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The map label for this gene is ribE [H]

Identifier: 85372856

GI number: 85372856

Start: 41729

End: 42349

Strand: Reverse

Name: ribE [H]

Synonym: ELI_00145

Alternate gene names: 85372856

Gene position: 42349-41729 (Counterclockwise)

Preceding gene: 85372857

Following gene: 85372851

Centisome position: 1.39

GC content: 63.77

Gene sequence:

>621_bases
ATGTTTACCGGTATCGTCACCGCCATCGGCACCATCGAAAGCGCAGAGCAACTAAGCGACCTGCGCGTGCGCGTGCGCTG
CCCTTACGACCCGGCGGACATCGCCATCGGCGCGTCGATCGCCTGCTCGGGCGCGTGCATGACGGTGGTCGATCGCGGCG
GCCGGGAAGGCGATGCCTGGTTTGCCGTCGACGTTTCGGGCGAAAGCGTTTCGAAGACCGCGAGCGACATGTGGCAGGTC
GGCGGCGCACTCAATCTCGAAACCGCGCTCAAGCTGGGCGACGAACTGGGCGGACATATCGTGACCGGTCACGTCGATGC
GGTCGGCACTGTCGAAAGCGCGGTTGAGGTGGGCGGCTCGCACACGGTGAAGATCCGCGCGCCGAAGGATCTGGCGCCCT
ATATCGCGCCCAAGGGCTCGATAACCGTCGACGGTGTCTCGCTTACGGTCAACGAAGTGACAGACCACGACGACGGGTCG
TGCACCTTCTCGCTCAATATCATCCCGCATACATGGGAAGTCACGACGCTCGGCCGGATCGAGGCCGGGTCCGAGGTCAA
TCTCGAAATAGATGTGCTTGCACGCTACCTGAGGCGCATGGAGAGCCTGCGTGCGGCCTGA

Upstream 100 bases:

>100_bases
CCTCACGTCCGCCCACGGAAGCTGGAAACTGGTCGAACGCCGCCAGCTTGGCAGCGATTGCTACGAAGCCTATGAGCGGC
AACGAAGCTAAGGAGCACGC

Downstream 100 bases:

>100_bases
CGCAAGGTAAGTCCGTCAGTTCACTTCGGCATAGGCCGTTTCGACCTTGGTCATCTGATTGCTCGATTGCTCGCCGAGCG
CCATGAACGCGCCGAGGGCT

Product: riboflavin synthase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MFTGIVTAIGTIESAEQLSDLRVRVRCPYDPADIAIGASIACSGACMTVVDRGGREGDAWFAVDVSGESVSKTASDMWQV
GGALNLETALKLGDELGGHIVTGHVDAVGTVESAVEVGGSHTVKIRAPKDLAPYIAPKGSITVDGVSLTVNEVTDHDDGS
CTFSLNIIPHTWEVTTLGRIEAGSEVNLEIDVLARYLRRMESLRAA

Sequences:

>Translated_206_residues
MFTGIVTAIGTIESAEQLSDLRVRVRCPYDPADIAIGASIACSGACMTVVDRGGREGDAWFAVDVSGESVSKTASDMWQV
GGALNLETALKLGDELGGHIVTGHVDAVGTVESAVEVGGSHTVKIRAPKDLAPYIAPKGSITVDGVSLTVNEVTDHDDGS
CTFSLNIIPHTWEVTTLGRIEAGSEVNLEIDVLARYLRRMESLRAA
>Mature_206_residues
MFTGIVTAIGTIESAEQLSDLRVRVRCPYDPADIAIGASIACSGACMTVVDRGGREGDAWFAVDVSGESVSKTASDMWQV
GGALNLETALKLGDELGGHIVTGHVDAVGTVESAVEVGGSHTVKIRAPKDLAPYIAPKGSITVDGVSLTVNEVTDHDDGS
CTFSLNIIPHTWEVTTLGRIEAGSEVNLEIDVLARYLRRMESLRAA

Specific function: Riboflavin synthase is a bifunctional enzyme complex catalyzing the formation of riboflavin from 5-amino-6-(1'-D)- ribityl-amino-2,4(1H,3H)-pyrimidinedione and L-3,4-dihydrohy-2- butanone-4-phosphate via 6,7-dimethyl-8-lumazine. The alpha subunit catalyze

COG id: COG0307

COG function: function code H; Riboflavin synthase alpha chain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 lumazine-binding repeats [H]

Homologues:

Organism=Escherichia coli, GI1787952, Length=194, Percent_Identity=34.5360824742268, Blast_Score=100, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319733, Length=219, Percent_Identity=29.2237442922374, Blast_Score=86, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001783
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00677 Lum_binding [H]

EC number: =2.5.1.9 [H]

Molecular weight: Translated: 21640; Mature: 21640

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: PS00693 LUM_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTGIVTAIGTIESAEQLSDLRVRVRCPYDPADIAIGASIACSGACMTVVDRGGREGDAW
CCCCCEEHHHCHHHHHHHCCCEEEEECCCCCHHEEECCEEECCCCEEEEECCCCCCCCEE
FAVDVSGESVSKTASDMWQVGGALNLETALKLGDELGGHIVTGHVDAVGTVESAVEVGGS
EEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCC
HTVKIRAPKDLAPYIAPKGSITVDGVSLTVNEVTDHDDGSCTFSLNIIPHTWEVTTLGRI
EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEECCEEEEEEEEEE
EAGSEVNLEIDVLARYLRRMESLRAA
CCCCCCEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFTGIVTAIGTIESAEQLSDLRVRVRCPYDPADIAIGASIACSGACMTVVDRGGREGDAW
CCCCCEEHHHCHHHHHHHCCCEEEEECCCCCHHEEECCEEECCCCEEEEECCCCCCCCEE
FAVDVSGESVSKTASDMWQVGGALNLETALKLGDELGGHIVTGHVDAVGTVESAVEVGGS
EEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHCCCC
HTVKIRAPKDLAPYIAPKGSITVDGVSLTVNEVTDHDDGSCTFSLNIIPHTWEVTTLGRI
EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEECCEEEEEEEEEE
EAGSEVNLEIDVLARYLRRMESLRAA
CCCCCCEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8144477 [H]