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The map label for this gene is ybfF [C]

Identifier: 85372832

GI number: 85372832

Start: 10683

End: 11807

Strand: Direct

Name: ybfF [C]

Synonym: ELI_00025

Alternate gene names: 85372832

Gene position: 10683-11807 (Clockwise)

Preceding gene: 85372830

Following gene: 85372833

Centisome position: 0.35

GC content: 63.56

Gene sequence:

>1125_bases
ATGTACGCATACAAGCTGGATGAATTTGCGCAGCAAGCGGGCAGGCTCGATTGCGCCATCATCGTCCCGATCCTGAACGA
AGCCGCCAATATCCAGCCGCTGATCGAGAAGATCGGTACCGTTCTGACCGGTTACGATGCCGAAATCATTTTCGTCGATG
ACGGTTCGACCGACGGCTCGCTCGAAATTCTCGAAAGCATAGCTGCTGCCAATCGCTCGATCCGCGTGATCCGCCGCATC
GGCAGGCGGGGCCTTTCCTCGGCAGTCGTCGAAGGCTTTCTTTCCACCGTCGCCCCGGTCGTGGCGGTGATGGATGGTGA
CCTGCAACACGACGAGAGCGTCCTGCCTGCAATGATCGCAGCCCTGCAATCGGGCGAAGCGGACCTCGCCTATGGCAGCC
GCTATGCCGGTGGTGGCTCGGTCGGAGACTGGGCCGCCGATCGGCTGATGATCAGCAATGTCGCCACCCGCATGGCCGGC
AGCGTGATGAAGACTCCGCTGAGCGATCCGATGAGCGGCTTTTTCGCCATCCGCCGCGAACTGTTCCTCGATATCGCTCC
GCGCCTGTCGCAGGCGGGGTACAAGATTCTGCTCGATATCGTCGCCTCGCATCCCGAGCCGATTCGGGTGAAGCAGGTGC
CCTATAAATTCCGCACCCGCACCGCCGGCGAGTCCAAGCTCGATAGCATGGTGGTGCTCGAATATGTCGAGCTGCTGCTG
GAAAAGCTCGTGGGGCGGCTGGTGCCGGTCAAGCTGCTGATGTTCGGCGCGGTCGGGCTGGTCGGTACGCTGGTCCACCT
GGCGCTCCTCTGGGGCGCGCTCACGGGGCTGGGGGCGAGCTTCGCCATCGCCCAGGGCAGCGCGACGCTCGGCGCGATGA
CGTTCAACTTCGCGCTCAACAACGTGTTCACCTATCGCGACCGCAAGCTGACGGGCTGGCGCTGGGTGACCGGCTGGCTC
AGCTTCTGCGCGGCCTGCGGCATCGGCGCGGTAGCCAATGTCGGCATCGGCACGCTGCTCTATACCGAGGCGTGGTCCTG
GTGGATCGCCGGTCTTGCCGGCGCGCTGATCGGCTCGGTCTGGAATTACGCGGCGACATCATGGCTGACCTGGCGCAAAC
GCTGA

Upstream 100 bases:

>100_bases
CGACCGATCGAAGGCCCCGAATGGCAGCGATGTCTTAAATCATCATTAACCATCTCTCCCTATCCGGTAAGCCTGACTGC
GGCGACGGGGCCTAGACACA

Downstream 100 bases:

>100_bases
CCTCTCGCCCCGCGCAATGGGGGTGGCTCCGCGAGGGCTCGCTGAGCCTCGGCTTGGCGCTGGCACTCGCCGCGTTGCTG
ATCCGCTATCCCGCTTTCGG

Product: putative dolichol-phosphate mannosyltransferase

Products: NA

Alternate protein names: Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase; Apolipo; Dolichol Monophosphate Mannose Synthase; Dolichyl-Phosphate-Mannose Synthase; GtrA-Like Protein; Glycosyl Transferase Family 2 Protein; Cell Wall Biosynthesis Glycosyltransferase; GtrA Family Protein; Polyprenol Phosphate Mannosyl Transferase; Family 2 Glycosyl Transferase; Dolichol-Phosphate-Mannosyltransferase Related Protein; Dolichol-Phosphate Mannosyltransferase Family Protein; Glycosyltransferase Protein; UndP-Glycosyltransferase; Group Glycosyltransferase; Family 2 Glycosyltransferase; Dolichol-Phosphate-Mannosyltransferase; Polyprenol-Phosphate Mannosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Group 2 Family Glycosyltransferase; Dolichyl Phosphoryl Mannose Synthase; Group 2 Family Glycosyl Transferase; Prenol Monophospho-Mannose Synthase; GAF Sensor Protein; Dolichyl-Phosphate Hexose Synthase; Glycosyltransferase Group 2 Family Protein; Undecaprenol Glycosyltransferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Monosaccharide Translocase; Dolichol-P-Glucose Synthetase

