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The map label for this gene is ybaT [C]

Identifier: 85373742

GI number: 85373742

Start: 948543

End: 949895

Strand: Reverse

Name: ybaT [C]

Synonym: ELI_04575

Alternate gene names: 85373742

Gene position: 949895-948543 (Counterclockwise)

Preceding gene: 85373743

Following gene: 85373741

Centisome position: 31.12

GC content: 60.31

Gene sequence:

>1353_bases
TTGCAAGACCATGAGCACGAGAATCAAAGCGAAACGGCTGGCTCGATAACCCTGCTGGGCGGCGTTGCGATGGGTACCGG
CGTCATGATCGGTGCCGGCATATTCGCGCTGACCGGGCAGATCGCCGAGCTCGCCGGTCCGCTCTTCCCCCTGTCTTTCA
TCGCCGGCGCGCTGGTAACTTCGCTGGCGGCCTACAGCTATATCAAGATGTCGAACAAATGGCCGTCTTCGGGCGGCATC
GCGATGATCTTGCAGAAGGCCTACGGACCCGGCGTCATTGCCGCGTCGGCATCGCTCCTGATGGCTCTGTCGATGGTCAT
CAATGAAAGCCTCGTGGCCCGCACCTTTGCGACTTACGCGCTGCGCCCGTTTGGCCTCGAAAGCAGCGGGTGGCTCGTTT
CGCTGGCAGCGCTTGCACTCATCATCTTCGCCTATCTCGTCAATGCAGCGGGCAACAAGTCGGTAAGCGGCTTCTCGCTC
ATCATGTCCGCCATCAAGATCGGCGGTATCGCGCTGTTCGCAGTCGCGGCGATCTGGGCCAGCGGATTTTCATCAGGCGC
ATTTTCGCAGTCCGTTTCGCTGACCAATGCAGAAGCCCTGCTCGCCTCGGTTGCTTTCTCGATCCTCGCCTTCAAAGGCT
TCACCACGATTACCAATAGCGGCGGCGAAATCGTTGACCCGCACAAGAATGTCGGCCGAACCATCATGATCTCGATAGCC
GTCTGCATCGTGATCTATCTGCTTGTCGCAGTGGCGGTGGGTTCGAGCCTGAGCATATCCGAGATCGTCGAGGCGCGCGA
TTATTCGCTCGCGGCTGCGGCGCGTCCGGCGCTGGGAGAACTGGGCTTCTATTTCACCGTGGCGATCGCGATCGCCGCCA
CCACTTCGGGCGTGATAGCGAGCGTATTTGCCGTGTCGCGCATGCTTGCGATGCTGACCGACATGAAGATGATCCCGCAC
AGCCATTTCGGCATGAGCGGCGGGATTCGCAGCCACATGCTGGTCTATACGGTGGTCATTGCCGGGACGCTTGCGGTCCT
GTTCGATCTGTCAAGGATCGCCTCGCTGGGCGCCTTCTTCTACCTCGTCATGGATATGCTGGTTCACTGGGGCGTCCTGC
GCCACCTGCGCAAGGAAGTCGGCGCGCGCGCAACAATACTTCTGACAGCGCTCGCGGCAGATGGCGTGGTCCTCGCAGCC
TTTACCGCGGCCAAATTGCGCAGCGATCCTGCCGTTGTCGCCTACGCGGCGATCGGCATCGTCGCAGTCTTCGTGGGAGA
ATGGATCTACCTCTCGCGCAATTCCGAAGCGCCCGCATCTCCTGAAGATGATGGGTCAGGAGAGAAAAGGTGA

Upstream 100 bases:

>100_bases
TCCGGCTTTGTCCTGAAAGTTTTTTGAGGGACGCGGCAAGGGCGAACGTACTGGTCGACATAATCTTTCTTTCACGGGAG
ACCATCGACAGGGGAAAGTC

Downstream 100 bases:

>100_bases
TGGCACCTTCTTCAACCAGCTTTGCCGCTTTTACGCCGGGCTTTTTCGAAACCGTTCACCGAAAACCGGCGTTGAGCACG
AGAAACGTCAGGCAAAACAG

Product: amino acid permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MQDHEHENQSETAGSITLLGGVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFIAGALVTSLAAYSYIKMSNKWPSSGGI
AMILQKAYGPGVIAASASLLMALSMVINESLVARTFATYALRPFGLESSGWLVSLAALALIIFAYLVNAAGNKSVSGFSL
IMSAIKIGGIALFAVAAIWASGFSSGAFSQSVSLTNAEALLASVAFSILAFKGFTTITNSGGEIVDPHKNVGRTIMISIA
VCIVIYLLVAVAVGSSLSISEIVEARDYSLAAAARPALGELGFYFTVAIAIAATTSGVIASVFAVSRMLAMLTDMKMIPH
SHFGMSGGIRSHMLVYTVVIAGTLAVLFDLSRIASLGAFFYLVMDMLVHWGVLRHLRKEVGARATILLTALAADGVVLAA
FTAAKLRSDPAVVAYAAIGIVAVFVGEWIYLSRNSEAPASPEDDGSGEKR

Sequences:

>Translated_450_residues
MQDHEHENQSETAGSITLLGGVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFIAGALVTSLAAYSYIKMSNKWPSSGGI
AMILQKAYGPGVIAASASLLMALSMVINESLVARTFATYALRPFGLESSGWLVSLAALALIIFAYLVNAAGNKSVSGFSL
IMSAIKIGGIALFAVAAIWASGFSSGAFSQSVSLTNAEALLASVAFSILAFKGFTTITNSGGEIVDPHKNVGRTIMISIA
VCIVIYLLVAVAVGSSLSISEIVEARDYSLAAAARPALGELGFYFTVAIAIAATTSGVIASVFAVSRMLAMLTDMKMIPH
SHFGMSGGIRSHMLVYTVVIAGTLAVLFDLSRIASLGAFFYLVMDMLVHWGVLRHLRKEVGARATILLTALAADGVVLAA
FTAAKLRSDPAVVAYAAIGIVAVFVGEWIYLSRNSEAPASPEDDGSGEKR
>Mature_450_residues
MQDHEHENQSETAGSITLLGGVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFIAGALVTSLAAYSYIKMSNKWPSSGGI
AMILQKAYGPGVIAASASLLMALSMVINESLVARTFATYALRPFGLESSGWLVSLAALALIIFAYLVNAAGNKSVSGFSL
IMSAIKIGGIALFAVAAIWASGFSSGAFSQSVSLTNAEALLASVAFSILAFKGFTTITNSGGEIVDPHKNVGRTIMISIA
VCIVIYLLVAVAVGSSLSISEIVEARDYSLAAAARPALGELGFYFTVAIAIAATTSGVIASVFAVSRMLAMLTDMKMIPH
SHFGMSGGIRSHMLVYTVVIAGTLAVLFDLSRIASLGAFFYLVMDMLVHWGVLRHLRKEVGARATILLTALAADGVVLAA
FTAAKLRSDPAVVAYAAIGIVAVFVGEWIYLSRNSEAPASPEDDGSGEKR

Specific function: Probable Amino-Acid Or Metabolite Transport Protein. [C]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786694, Length=322, Percent_Identity=30.1242236024845, Blast_Score=119, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17540018, Length=311, Percent_Identity=26.0450160771704, Blast_Score=79, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17568033, Length=315, Percent_Identity=25.7142857142857, Blast_Score=66, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221331183, Length=331, Percent_Identity=24.773413897281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI17647653, Length=331, Percent_Identity=24.773413897281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24664379, Length=331, Percent_Identity=24.773413897281, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24667468, Length=364, Percent_Identity=27.4725274725275, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24651635, Length=303, Percent_Identity=24.7524752475248, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24651633, Length=303, Percent_Identity=24.7524752475248, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 46637; Mature: 46637

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDHEHENQSETAGSITLLGGVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFIAGALVT
CCCCCCCCCHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLAAYSYIKMSNKWPSSGGIAMILQKAYGPGVIAASASLLMALSMVINESLVARTFATYA
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPFGLESSGWLVSLAALALIIFAYLVNAAGNKSVSGFSLIMSAIKIGGIALFAVAAIWA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGFSSGAFSQSVSLTNAEALLASVAFSILAFKGFTTITNSGGEIVDPHKNVGRTIMISIA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCHHCCHHHHHHHH
VCIVIYLLVAVAVGSSLSISEIVEARDYSLAAAARPALGELGFYFTVAIAIAATTSGVIA
HHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVFAVSRMLAMLTDMKMIPHSHFGMSGGIRSHMLVYTVVIAGTLAVLFDLSRIASLGAFF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLVMDMLVHWGVLRHLRKEVGARATILLTALAADGVVLAAFTAAKLRSDPAVVAYAAIGI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
VAVFVGEWIYLSRNSEAPASPEDDGSGEKR
HHHHHHCEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQDHEHENQSETAGSITLLGGVAMGTGVMIGAGIFALTGQIAELAGPLFPLSFIAGALVT
CCCCCCCCCHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLAAYSYIKMSNKWPSSGGIAMILQKAYGPGVIAASASLLMALSMVINESLVARTFATYA
HHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRPFGLESSGWLVSLAALALIIFAYLVNAAGNKSVSGFSLIMSAIKIGGIALFAVAAIWA
HCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SGFSSGAFSQSVSLTNAEALLASVAFSILAFKGFTTITNSGGEIVDPHKNVGRTIMISIA
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCHHCCHHHHHHHH
VCIVIYLLVAVAVGSSLSISEIVEARDYSLAAAARPALGELGFYFTVAIAIAATTSGVIA
HHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
SVFAVSRMLAMLTDMKMIPHSHFGMSGGIRSHMLVYTVVIAGTLAVLFDLSRIASLGAFF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLVMDMLVHWGVLRHLRKEVGARATILLTALAADGVVLAAFTAAKLRSDPAVVAYAAIGI
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHH
VAVFVGEWIYLSRNSEAPASPEDDGSGEKR
HHHHHHCEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]