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The map label for this gene is crtW [H]

Identifier: 85373491

GI number: 85373491

Start: 699427

End: 700194

Strand: Direct

Name: crtW [H]

Synonym: ELI_03320

Alternate gene names: 85373491

Gene position: 699427-700194 (Clockwise)

Preceding gene: 85373490

Following gene: 85373492

Centisome position: 22.91

GC content: 61.07

Gene sequence:

>768_bases
ATGTCTGACGGTCCTGCCTTTTCGTTGCCTGCGCGCTCGCGTCAGCAGGCGATCGGGTTGACGCTCGCCGTGCTGATCGC
TGGCGCGTGGCTCGGCATCCACGCCTATGCGATGTTCGTTTTCGAGCTGAGTTGGCAGAACCTGCCCTTCGCACTTCTGC
TAGCAACGGTGCAAACGTGGCTGTCGGTTGGCGTCTTCATCGTTAGTCATGACGCAATGCACGGCTCGCTGGCACCCGGC
AGGCCGACGCTGAATTCGGCGATCGGCGCGTTTCTCTTGGCCCTTTACGCAGGCTTCGGCTGGCGACGAATGCGTGACGC
GCATTTTACCCACCACAAGCTGGCGGGCCATGCGGGAGACCCGGATTTCGACGAGCACAATCCGCGCAGTTTCTGGCGCT
GGTACGGAACCTTCTTCCGGCGCTATTTCAGCTGGCAATCGATCCTGTTCGTGCATGTCGTTGTCGGCATCTACTGGCTA
GTCCTCGACATTCCGATGGTGCAGATCGTCCTGCTCTACGGCGCACCGGCACTGCTTTCATCGCTGCAGCTTTTCTACTT
CGGGACCTTTCGTCCACATCGGCGTTCCGAAGAGGGTTTTGCCGACCGGCACAACGCGCGCAGCGATGGCTTCGGCACGT
TGGCCAGCCTCGCCACGTGCTTCCATTTCGGCTATCATCTCGAACATCATCGGCGTCCCGACGTGCCGTGGTGGGCCTTG
CCCGGCGCGCGAGAAGCGGGGATCGGAATGGAAGCGCAAAACGCATGA

Upstream 100 bases:

>100_bases
TCTTTTTTCCGGAAGCCGACTGACCCCACGGACTTCCGTCCAATTGTGCTGTGCGGCGCGTGTTGCTAGATGCACTCGCA
TGGGTCGCGTAATCTCCTGA

Downstream 100 bases:

>100_bases
GCTGGTGGGCAATCGCCCTGATCGTATTCGGTGCCGTGGTCGGCATGGAGTTTTTTGCCTGGTTTGCCCACAAATACATC
ATGCACGGCTGGGGCTGGTC

Product: beta-carotene ketolase

Products: NA

Alternate protein names: Beta-carotene oxygenase [H]

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSDGPAFSLPARSRQQAIGLTLAVLIAGAWLGIHAYAMFVFELSWQNLPFALLLATVQTWLSVGVFIVSHDAMHGSLAPG
RPTLNSAIGAFLLALYAGFGWRRMRDAHFTHHKLAGHAGDPDFDEHNPRSFWRWYGTFFRRYFSWQSILFVHVVVGIYWL
VLDIPMVQIVLLYGAPALLSSLQLFYFGTFRPHRRSEEGFADRHNARSDGFGTLASLATCFHFGYHLEHHRRPDVPWWAL
PGAREAGIGMEAQNA

Sequences:

>Translated_255_residues
MSDGPAFSLPARSRQQAIGLTLAVLIAGAWLGIHAYAMFVFELSWQNLPFALLLATVQTWLSVGVFIVSHDAMHGSLAPG
RPTLNSAIGAFLLALYAGFGWRRMRDAHFTHHKLAGHAGDPDFDEHNPRSFWRWYGTFFRRYFSWQSILFVHVVVGIYWL
VLDIPMVQIVLLYGAPALLSSLQLFYFGTFRPHRRSEEGFADRHNARSDGFGTLASLATCFHFGYHLEHHRRPDVPWWAL
PGAREAGIGMEAQNA
>Mature_254_residues
SDGPAFSLPARSRQQAIGLTLAVLIAGAWLGIHAYAMFVFELSWQNLPFALLLATVQTWLSVGVFIVSHDAMHGSLAPGR
PTLNSAIGAFLLALYAGFGWRRMRDAHFTHHKLAGHAGDPDFDEHNPRSFWRWYGTFFRRYFSWQSILFVHVVVGIYWLV
LDIPMVQIVLLYGAPALLSSLQLFYFGTFRPHRRSEEGFADRHNARSDGFGTLASLATCFHFGYHLEHHRRPDVPWWALP
GAREAGIGMEAQNA

Specific function: Converts beta-carotene to canthaxanthin via echinenone [H]

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: NA

Molecular weight: Translated: 28738; Mature: 28607

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDGPAFSLPARSRQQAIGLTLAVLIAGAWLGIHAYAMFVFELSWQNLPFALLLATVQTW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LSVGVFIVSHDAMHGSLAPGRPTLNSAIGAFLLALYAGFGWRRMRDAHFTHHKLAGHAGD
HHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
PDFDEHNPRSFWRWYGTFFRRYFSWQSILFVHVVVGIYWLVLDIPMVQIVLLYGAPALLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLQLFYFGTFRPHRRSEEGFADRHNARSDGFGTLASLATCFHFGYHLEHHRRPDVPWWAL
HHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
PGAREAGIGMEAQNA
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592436 [H]