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The map label for this gene is yqgF [C]

Identifier: 85373365

GI number: 85373365

Start: 575722

End: 576225

Strand: Reverse

Name: yqgF [C]

Synonym: ELI_02690

Alternate gene names: 85373365

Gene position: 576225-575722 (Counterclockwise)

Preceding gene: 85373366

Following gene: 85373364

Centisome position: 18.88

GC content: 66.47

Gene sequence:

>504_bases
ATGGCAGAGCCCGGCCGCCTGATCACCGAAAGCGCTCTGGAGTATGGCGACGCGCTGCCGGATGGTGGTGTGTTGCTGGC
GCTCGACCTCGGCACCAAGACCATCGGCACGGCCACCAGTGATGCGGGATGGCGCTTCGCCACCGCCGGCAAGACTCTGC
CGCGCGGACGGTTCGGCAAGGACAAGGCCAAGCTGCAGGAGATCGTGAGTAGCCGCAATGTAGCGGGCCTCGTCCTCGGC
CTGCCGCGCAATATGGACGGCAGCGAAGGTCCGCGCGCGCAAGCCAGCCGCGCCTACGCCCGCAATCTCGCGGAAGCCTT
CGGCCTGCCGGTGCTGTTGTGGGACGAGCGATGGTCCACACAGAGCGCGGAAAGCGCGATGATCGGGCAGGACATGAGCC
GCGCCAAGCGCGCCGAGAAAATCGACAGCCATGCGGCCGCAATTTTCCTGCAGGCGGCCCTCGATACGCTCGCCGGTGGC
GGCCTTTCCAACGACCTATTGTAA

Upstream 100 bases:

>100_bases
AAATGGGCAACTATGTCTTGCCGGGCAACAATTACCACGTTTACGACATCCCTCTGTTCTGGCGAAACCTGCAGGAAGAC
GTCGTCGCCCGGGTCGAAGC

Downstream 100 bases:

>100_bases
GTCCGCAGCGAACCCGTCAAAGCGTCCCCATGGCGACCGGTTTCGATCCCGAGAAGGCAGCGGCTTTCGTGCTCAGGCAC
GGCCACTCCGGCTGGCTCGA

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MAEPGRLITESALEYGDALPDGGVLLALDLGTKTIGTATSDAGWRFATAGKTLPRGRFGKDKAKLQEIVSSRNVAGLVLG
LPRNMDGSEGPRAQASRAYARNLAEAFGLPVLLWDERWSTQSAESAMIGQDMSRAKRAEKIDSHAAAIFLQAALDTLAGG
GLSNDLL

Sequences:

>Translated_167_residues
MAEPGRLITESALEYGDALPDGGVLLALDLGTKTIGTATSDAGWRFATAGKTLPRGRFGKDKAKLQEIVSSRNVAGLVLG
LPRNMDGSEGPRAQASRAYARNLAEAFGLPVLLWDERWSTQSAESAMIGQDMSRAKRAEKIDSHAAAIFLQAALDTLAGG
GLSNDLL
>Mature_166_residues
AEPGRLITESALEYGDALPDGGVLLALDLGTKTIGTATSDAGWRFATAGKTLPRGRFGKDKAKLQEIVSSRNVAGLVLGL
PRNMDGSEGPRAQASRAYARNLAEAFGLPVLLWDERWSTQSAESAMIGQDMSRAKRAEKIDSHAAAIFLQAALDTLAGGG
LSNDLL

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination [H]

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family [H]

Homologues:

Organism=Escherichia coli, GI1789318, Length=136, Percent_Identity=35.2941176470588, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337 [H]

Pfam domain/function: PF03652 UPF0081 [H]

EC number: NA

Molecular weight: Translated: 17584; Mature: 17453

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPGRLITESALEYGDALPDGGVLLALDLGTKTIGTATSDAGWRFATAGKTLPRGRFGK
CCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DKAKLQEIVSSRNVAGLVLGLPRNMDGSEGPRAQASRAYARNLAEAFGLPVLLWDERWST
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC
QSAESAMIGQDMSRAKRAEKIDSHAAAIFLQAALDTLAGGGLSNDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEPGRLITESALEYGDALPDGGVLLALDLGTKTIGTATSDAGWRFATAGKTLPRGRFGK
CCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCC
DKAKLQEIVSSRNVAGLVLGLPRNMDGSEGPRAQASRAYARNLAEAFGLPVLLWDERWST
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCC
QSAESAMIGQDMSRAKRAEKIDSHAAAIFLQAALDTLAGGGLSNDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA