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The map label for this gene is yliI [H]

Identifier: 85373280

GI number: 85373280

Start: 492140

End: 493324

Strand: Reverse

Name: yliI [H]

Synonym: ELI_02265

Alternate gene names: 85373280

Gene position: 493324-492140 (Counterclockwise)

Preceding gene: 85373283

Following gene: 85373279

Centisome position: 16.16

GC content: 65.65

Gene sequence:

>1185_bases
ATGATCCAGACACGCTTCACATCGCTCGCCCTTCTGTCGCTCCCGGCCATCGCCCTCGCAAGCTGCGGCAGCGCCTATTC
GGGGGATAGCGCCGAAGCGCAGTCGACCCCTAGTCCGACCGCGATGGAAGCCGATGCGCAAATAGGCCCCTTCGCCGTCA
GCGACATGGGAACGTTCGCCGAGCCCTGGGCCGCCGCTTTTGCGCCGGGCACGCACACGCTGTTCATTACCGAAAAGGCC
GGGACGATGAAATTCGTCGACACCCGCACCGGTCGTCTCGGGACGGTCACCGGCGTGCCGGAAGTGGACTATGGCGGTCA
GGGCGGTCTAGGCGATATCGCCTTTTTGCCCTCCGAAGCCGCCAACACGATCGACAGCCGCACGATCTATCTCAGCTGGG
CCGAAGCCGGCGCTGGCGACACGCGCGGTGCGGTCGTGGGCCGCGGCCAGCTTGCCTGCCAGCAAGCCGACGCCTGCACG
ATCGAAGATCTCGCCGTCATCTGGCGTCAGGCTCCGAAGGTCACCGGGCGCGGGCACTATTCGCACCGCATCGCCTTCTC
GCCCGACGAGCGATATATGTATGTCGCGAGCGGCGACCGGCAGAAGCAGGATCCGGCGCAGGACACCTCGAACACGCTGG
GGACGATCGTGCGGCTCAATCTCGACGGCAGCCCGGCGGCCAACAACCCGGTCGGCAGCGAGATCTGGTCCTACGGCCAT
CGCAACATTCTCGGCCTCGCTTTCGACGACGCGGGCCGCCTGTGGGATTTGGAACATGGGCCGGCCGGCGGTGACGAACT
CAATCTCGTCGAGCGCGGCGTCAATTACGGCTGGCCGGTGGTTTCGAATGGCGACAATTACAACGGCACGCCAATCCCGG
ACAACGATACCCGTCCGGACCTGCGCGCGCCCGTATTCGGCTGGACACCGGTGATCGCGCCGGGTGATATGATCTTCTAT
TCGGGGTCGATGTTCGGCGACTGGAGCGGCGACCTGTTGATCGCCGGGCTCAAGACGCAGGCCATCATCCACCTCGACAT
GGAAGGCACGTCGGCCGAAGAGATCGCGCGCTACGACTTCGGCGAGCGGCTGCGCGAAATCGTGCAGGGGCCGGACGGCG
CGATCTACGTGCTGGAAGACGGCGACGACGGGCGATTGCGCAAGCTGACGCCGAGCGCCAGCTAG

Upstream 100 bases:

>100_bases
CGGACCGGCCAAGGGCCCGCGCCCGGCCTCGTCGACGCCGAACACGCATCCTTGCGCTTCGGGCCGGGAAACGATTGCAT
CTTCGGGAGTTTCAGAAACC

Downstream 100 bases:

>100_bases
GCTCGCACAAACCCGATCTTGCTCGACAGCGCCGCTTCGCGGCCTTAACCGGCGCGCCCGATGGCGACGATCATCCCCTT
GTCTGCGGTCGAACCCGCAT

Product: dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MIQTRFTSLALLSLPAIALASCGSAYSGDSAEAQSTPSPTAMEADAQIGPFAVSDMGTFAEPWAAAFAPGTHTLFITEKA
GTMKFVDTRTGRLGTVTGVPEVDYGGQGGLGDIAFLPSEAANTIDSRTIYLSWAEAGAGDTRGAVVGRGQLACQQADACT
IEDLAVIWRQAPKVTGRGHYSHRIAFSPDERYMYVASGDRQKQDPAQDTSNTLGTIVRLNLDGSPAANNPVGSEIWSYGH
RNILGLAFDDAGRLWDLEHGPAGGDELNLVERGVNYGWPVVSNGDNYNGTPIPDNDTRPDLRAPVFGWTPVIAPGDMIFY
SGSMFGDWSGDLLIAGLKTQAIIHLDMEGTSAEEIARYDFGERLREIVQGPDGAIYVLEDGDDGRLRKLTPSAS

Sequences:

>Translated_394_residues
MIQTRFTSLALLSLPAIALASCGSAYSGDSAEAQSTPSPTAMEADAQIGPFAVSDMGTFAEPWAAAFAPGTHTLFITEKA
GTMKFVDTRTGRLGTVTGVPEVDYGGQGGLGDIAFLPSEAANTIDSRTIYLSWAEAGAGDTRGAVVGRGQLACQQADACT
IEDLAVIWRQAPKVTGRGHYSHRIAFSPDERYMYVASGDRQKQDPAQDTSNTLGTIVRLNLDGSPAANNPVGSEIWSYGH
RNILGLAFDDAGRLWDLEHGPAGGDELNLVERGVNYGWPVVSNGDNYNGTPIPDNDTRPDLRAPVFGWTPVIAPGDMIFY
SGSMFGDWSGDLLIAGLKTQAIIHLDMEGTSAEEIARYDFGERLREIVQGPDGAIYVLEDGDDGRLRKLTPSAS
>Mature_394_residues
MIQTRFTSLALLSLPAIALASCGSAYSGDSAEAQSTPSPTAMEADAQIGPFAVSDMGTFAEPWAAAFAPGTHTLFITEKA
GTMKFVDTRTGRLGTVTGVPEVDYGGQGGLGDIAFLPSEAANTIDSRTIYLSWAEAGAGDTRGAVVGRGQLACQQADACT
IEDLAVIWRQAPKVTGRGHYSHRIAFSPDERYMYVASGDRQKQDPAQDTSNTLGTIVRLNLDGSPAANNPVGSEIWSYGH
RNILGLAFDDAGRLWDLEHGPAGGDELNLVERGVNYGWPVVSNGDNYNGTPIPDNDTRPDLRAPVFGWTPVIAPGDMIFY
SGSMFGDWSGDLLIAGLKTQAIIHLDMEGTSAEEIARYDFGERLREIVQGPDGAIYVLEDGDDGRLRKLTPSAS

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=342, Percent_Identity=36.2573099415205, Blast_Score=205, Evalue=5e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 41912; Mature: 41912

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTRFTSLALLSLPAIALASCGSAYSGDSAEAQSTPSPTAMEADAQIGPFAVSDMGTFA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC
EPWAAAFAPGTHTLFITEKAGTMKFVDTRTGRLGTVTGVPEVDYGGQGGLGDIAFLPSEA
CCHHHHCCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCHH
ANTIDSRTIYLSWAEAGAGDTRGAVVGRGQLACQQADACTIEDLAVIWRQAPKVTGRGHY
HCCCCCEEEEEEECCCCCCCCCCEEEECCHHEECCCCCCCHHHHHHHHHHCCCCCCCCCC
SHRIAFSPDERYMYVASGDRQKQDPAQDTSNTLGTIVRLNLDGSPAANNPVGSEIWSYGH
CEEEEECCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHCCC
RNILGLAFDDAGRLWDLEHGPAGGDELNLVERGVNYGWPVVSNGDNYNGTPIPDNDTRPD
CEEEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
LRAPVFGWTPVIAPGDMIFYSGSMFGDWSGDLLIAGLKTQAIIHLDMEGTSAEEIARYDF
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHH
GERLREIVQGPDGAIYVLEDGDDGRLRKLTPSAS
HHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCC
>Mature Secondary Structure
MIQTRFTSLALLSLPAIALASCGSAYSGDSAEAQSTPSPTAMEADAQIGPFAVSDMGTFA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCC
EPWAAAFAPGTHTLFITEKAGTMKFVDTRTGRLGTVTGVPEVDYGGQGGLGDIAFLPSEA
CCHHHHCCCCCEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCHH
ANTIDSRTIYLSWAEAGAGDTRGAVVGRGQLACQQADACTIEDLAVIWRQAPKVTGRGHY
HCCCCCEEEEEEECCCCCCCCCCEEEECCHHEECCCCCCCHHHHHHHHHHCCCCCCCCCC
SHRIAFSPDERYMYVASGDRQKQDPAQDTSNTLGTIVRLNLDGSPAANNPVGSEIWSYGH
CEEEEECCCCCEEEEECCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHCCC
RNILGLAFDDAGRLWDLEHGPAGGDELNLVERGVNYGWPVVSNGDNYNGTPIPDNDTRPD
CEEEEEEECCCCCEEECCCCCCCCCCHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCC
LRAPVFGWTPVIAPGDMIFYSGSMFGDWSGDLLIAGLKTQAIIHLDMEGTSAEEIARYDF
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECEEEEEEEECCCCCHHHHHHHHH
GERLREIVQGPDGAIYVLEDGDDGRLRKLTPSAS
HHHHHHHHCCCCCEEEEEECCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]