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The map label for this gene is 85373002

Identifier: 85373002

GI number: 85373002

Start: 211897

End: 212403

Strand: Reverse

Name: 85373002

Synonym: ELI_00875

Alternate gene names: NA

Gene position: 212403-211897 (Counterclockwise)

Preceding gene: 85373003

Following gene: 85373001

Centisome position: 6.96

GC content: 65.29

Gene sequence:

>507_bases
ATGAGCCTGCCCCGCTCGCTACGCCGTCCGCTGCTGCTTTCGGGCCTCGTCCTGCTGCCGCTCGCCTGGGCGCCGCTCGA
TGCCTTCAGCAAGGACCACGCCTTTCTCATCAATGCGAGCCCGAGCCTCCCCAACTGGGCGTTCTGGCTCGACAAGAAGG
CAGCGATCCAGCGCGGCAGCCTTATTTTCTTCGAGCCGCCGCGAAGCGAACTCGTCGAAAGACATTTCGGTGAAGGGCCG
CAGATGTTCGGCAAGCGCGTGCTGGGCATGCCGGGCGATGTCGTGCGCCATGAGGGCGACGCGGTCTTCATCAACGGCAG
GAAGGTTGCGAGCCTGCTCAAGGTCACGCGCCTCGGCGTTCCGCTCACGCGGGGCCCCGAAGGCGTGATCCCCGAGGGTT
GCTACTATACCGGCACCAGCCATCCACGCGGGCTCGACAGTCGCTACGGCGAAATCGGCTTCGTCTGTCGTGGGCAGATC
CTCGGTAGCGGGAGGACGATCCTGTGA

Upstream 100 bases:

>100_bases
TGGTGCTCGTCGCCGAGGCAGTGCTCGCCGGGGCAGCCGAAGATGCGACCCCCGAACTCGAACGGCGCATTGCGGACGAG
CTCGCCGGGGAGAAGCAGCC

Downstream 100 bases:

>100_bases
TGCGCCCCCTCCTTCCGCTTGGCGCCCTTCTCCTCGCCGCGCTTCCTGCGAGCCTGCAGGCACGAGACTATGGCCAGCGC
GGCGCGGTGTTTCCGGTGAT

Product: putative F pilus assembly protein traF

Products: NA

Alternate protein names: Peptidase; Conjugal Transfer Protein; Type IV Secretory Pathway Protease TraF-Like; Type IV Secretory Pathway Protease TraF-Like Protein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MSLPRSLRRPLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKKAAIQRGSLIFFEPPRSELVERHFGEGP
QMFGKRVLGMPGDVVRHEGDAVFINGRKVASLLKVTRLGVPLTRGPEGVIPEGCYYTGTSHPRGLDSRYGEIGFVCRGQI
LGSGRTIL

Sequences:

>Translated_168_residues
MSLPRSLRRPLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKKAAIQRGSLIFFEPPRSELVERHFGEGP
QMFGKRVLGMPGDVVRHEGDAVFINGRKVASLLKVTRLGVPLTRGPEGVIPEGCYYTGTSHPRGLDSRYGEIGFVCRGQI
LGSGRTIL
>Mature_167_residues
SLPRSLRRPLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKKAAIQRGSLIFFEPPRSELVERHFGEGPQ
MFGKRVLGMPGDVVRHEGDAVFINGRKVASLLKVTRLGVPLTRGPEGVIPEGCYYTGTSHPRGLDSRYGEIGFVCRGQIL
GSGRTIL

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18462; Mature: 18331

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPRSLRRPLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKKAAIQRGS
CCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHCCCC
LIFFEPPRSELVERHFGEGPQMFGKRVLGMPGDVVRHEGDAVFINGRKVASLLKVTRLGV
EEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHEEECCCEEEECCHHHHHHHHHHHHCC
PLTRGPEGVIPEGCYYTGTSHPRGLDSRYGEIGFVCRGQILGSGRTIL
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure 
SLPRSLRRPLLLSGLVLLPLAWAPLDAFSKDHAFLINASPSLPNWAFWLDKKAAIQRGS
CCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEECCHHHHCCCC
LIFFEPPRSELVERHFGEGPQMFGKRVLGMPGDVVRHEGDAVFINGRKVASLLKVTRLGV
EEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCHHEEECCCEEEECCHHHHHHHHHHHHCC
PLTRGPEGVIPEGCYYTGTSHPRGLDSRYGEIGFVCRGQILGSGRTIL
CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA