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The map label for this gene is yhbO [C]

Identifier: 85373271

GI number: 85373271

Start: 483042

End: 483581

Strand: Reverse

Name: yhbO [C]

Synonym: ELI_02220

Alternate gene names: 85373271

Gene position: 483581-483042 (Counterclockwise)

Preceding gene: 85373275

Following gene: 85373270

Centisome position: 15.84

GC content: 60.0

Gene sequence:

>540_bases
ATGAAACGCGTCCTAATCATCGCCACCGACGGTTTCGAGCAATCGGAACTGATGAAACCCAAGAAGCGCCTGGAAGAAGC
CGGCATCGACACCACCGTCGCCAGCCTCGAGGAAGGTGAGATCACCGGGTGGAAGGACAAGAACTGGGGTGACAGCGTGA
AGGTCGATCTGACCGTCGAGGAAGTCTCCGCCGACGATTATGGCGCGCTGCTGCTGCCGGGCGGGCAGATCAACCCCGAC
GCCCTGCGCATGAATGACACCGTGATCGGCCTGATCCGCGAATTCAACGAAGCGAACAAGCCGATCGCCGCAATCTGTCA
CGCACCGTGGTTGCTCGCAGAAGCCAACATCATTCGCGATCGCACCGTCACCGGTTGGCCGTCGATCCGCACCGACCTCA
GCAATGCAGGCGCAAATGTGATCGACTCGGAGGCAGCAGTGGACGGAAATCTGATCACCGCGCGCAATCCGGACGACATC
CCGGCCTTTTCGAATGCCCTGATCGAACAGGTGCAGCAACGGGTCCCGGAGAACGCATAA

Upstream 100 bases:

>100_bases
TGTCCCGCTTGCCGCATCGAGGCCTCAACCCGTCGCCGCCTTGGAACGATTTGCGCCTTCATGCATTGGAAGAACAACAG
CAAATCAAGGAGTTACCCTT

Downstream 100 bases:

>100_bases
ACACTTATAACATAATACCTTTTTCCGGCCTCGCTGCTTCGTGCAGCGGGGCCTTTTTCATTCTCCCTCTTGCCAATTAC
TCAATTGTGGCACAAATATG

Product: protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKRVLIIATDGFEQSELMKPKKRLEEAGIDTTVASLEEGEITGWKDKNWGDSVKVDLTVEEVSADDYGALLLPGGQINPD
ALRMNDTVIGLIREFNEANKPIAAICHAPWLLAEANIIRDRTVTGWPSIRTDLSNAGANVIDSEAAVDGNLITARNPDDI
PAFSNALIEQVQQRVPENA

Sequences:

>Translated_179_residues
MKRVLIIATDGFEQSELMKPKKRLEEAGIDTTVASLEEGEITGWKDKNWGDSVKVDLTVEEVSADDYGALLLPGGQINPD
ALRMNDTVIGLIREFNEANKPIAAICHAPWLLAEANIIRDRTVTGWPSIRTDLSNAGANVIDSEAAVDGNLITARNPDDI
PAFSNALIEQVQQRVPENA
>Mature_179_residues
MKRVLIIATDGFEQSELMKPKKRLEEAGIDTTVASLEEGEITGWKDKNWGDSVKVDLTVEEVSADDYGALLLPGGQINPD
ALRMNDTVIGLIREFNEANKPIAAICHAPWLLAEANIIRDRTVTGWPSIRTDLSNAGANVIDSEAAVDGNLITARNPDDI
PAFSNALIEQVQQRVPENA

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=164, Percent_Identity=39.0243902439024, Blast_Score=121, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28571932, Length=181, Percent_Identity=31.4917127071823, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24653499, Length=174, Percent_Identity=32.183908045977, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19491; Mature: 19491

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLIIATDGFEQSELMKPKKRLEEAGIDTTVASLEEGEITGWKDKNWGDSVKVDLTVE
CCEEEEEEECCCCHHHHHCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
EVSADDYGALLLPGGQINPDALRMNDTVIGLIREFNEANKPIAAICHAPWLLAEANIIRD
ECCCCCCCEEEECCCCCCHHHEEECHHHHHHHHHHHHCCCCEEEHHCCCHHHHHCHHHCC
RTVTGWPSIRTDLSNAGANVIDSEAAVDGNLITARNPDDIPAFSNALIEQVQQRVPENA
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRVLIIATDGFEQSELMKPKKRLEEAGIDTTVASLEEGEITGWKDKNWGDSVKVDLTVE
CCEEEEEEECCCCHHHHHCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEE
EVSADDYGALLLPGGQINPDALRMNDTVIGLIREFNEANKPIAAICHAPWLLAEANIIRD
ECCCCCCCEEEECCCCCCHHHEEECHHHHHHHHHHHHCCCCEEEHHCCCHHHHHCHHHCC
RTVTGWPSIRTDLSNAGANVIDSEAAVDGNLITARNPDDIPAFSNALIEQVQQRVPENA
CCCCCCCHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]