Click here to switch to the map view.

The map label for this gene is yidK [H]

Identifier: 85373573

GI number: 85373573

Start: 772305

End: 774011

Strand: Reverse

Name: yidK [H]

Synonym: ELI_03730

Alternate gene names: 85373573

Gene position: 774011-772305 (Counterclockwise)

Preceding gene: 85373579

Following gene: 85373569

Centisome position: 25.36

GC content: 61.92

Gene sequence:

>1707_bases
ATGGGCGCGGGATCGATCCTCTTTACGCTGGTCACCTGCGCCCTTTTCATGGGACTGGTGGCGTGGATCAGCTGGCTCAA
GACCCGCGGCAGTGTCGACAGCAGGGAAGGCTATTTCCTCGCCGGCAGGGGCCTTGGAGCGACATTCATTGCTGGTTCGC
TGCTGCTCACGAACCTCAGCGCGGAACAGCTGATCGGGCTCAATGGCTCGGCCTACGGATACGACCTGTCCAGCATGGCG
TGGGAAGTGACCGCCGCAGTCGCCACGATCGCTATGGCTTTCCTGTTTTTGCCCAGATACCTGGCCGGGGCCTTCACCAC
CCTCCCGGAATTCCTCAACGATCGCTTCGACCCGACAGTCAGGCGTATGTCGGTGGTGCTGTTTATGCTCGGCTACGGCC
TCGTTACGATTCCGAGTGTGCTTTATTCCGGCTCGATCGCGGTGATGCAGCTGTTTGCCGTCCCGACGCTGACCGGGCTC
GCCTATTTTCCGGCGCTGGTCGTGACGGTGATCGTCATCGGCGTGACCGGCGCGATCTACGCAGTGTTCGGCGGCCTGAA
AGCGGTTGCGGTGTCGGACACCCTCAACGGGATTGGCCTGCTCGCCATCGGCATCCTTGTTCCGGTGCTTGGCCTTATGG
CCCTGGGCGATGGCTCCTTCGGCGACGGCTTCGACCGCCTCGTCAGCGACCATCCGGAAAAGCTCGACGCGATCGGCGGT
GCCGACAGCCCCACCCCTTTCGGCACGATCTTCACCGGCATGATCTTCGCCAATCTGTTCTACTGGTGCACCAACCAGTA
CGTGATCCAGCGCACACTCGGCGCGCAGTCTCTCGCGGAAGGGCAGAAAGGCGTGCTGTTCTCGGGCTTTTTCAAAGTGC
TGGTCCCGTTTCTGATGATGATCCCCGGGGTCATCGCCTTTCACCTCTACGGTCCGGGCCTCGCAACCATCGACCAGGCC
TATCCGCGGCTGATCCAGGATGTGCTGCCGCTGTGGCTATCGGGCTTCTTCCTAGCCGTGCTGCTTGGCGCGGTATTCAG
CAGCTTCAATTCACTGCTCAACAGCGCCGCAACCTTGTTCAGCCTCGACGTGTATGCCCCAGCCTGCAAGACCACGCCGA
GCGATGGAGAACTGATCCGCGTCGCCAAGATCGCGAGCGTGGTCATCGCGCTGTTCTCTTTCGCGGTTGCGCCCCTGCTC
TATTTCGCGGCCGAGGGACTGTGGCAGGTCATTCGTGTCTTCACAGGCTTTTACAATATCCCCACCGTAGCCATTGTGAT
CATTGGCCTTTTTACGCGGCGCGTGCCTGCGCTCGGGGCCAAGGTCGCAATTGTCTTTCACGTCGTCGTCTATGGCCTGC
TGCGCTTCGTCTTGGACGATGTCGTCACGCTCCATTTCCTGCATCAGTACGCGCTGCTGTTCATTGCCGAGATCGCGATC
ATGCTGGGGATCGGCTGGTGGCGGCCGCGCGAACAGAGCTGGAGCTTCACGCCCCGCGCCGAGGTCGATATGACCCCGTG
GCGATTTGCCAAGCCGCTTGCGATCACGCTCTTTTCCTGCGTGGTCGCGCTCTACATTCTGTTCTCTCCGATCGGTTTCG
CCAGCGCCACCGGACCAGGCGCGCTTCTGCCCGGACTGCTCGGCGCCCTAGCGCTCGGCAATCTGGCGATGTGGCTCTGG
GCGTCCAGCCGCGCGCGGGCTAGCTGA

Upstream 100 bases:

>100_bases
CGTGCCGATTTTGTCAGCATTGCAGCATTGCGTTGCAAAAACGCATCAAATTCGGCGGCATCCTTGCACGATTGCGACAC
TTCGCGCAGTAACATTGCGT

Downstream 100 bases:

>100_bases
TCAGGCTCGCCAAAACCCGGCGCTTGCCTCTGAATGGTCGGCGGCCGTGCATGACGAGGAAATTGTCGACGAGCGCCACG
TCGCCCTGTTGCCACGCGAG

Product: putative symporter YidK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 568; Mature: 567

Protein sequence:

>568_residues
MGAGSILFTLVTCALFMGLVAWISWLKTRGSVDSREGYFLAGRGLGATFIAGSLLLTNLSAEQLIGLNGSAYGYDLSSMA
WEVTAAVATIAMAFLFLPRYLAGAFTTLPEFLNDRFDPTVRRMSVVLFMLGYGLVTIPSVLYSGSIAVMQLFAVPTLTGL
AYFPALVVTVIVIGVTGAIYAVFGGLKAVAVSDTLNGIGLLAIGILVPVLGLMALGDGSFGDGFDRLVSDHPEKLDAIGG
ADSPTPFGTIFTGMIFANLFYWCTNQYVIQRTLGAQSLAEGQKGVLFSGFFKVLVPFLMMIPGVIAFHLYGPGLATIDQA
YPRLIQDVLPLWLSGFFLAVLLGAVFSSFNSLLNSAATLFSLDVYAPACKTTPSDGELIRVAKIASVVIALFSFAVAPLL
YFAAEGLWQVIRVFTGFYNIPTVAIVIIGLFTRRVPALGAKVAIVFHVVVYGLLRFVLDDVVTLHFLHQYALLFIAEIAI
MLGIGWWRPREQSWSFTPRAEVDMTPWRFAKPLAITLFSCVVALYILFSPIGFASATGPGALLPGLLGALALGNLAMWLW
ASSRARAS

Sequences:

>Translated_568_residues
MGAGSILFTLVTCALFMGLVAWISWLKTRGSVDSREGYFLAGRGLGATFIAGSLLLTNLSAEQLIGLNGSAYGYDLSSMA
WEVTAAVATIAMAFLFLPRYLAGAFTTLPEFLNDRFDPTVRRMSVVLFMLGYGLVTIPSVLYSGSIAVMQLFAVPTLTGL
AYFPALVVTVIVIGVTGAIYAVFGGLKAVAVSDTLNGIGLLAIGILVPVLGLMALGDGSFGDGFDRLVSDHPEKLDAIGG
ADSPTPFGTIFTGMIFANLFYWCTNQYVIQRTLGAQSLAEGQKGVLFSGFFKVLVPFLMMIPGVIAFHLYGPGLATIDQA
YPRLIQDVLPLWLSGFFLAVLLGAVFSSFNSLLNSAATLFSLDVYAPACKTTPSDGELIRVAKIASVVIALFSFAVAPLL
YFAAEGLWQVIRVFTGFYNIPTVAIVIIGLFTRRVPALGAKVAIVFHVVVYGLLRFVLDDVVTLHFLHQYALLFIAEIAI
MLGIGWWRPREQSWSFTPRAEVDMTPWRFAKPLAITLFSCVVALYILFSPIGFASATGPGALLPGLLGALALGNLAMWLW
ASSRARAS
>Mature_567_residues
GAGSILFTLVTCALFMGLVAWISWLKTRGSVDSREGYFLAGRGLGATFIAGSLLLTNLSAEQLIGLNGSAYGYDLSSMAW
EVTAAVATIAMAFLFLPRYLAGAFTTLPEFLNDRFDPTVRRMSVVLFMLGYGLVTIPSVLYSGSIAVMQLFAVPTLTGLA
YFPALVVTVIVIGVTGAIYAVFGGLKAVAVSDTLNGIGLLAIGILVPVLGLMALGDGSFGDGFDRLVSDHPEKLDAIGGA
DSPTPFGTIFTGMIFANLFYWCTNQYVIQRTLGAQSLAEGQKGVLFSGFFKVLVPFLMMIPGVIAFHLYGPGLATIDQAY
PRLIQDVLPLWLSGFFLAVLLGAVFSSFNSLLNSAATLFSLDVYAPACKTTPSDGELIRVAKIASVVIALFSFAVAPLLY
FAAEGLWQVIRVFTGFYNIPTVAIVIIGLFTRRVPALGAKVAIVFHVVVYGLLRFVLDDVVTLHFLHQYALLFIAEIAIM
LGIGWWRPREQSWSFTPRAEVDMTPWRFAKPLAITLFSCVVALYILFSPIGFASATGPGALLPGLLGALALGNLAMWLWA
SSRARAS

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI110835708, Length=480, Percent_Identity=28.125, Blast_Score=166, Evalue=8e-41,
Organism=Homo sapiens, GI17941285, Length=449, Percent_Identity=28.9532293986637, Blast_Score=163, Evalue=4e-40,
Organism=Homo sapiens, GI4507031, Length=478, Percent_Identity=27.8242677824268, Blast_Score=152, Evalue=8e-37,
Organism=Homo sapiens, GI14140236, Length=519, Percent_Identity=25.8188824662813, Blast_Score=152, Evalue=1e-36,
Organism=Homo sapiens, GI206597483, Length=468, Percent_Identity=26.9230769230769, Blast_Score=149, Evalue=5e-36,
Organism=Homo sapiens, GI4507033, Length=465, Percent_Identity=28.3870967741935, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI109659836, Length=470, Percent_Identity=27.8723404255319, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI206597487, Length=493, Percent_Identity=25.3549695740365, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI109659839, Length=486, Percent_Identity=27.1604938271605, Blast_Score=139, Evalue=6e-33,
Organism=Homo sapiens, GI4507035, Length=419, Percent_Identity=23.6276849642005, Blast_Score=74, Evalue=5e-13,
Organism=Homo sapiens, GI167466278, Length=431, Percent_Identity=22.737819025522, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI157671931, Length=364, Percent_Identity=22.8021978021978, Blast_Score=66, Evalue=9e-11,
Organism=Escherichia coli, GI1790113, Length=511, Percent_Identity=44.8140900195695, Blast_Score=429, Evalue=1e-121,
Organism=Escherichia coli, GI87082237, Length=448, Percent_Identity=24.5535714285714, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI115533094, Length=441, Percent_Identity=24.7165532879819, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24651741, Length=360, Percent_Identity=24.4444444444444, Blast_Score=86, Evalue=9e-17,
Organism=Drosophila melanogaster, GI24651739, Length=433, Percent_Identity=23.094688221709, Blast_Score=79, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24645928, Length=357, Percent_Identity=26.890756302521, Blast_Score=75, Evalue=9e-14,
Organism=Drosophila melanogaster, GI161076631, Length=381, Percent_Identity=25.1968503937008, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28573698, Length=467, Percent_Identity=22.2698072805139, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574994, Length=434, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=7e-12,
Organism=Drosophila melanogaster, GI19920916, Length=422, Percent_Identity=24.8815165876777, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281364280, Length=384, Percent_Identity=23.1770833333333, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221459586, Length=433, Percent_Identity=24.7113163972286, Blast_Score=66, Evalue=7e-11,
Organism=Drosophila melanogaster, GI221459584, Length=390, Percent_Identity=23.3333333333333, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 60862; Mature: 60730

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAGSILFTLVTCALFMGLVAWISWLKTRGSVDSREGYFLAGRGLGATFIAGSLLLTNLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC
AEQLIGLNGSAYGYDLSSMAWEVTAAVATIAMAFLFLPRYLAGAFTTLPEFLNDRFDPTV
HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RRMSVVLFMLGYGLVTIPSVLYSGSIAVMQLFAVPTLTGLAYFPALVVTVIVIGVTGAIY
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFGGLKAVAVSDTLNGIGLLAIGILVPVLGLMALGDGSFGDGFDRLVSDHPEKLDAIGG
HHHHCHHHEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHCCC
ADSPTPFGTIFTGMIFANLFYWCTNQYVIQRTLGAQSLAEGQKGVLFSGFFKVLVPFLMM
CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHH
IPGVIAFHLYGPGLATIDQAYPRLIQDVLPLWLSGFFLAVLLGAVFSSFNSLLNSAATLF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLDVYAPACKTTPSDGELIRVAKIASVVIALFSFAVAPLLYFAAEGLWQVIRVFTGFYNI
HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTVAIVIIGLFTRRVPALGAKVAIVFHVVVYGLLRFVLDDVVTLHFLHQYALLFIAEIAI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLGIGWWRPREQSWSFTPRAEVDMTPWRFAKPLAITLFSCVVALYILFSPIGFASATGPG
HHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
ALLPGLLGALALGNLAMWLWASSRARAS
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GAGSILFTLVTCALFMGLVAWISWLKTRGSVDSREGYFLAGRGLGATFIAGSLLLTNLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCC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HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]