAEFGGRMTGVHADYVERVGKNIAVQSGLGNAREDFTVSLVNS
SVNNAFAIPGGYIYTTRQLVGLMNNEAELAAVLGHEVGHVAARHSQRRQQAAQRNSILGVLGAIASGVLLGDSGIGDTLS
RGFLQGSQLLTLRFSRSQELEADELGIRYLTNAGYDPQAMSTVLRSLALQNSLDAQLQGRNATIPEWASTHPDPASRVST
ASQKARGLSGTVTNRDTFLSGIDGLLYGDDPAQGVIEGQRFIHPELGFSFTSPNGFYMVNGTRAVSINGDGGQAQLTIAR
YDGNLETYVRSVFSALGGNQQQLTPSSLQRTTVNGLPAVYGTARVNTGQRTVDVAVFAYELAPDRAYHFQAITPSGRMST
FTPMFNSMRRITSAEASAVIPRRIDVVTVGRGDTVATLARRMAYDRAQVERFRVLNGLGANDTLQAGQKVKIVVRAR
>Mature_476_residues
SLALTGCMGGGGSIPSASAPITQTESQQGAEAHPKLLAEFGGRMTGVHADYVERVGKNIAVQSGLGNAREDFTVSLVNSS
VNNAFAIPGGYIYTTRQLVGLMNNEAELAAVLGHEVGHVAARHSQRRQQAAQRNSILGVLGAIASGVLLGDSGIGDTLSR
GFLQGSQLLTLRFSRSQELEADELGIRYLTNAGYDPQAMSTVLRSLALQNSLDAQLQGRNATIPEWASTHPDPASRVSTA
SQKARGLSGTVTNRDTFLSGIDGLLYGDDPAQGVIEGQRFIHPELGFSFTSPNGFYMVNGTRAVSINGDGGQAQLTIARY
DGNLETYVRSVFSALGGNQQQLTPSSLQRTTVNGLPAVYGTARVNTGQRTVDVAVFAYELAPDRAYHFQAITPSGRMSTF
TPMFNSMRRITSAEASAVIPRRIDVVTVGRGDTVATLARRMAYDRAQVERFRVLNGLGANDTLQAGQKVKIVVRAR

Specific function: Unknown

COG id: COG4784

COG function: function code R; Putative Zn-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=213, Percent_Identity=32.8638497652582, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082185, Length=156, Percent_Identity=32.0512820512821, Blast_Score=62, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322940, Length=222, Percent_Identity=25.6756756756757, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 50765; Mature: 50634

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALTGCMGGGGSIPSASAPITQTESQQGAEAHPKLLAEFGGRMTGVHADYVERVGKNI
CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHCCCE
AVQSGLGNAREDFTVSLVNSSVNNAFAIPGGYIYTTRQLVGLMNNEAELAAVLGHEVGHV
EEECCCCCCCCCEEEEEECCCCCCEEECCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH
AARHSQRRQQAAQRNSILGVLGAIASGVLLGDSGIGDTLSRGFLQGSQLLTLRFSRSQEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCC
EADELGIRYLTNAGYDPQAMSTVLRSLALQNSLDAQLQGRNATIPEWASTHPDPASRVST
CHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
ASQKARGLSGTVTNRDTFLSGIDGLLYGDDPAQGVIEGQRFIHPELGFSFTSPNGFYMVN
HHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHCCCCEECCCCCCEEECCCCEEEEC
GTRAVSINGDGGQAQLTIARYDGNLETYVRSVFSALGGNQQQLTPSSLQRTTVNGLPAVY
CEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEE
GTARVNTGQRTVDVAVFAYELAPDRAYHFQAITPSGRMSTFTPMFNSMRRITSAEASAVI
EEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEC
PRRIDVVTVGRGDTVATLARRMAYDRAQVERFRVLNGLGANDTLQAGQKVKIVVRAR
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEEC
>Mature Secondary Structure 
SLALTGCMGGGGSIPSASAPITQTESQQGAEAHPKLLAEFGGRMTGVHADYVERVGKNI
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEECCCHHHHHHHCCCE
AVQSGLGNAREDFTVSLVNSSVNNAFAIPGGYIYTTRQLVGLMNNEAELAAVLGHEVGHV
EEECCCCCCCCCEEEEEECCCCCCEEECCCCEEEEHHHHHHHHCCCHHHHHHHHHHHHHH
AARHSQRRQQAAQRNSILGVLGAIASGVLLGDSGIGDTLSRGFLQGSQLLTLRFSRSQEL
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHCCCCEEEEEEECCCCCC
EADELGIRYLTNAGYDPQAMSTVLRSLALQNSLDAQLQGRNATIPEWASTHPDPASRVST
CHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
ASQKARGLSGTVTNRDTFLSGIDGLLYGDDPAQGVIEGQRFIHPELGFSFTSPNGFYMVN
HHHHHCCCCCCCCCCHHHHHCCCCEEECCCCCCHHHCCCCEECCCCCCEEECCCCEEEEC
GTRAVSINGDGGQAQLTIARYDGNLETYVRSVFSALGGNQQQLTPSSLQRTTVNGLPAVY
CEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCEE
GTARVNTGQRTVDVAVFAYELAPDRAYHFQAITPSGRMSTFTPMFNSMRRITSAEASAVI
EEEEECCCCCEEEEEEEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEC
PRRIDVVTVGRGDTVATLARRMAYDRAQVERFRVLNGLGANDTLQAGQKVKIVVRAR
CCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]