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The map label for this gene is ybaR [H]

Identifier: 85372873

GI number: 85372873

Start: 53822

End: 55423

Strand: Reverse

Name: ybaR [H]

Synonym: ELI_00230

Alternate gene names: 85372873

Gene position: 55423-53822 (Counterclockwise)

Preceding gene: 85372875

Following gene: 85372868

Centisome position: 1.82

GC content: 63.86

Gene sequence:

>1602_bases
ATGCGCAGGGTTGTGCTGCACTGCAACATTGCCTACCTGCGCCCGCTCATTCTTCCGGTGCCGCTTGCGAGCGATTTCCC
GCACCGGACAGCTCACAGGACTGGTTTCATGTATTCACCCGCCGCGTTCAAACGCGACTGGCTCTCCAATGTGCGCGCCG
ACTTGCTGGCCGGGATCGTCGTAAGCCTCGCGCTCATCCCCGAGGCGATCGGTTTCTCGATCATCGCCGGGGTCGATCCG
CGCGTGGGGCTCTATGCCTCGATCGCGATTGCGATGATCATCGCCTTCACTGGCGGTCGGCCCGGCATGATCTCGGCGGC
GACGGCGGCGGTCGCCGTCGTGGTAATCCCGCTGGTCCGCGATTACGGGGTCGAATACCTTTTCGCCGCGACGATACTGA
TGGGTATATTCCAGGGCATCGCTGCCGTGTTGCGACTGGACTTGCTGATGCAATTCGTCGGCCGCGCCGTCATCACCGGC
TTCGTCAACGCGCTGGCGATCCTGATCTTTATGGCGCAGTTGCCGGAACTCACCAATGTCGGGTGGGAAACCTATGCCAT
GGTCGCAGTGGCGCTGGCGATCATCTACCTGCTGCCGCGCGTGACGACGGCTGTGCCGTCACCCCTGGTCGCAATCGTGC
TGCTCACGCTCCTGACGATCTGGATCGATGCGCCGGTCAACACAGTCTCCGACATGGGCGAACTGCCGGAAGGCCTGCCC
TATTTCGTCTGGCCCGACGTGCCGCTGACGTGGGAGACCCTGCAGATCATCGCTCCCTATTCGGCAACCATGGCAGCGGT
CGGCCTGATCGAGAGCCTGCTGACTGCGCGGATCGTCGACGATATGACGCACACCGGCAGCAACAAGCGGCGCGAGACCT
GGGGCCAGGGCGTGGCCAATATCGGCGCAGCGCTCGTCGGCGGCATGGGCGGCTGCGCCATGATCGGGCAATCCGTGATC
AATGTCACCAGCGGCGGGCGTGGACGGCTTTCGGCGCTGACCGCAGGGGTGACGCTGTTGCTCCTCCTTTGGCTGCTCGG
GCCGATCGTGGGCCAGATCCCGATGCCCGCGCTGGTCGCGGTGATGATCATGGTCTCGATCGGGACCTTCTCATGGACCT
CGATCCCCAACCTGCGCCATCATCCGTGGCAGGCTTCGGTCGTCATGCTGGCAACGGTTGCTGTCGTGGTGACGACACAC
AACCTGGCGCTCGGCGTGCTGGTCGGCGTATTGCTCTCCGGCATCTTCTTCGCCGCCATGGTGATGAACCTGTTCGAAGT
CACTCGCACCCGCGAAGGCAATACCGCCACCTATACCGCCAGGGGGCAGATCTTTTTCGCCAGCGTGGAACGTTTCGAAG
CCGCGCTCGGGCCGGAAAGCAAACAGCCCGACCCTGCCGATCACGTTATCATCGACGTGTCCGACGCGCATTTCTGGGAC
ATCTCAGGCGTCGGCGCACTCGACAAGGTGGTCGAGCGCATGCGCGCCAACGGACGCAGCGTGCAGGTGGTGGGCCTCAA
TGAAGCCAGCGCCGACATGGTCGATCGCCATGCCGTGACCGATCGGACGGGCGTGGAACTGGGGCTGGCGCCGCACCCTT
AG

Upstream 100 bases:

>100_bases
TTCGGCCACTAAATCAGCCCTGCTGGTGCCTGACAACCTGACCCTTCACCCAATCGACAAACCGGCAATGCCCTTCTGCA
AGGCGCAATGGTGAATTCGC

Downstream 100 bases:

>100_bases
AGCGTGGCGGTAGCCTGCAACTGCTTGAGGATCGCCAGCGCTTCCTCGGCGCGGTCTGCCGGCACGAAAGCATGATCGTG
GCGCAGGGCGGCAACCATAT

Product: putative sulfate permease protein

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MRRVVLHCNIAYLRPLILPVPLASDFPHRTAHRTGFMYSPAAFKRDWLSNVRADLLAGIVVSLALIPEAIGFSIIAGVDP
RVGLYASIAIAMIIAFTGGRPGMISAATAAVAVVVIPLVRDYGVEYLFAATILMGIFQGIAAVLRLDLLMQFVGRAVITG
FVNALAILIFMAQLPELTNVGWETYAMVAVALAIIYLLPRVTTAVPSPLVAIVLLTLLTIWIDAPVNTVSDMGELPEGLP
YFVWPDVPLTWETLQIIAPYSATMAAVGLIESLLTARIVDDMTHTGSNKRRETWGQGVANIGAALVGGMGGCAMIGQSVI
NVTSGGRGRLSALTAGVTLLLLLWLLGPIVGQIPMPALVAVMIMVSIGTFSWTSIPNLRHHPWQASVVMLATVAVVVTTH
NLALGVLVGVLLSGIFFAAMVMNLFEVTRTREGNTATYTARGQIFFASVERFEAALGPESKQPDPADHVIIDVSDAHFWD
ISGVGALDKVVERMRANGRSVQVVGLNEASADMVDRHAVTDRTGVELGLAPHP

Sequences:

>Translated_533_residues
MRRVVLHCNIAYLRPLILPVPLASDFPHRTAHRTGFMYSPAAFKRDWLSNVRADLLAGIVVSLALIPEAIGFSIIAGVDP
RVGLYASIAIAMIIAFTGGRPGMISAATAAVAVVVIPLVRDYGVEYLFAATILMGIFQGIAAVLRLDLLMQFVGRAVITG
FVNALAILIFMAQLPELTNVGWETYAMVAVALAIIYLLPRVTTAVPSPLVAIVLLTLLTIWIDAPVNTVSDMGELPEGLP
YFVWPDVPLTWETLQIIAPYSATMAAVGLIESLLTARIVDDMTHTGSNKRRETWGQGVANIGAALVGGMGGCAMIGQSVI
NVTSGGRGRLSALTAGVTLLLLLWLLGPIVGQIPMPALVAVMIMVSIGTFSWTSIPNLRHHPWQASVVMLATVAVVVTTH
NLALGVLVGVLLSGIFFAAMVMNLFEVTRTREGNTATYTARGQIFFASVERFEAALGPESKQPDPADHVIIDVSDAHFWD
ISGVGALDKVVERMRANGRSVQVVGLNEASADMVDRHAVTDRTGVELGLAPHP
>Mature_533_residues
MRRVVLHCNIAYLRPLILPVPLASDFPHRTAHRTGFMYSPAAFKRDWLSNVRADLLAGIVVSLALIPEAIGFSIIAGVDP
RVGLYASIAIAMIIAFTGGRPGMISAATAAVAVVVIPLVRDYGVEYLFAATILMGIFQGIAAVLRLDLLMQFVGRAVITG
FVNALAILIFMAQLPELTNVGWETYAMVAVALAIIYLLPRVTTAVPSPLVAIVLLTLLTIWIDAPVNTVSDMGELPEGLP
YFVWPDVPLTWETLQIIAPYSATMAAVGLIESLLTARIVDDMTHTGSNKRRETWGQGVANIGAALVGGMGGCAMIGQSVI
NVTSGGRGRLSALTAGVTLLLLLWLLGPIVGQIPMPALVAVMIMVSIGTFSWTSIPNLRHHPWQASVVMLATVAVVVTTH
NLALGVLVGVLLSGIFFAAMVMNLFEVTRTREGNTATYTARGQIFFASVERFEAALGPESKQPDPADHVIIDVSDAHFWD
ISGVGALDKVVERMRANGRSVQVVGLNEASADMVDRHAVTDRTGVELGLAPHP

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Escherichia coli, GI87081859, Length=504, Percent_Identity=27.9761904761905, Blast_Score=131, Evalue=9e-32,
Organism=Caenorhabditis elegans, GI86565215, Length=539, Percent_Identity=19.4805194805195, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86564196, Length=616, Percent_Identity=21.2662337662338, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17566848, Length=537, Percent_Identity=21.9739292364991, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358229, Length=377, Percent_Identity=23.6074270557029, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21358633, Length=479, Percent_Identity=22.7557411273486, Blast_Score=72, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018045
- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 56834; Mature: 56834

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVVLHCNIAYLRPLILPVPLASDFPHRTAHRTGFMYSPAAFKRDWLSNVRADLLAGIV
CCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHH
VSLALIPEAIGFSIIAGVDPRVGLYASIAIAMIIAFTGGRPGMISAATAAVAVVVIPLVR
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DYGVEYLFAATILMGIFQGIAAVLRLDLLMQFVGRAVITGFVNALAILIFMAQLPELTNV
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
GWETYAMVAVALAIIYLLPRVTTAVPSPLVAIVLLTLLTIWIDAPVNTVSDMGELPEGLP
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
YFVWPDVPLTWETLQIIAPYSATMAAVGLIESLLTARIVDDMTHTGSNKRRETWGQGVAN
EEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGAALVGGMGGCAMIGQSVINVTSGGRGRLSALTAGVTLLLLLWLLGPIVGQIPMPALVA
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VMIMVSIGTFSWTSIPNLRHHPWQASVVMLATVAVVVTTHNLALGVLVGVLLSGIFFAAM
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMNLFEVTRTREGNTATYTARGQIFFASVERFEAALGPESKQPDPADHVIIDVSDAHFWD
HHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEC
ISGVGALDKVVERMRANGRSVQVVGLNEASADMVDRHAVTDRTGVELGLAPHP
CCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCC
>Mature Secondary Structure
MRRVVLHCNIAYLRPLILPVPLASDFPHRTAHRTGFMYSPAAFKRDWLSNVRADLLAGIV
CCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHH
VSLALIPEAIGFSIIAGVDPRVGLYASIAIAMIIAFTGGRPGMISAATAAVAVVVIPLVR
HHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
DYGVEYLFAATILMGIFQGIAAVLRLDLLMQFVGRAVITGFVNALAILIFMAQLPELTNV
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
GWETYAMVAVALAIIYLLPRVTTAVPSPLVAIVLLTLLTIWIDAPVNTVSDMGELPEGLP
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
YFVWPDVPLTWETLQIIAPYSATMAAVGLIESLLTARIVDDMTHTGSNKRRETWGQGVAN
EEECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IGAALVGGMGGCAMIGQSVINVTSGGRGRLSALTAGVTLLLLLWLLGPIVGQIPMPALVA
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VMIMVSIGTFSWTSIPNLRHHPWQASVVMLATVAVVVTTHNLALGVLVGVLLSGIFFAAM
HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VMNLFEVTRTREGNTATYTARGQIFFASVERFEAALGPESKQPDPADHVIIDVSDAHFWD
HHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEC
ISGVGALDKVVERMRANGRSVQVVGLNEASADMVDRHAVTDRTGVELGLAPHP
CCCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]