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The map label for this gene is yubM [H]

Identifier: 85373633

GI number: 85373633

Start: 833190

End: 835163

Strand: Direct

Name: yubM [H]

Synonym: ELI_04030

Alternate gene names: 85373633

Gene position: 833190-835163 (Clockwise)

Preceding gene: 85373632

Following gene: 85373634

Centisome position: 27.3

GC content: 64.79

Gene sequence:

>1974_bases
ATGATCCATTCGATTCCCTTGAAGAAGCTCGTCCCGAGCCCGCGCAACGTTCGCAAGTCGAGCGACGTGCTGGCCGACCT
CCAGCTGCGGGCAGACATTGCTGCGCGCGGCCTGCTGCAGAACCTCGTCGTGCGCAAAGGAAAGCGCGGCAAATTCGAAG
TCGAGGCCGGCGGTCGCCGTCTCGCCGCGCTGCAGGCGCTGGCCGAAGAGGGCACCTTGCCTGACACGCACGAAGTCACC
TGCCTCGTGATCGAAGGCGAGGAAAGCGAAGTGCGCGAAGCCAGCCTCGCCGAGAACTTCCAGCGACTCGCGATGAACCC
GGCCGACGAGGCGCAGGCCTTCGCCTCCATCATCGAAGCAGGAGCTACGACGGAAGACGTAGCGCGACGCTTCGGCCTCA
CCGTCCGGTTCGTCGAAGGGCGCCTGCGTTTGGCAAGTCTGGCACCCTGCGTCTTCGAAGCGCTCGCCGAAGGCACGATC
ACGCTCGACATGGCCAAGGCCTACGGCGCGATCTCCGACGTCGAGCGCCAGGCGCATGTCTATGCCGAGCTGCAGGATGC
CTGGTACCAGATCACGCCTGACACGATCCGCCGCATGGTGCTTGATGCCACGGTGCGTGGTTCCGATCCGCGGGCCGTGC
TTGTCGGACGCGATGCCTATCTCGCCGCAGGCGGCCGGATTGAGCGCGAACTGTTCGACGATGACGCCAGCGAGAGCTGG
ATCGATGTCGCGCTGCTCGAAGACCTCGCGCACAAGGCCATGGACGAAGCCGCAGAAAAGACCGCGCTCGAATTTGGCCT
TGCCTGGGTCCGGCCGACGCTTGGCAACTACGTCAGCCACGACCTTGTTGAAGGTCTCGGTCGCTTGCCCTGCGAGCCTG
CGCCAATGACCGAGCAGGAAGCGCAGGAGCTCGGTGAGCTCGAGGCCGACTACGACCGCGTCGCCGCCGTGCTCGAAGAC
GAAGACAGCGACGAGGACGAGGTCGCCAAGGCCGAACAGGAACTCGTCGTCATCGACCGCGCCATGCGCGCGCTCAATGA
CCGGCCGCCGGTCCTCGCTGACGAACTGAAATCCGAGGCTGGTGCCTTCCTAGTCCTCTCGCGCAATGGCGAGCCGACCT
TGGTCCCGCAGTTCTACACCGAGACCGAAGTCATCGCTGACGAAGGCGTGATCGAGGCCATTGAAGAGAGCGGTGCGGCG
AAGCCCAAGGGCAGCTCGCTGTCCCAGCGCCTGCTCGACGAACTGGCCATGCAGCGCCGCGACATCCTTGCGATCCATCT
CGCCAACGATCCGGCACTGGCGCTCGACTTCATGGTCTTCACGCTTGCCGATGTCGATGGACATGACTGGCGCGCCAAGA
AAGCGTCGACGCTGGTCGGCTCTGTCGCTTCCGGCCCGGTCACCGGGTTTGAGGCCAAGGATGCGCCGGCGAGCGCTGCC
CTGGCCGAGTTTGCCGGGTCGCTCGATGAAAGCTGGCGTGCTGGTGAATGCGACGTGAAGCGGTTTGCGAGGTTCCGGGC
GCTTTCCGATGAGGCGCGTTCGGCCTGGCTCGGCCATGTCGTCTCGCGCACTCTAGTTGCAAGCCTTGCGTGCGAAGGCG
AACGTTCGGTGCCGCTGCACGAGGCGCTTGGCTCGTTACTTGAAATCGAGACCGCGCATTGGTGGCGTCCCACGGCGGCC
AACTACTTCGACCGCGTGGCCAAGGCTCGCACGCTCGAAGCGCTCGATGGCGCCGGCGGTCCCGAACTCGTCAGTCGCTA
TGCCGCATCGAAGAAGGCCGAACTGGCGAGCGCTGCCGAGCGCATCTTCTCCGGCAACTTCATTGGCGAGCCCGAGGTCA
AGGAACGGGCGCAGGCCTGGGTTCCACCTATAATGCGTTTCGCCGGTTCTGAAGAAGCCGAACTGGCGGACCACGGAGGC
GACGAGGCGGCCAACGTGGAAGCAACTGACGAAATTGCCGAGCAGGCTGCCTGA

Upstream 100 bases:

>100_bases
TAGGGCAGACCCCAATCTCAGAATGAGAGTGGAGGGAGCCCTTTGGGCTTGTGGGCCTCGTGATCCTCACCTGCGCCTTC
ATTCCATCAGGAGAACACCC

Downstream 100 bases:

>100_bases
CCCCTCCTGACAGGTCCAGGTCACTCGGCGGGCGGTCCGTCCCAATCGGGACGGGCCGCCTTTTCCATGTCAAATTTGGG
GCCGATTGCTGACTGTCTGC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 657

Protein sequence:

>657_residues
MIHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPDTHEVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMDEAAEKTALEFGLAWVRPTLGNYVSHDLVEGLGRLPCEPAPMTEQEAQELGELEADYDRVAAVLED
EDSDEDEVAKAEQELVVIDRAMRALNDRPPVLADELKSEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVIEAIEESGAA
KPKGSSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADVDGHDWRAKKASTLVGSVASGPVTGFEAKDAPASAA
LAEFAGSLDESWRAGECDVKRFARFRALSDEARSAWLGHVVSRTLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDGAGGPELVSRYAASKKAELASAAERIFSGNFIGEPEVKERAQAWVPPIMRFAGSEEAELADHGG
DEAANVEATDEIAEQAA

Sequences:

>Translated_657_residues
MIHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPDTHEVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMDEAAEKTALEFGLAWVRPTLGNYVSHDLVEGLGRLPCEPAPMTEQEAQELGELEADYDRVAAVLED
EDSDEDEVAKAEQELVVIDRAMRALNDRPPVLADELKSEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVIEAIEESGAA
KPKGSSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADVDGHDWRAKKASTLVGSVASGPVTGFEAKDAPASAA
LAEFAGSLDESWRAGECDVKRFARFRALSDEARSAWLGHVVSRTLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDGAGGPELVSRYAASKKAELASAAERIFSGNFIGEPEVKERAQAWVPPIMRFAGSEEAELADHGG
DEAANVEATDEIAEQAA
>Mature_657_residues
MIHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRRLAALQALAEEGTLPDTHEVT
CLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEAGATTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTI
TLDMAKAYGAISDVERQAHVYAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
IDVALLEDLAHKAMDEAAEKTALEFGLAWVRPTLGNYVSHDLVEGLGRLPCEPAPMTEQEAQELGELEADYDRVAAVLED
EDSDEDEVAKAEQELVVIDRAMRALNDRPPVLADELKSEAGAFLVLSRNGEPTLVPQFYTETEVIADEGVIEAIEESGAA
KPKGSSLSQRLLDELAMQRRDILAIHLANDPALALDFMVFTLADVDGHDWRAKKASTLVGSVASGPVTGFEAKDAPASAA
LAEFAGSLDESWRAGECDVKRFARFRALSDEARSAWLGHVVSRTLVASLACEGERSVPLHEALGSLLEIETAHWWRPTAA
NYFDRVAKARTLEALDGAGGPELVSRYAASKKAELASAAERIFSGNFIGEPEVKERAQAWVPPIMRFAGSEEAELADHGG
DEAANVEATDEIAEQAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 71200; Mature: 71200

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRR
CCCCCCHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
LAALQALAEEGTLPDTHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEA
HHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV
CCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH
YAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
HHHHHHHHEEECHHHHHHHHHHHHCCCCCCCEEEEECCHHEECCCCHHHHHHCCCCCCHH
IDVALLEDLAHKAMDEAAEKTALEFGLAWVRPTLGNYVSHDLVEGLGRLPCEPAPMTEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AQELGELEADYDRVAAVLEDEDSDEDEVAKAEQELVVIDRAMRALNDRPPVLADELKSEA
HHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
GAFLVLSRNGEPTLVPQFYTETEVIADEGVIEAIEESGAAKPKGSSLSQRLLDELAMQRR
CEEEEEECCCCCCCCCCHHCCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
DILAIHLANDPALALDFMVFTLADVDGHDWRAKKASTLVGSVASGPVTGFEAKDAPASAA
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAEFAGSLDESWRAGECDVKRFARFRALSDEARSAWLGHVVSRTLVASLACEGERSVPLH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EALGSLLEIETAHWWRPTAANYFDRVAKARTLEALDGAGGPELVSRYAASKKAELASAAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RIFSGNFIGEPEVKERAQAWVPPIMRFAGSEEAELADHGGDEAANVEATDEIAEQAA
HHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIHSIPLKKLVPSPRNVRKSSDVLADLQLRADIAARGLLQNLVVRKGKRGKFEVEAGGRR
CCCCCCHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
LAALQALAEEGTLPDTHEVTCLVIEGEESEVREASLAENFQRLAMNPADEAQAFASIIEA
HHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GATTEDVARRFGLTVRFVEGRLRLASLAPCVFEALAEGTITLDMAKAYGAISDVERQAHV
CCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCHHHHHHHHHH
YAELQDAWYQITPDTIRRMVLDATVRGSDPRAVLVGRDAYLAAGGRIERELFDDDASESW
HHHHHHHHEEECHHHHHHHHHHHHCCCCCCCEEEEECCHHEECCCCHHHHHHCCCCCCHH
IDVALLEDLAHKAMDEAAEKTALEFGLAWVRPTLGNYVSHDLVEGLGRLPCEPAPMTEQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
AQELGELEADYDRVAAVLEDEDSDEDEVAKAEQELVVIDRAMRALNDRPPVLADELKSEA
HHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCC
GAFLVLSRNGEPTLVPQFYTETEVIADEGVIEAIEESGAAKPKGSSLSQRLLDELAMQRR
CEEEEEECCCCCCCCCCHHCCHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
DILAIHLANDPALALDFMVFTLADVDGHDWRAKKASTLVGSVASGPVTGFEAKDAPASAA
CEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAEFAGSLDESWRAGECDVKRFARFRALSDEARSAWLGHVVSRTLVASLACEGERSVPLH
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EALGSLLEIETAHWWRPTAANYFDRVAKARTLEALDGAGGPELVSRYAASKKAELASAAE
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RIFSGNFIGEPEVKERAQAWVPPIMRFAGSEEAELADHGGDEAANVEATDEIAEQAA
HHHCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]