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MYAYKLDEFAQQAGRLDCAIIVPILNEAANIQPLIEKIGTVLTGYDAEIIFVDDGSTDGSLEILESIAAANRSIRVIRRI
GRRGLSSAVVEGFLSTVAPVVAVMDGDLQHDESVLPAMIAALQSGEADLAYGSRYAGGGSVGDWAADRLMISNVATRMAG
SVMKTPLSDPMSGFFAIRRELFLDIAPRLSQAGYKILLDIVASHPEPIRVKQVPYKFRTRTAGESKLDSMVVLEYVELLL
EKLVGRLVPVKLLMFGAVGLVGTLVHLALLWGALTGLGASFAIAQGSATLGAMTFNFALNNVFTYRDRKLTGWRWVTGWL
SFCAACGIGAVANVGIGTLLYTEAWSWWIAGLAGALIGSVWNYAATSWLTWRKR

Sequences:

>Translated_374_residues
MYAYKLDEFAQQAGRLDCAIIVPILNEAANIQPLIEKIGTVLTGYDAEIIFVDDGSTDGSLEILESIAAANRSIRVIRRI
GRRGLSSAVVEGFLSTVAPVVAVMDGDLQHDESVLPAMIAALQSGEADLAYGSRYAGGGSVGDWAADRLMISNVATRMAG
SVMKTPLSDPMSGFFAIRRELFLDIAPRLSQAGYKILLDIVASHPEPIRVKQVPYKFRTRTAGESKLDSMVVLEYVELLL
EKLVGRLVPVKLLMFGAVGLVGTLVHLALLWGALTGLGASFAIAQGSATLGAMTFNFALNNVFTYRDRKLTGWRWVTGWL
SFCAACGIGAVANVGIGTLLYTEAWSWWIAGLAGALIGSVWNYAATSWLTWRKR
>Mature_374_residues
MYAYKLDEFAQQAGRLDCAIIVPILNEAANIQPLIEKIGTVLTGYDAEIIFVDDGSTDGSLEILESIAAANRSIRVIRRI
GRRGLSSAVVEGFLSTVAPVVAVMDGDLQHDESVLPAMIAALQSGEADLAYGSRYAGGGSVGDWAADRLMISNVATRMAG
SVMKTPLSDPMSGFFAIRRELFLDIAPRLSQAGYKILLDIVASHPEPIRVKQVPYKFRTRTAGESKLDSMVVLEYVELLL
EKLVGRLVPVKLLMFGAVGLVGTLVHLALLWGALTGLGASFAIAQGSATLGAMTFNFALNNVFTYRDRKLTGWRWVTGWL
SFCAACGIGAVANVGIGTLLYTEAWSWWIAGLAGALIGSVWNYAATSWLTWRKR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=228, Percent_Identity=28.5087719298246, Blast_Score=95, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71999402, Length=225, Percent_Identity=29.7777777777778, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6325441, Length=249, Percent_Identity=36.144578313253, Blast_Score=152, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24585265, Length=227, Percent_Identity=25.9911894273128, Blast_Score=94, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40340; Mature: 40340

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAYKLDEFAQQAGRLDCAIIVPILNEAANIQPLIEKIGTVLTGYDAEIIFVDDGSTDGS
CCCCCHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LEILESIAAANRSIRVIRRIGRRGLSSAVVEGFLSTVAPVVAVMDGDLQHDESVLPAMIA
HHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALQSGEADLAYGSRYAGGGSVGDWAADRLMISNVATRMAGSVMKTPLSDPMSGFFAIRRE
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFLDIAPRLSQAGYKILLDIVASHPEPIRVKQVPYKFRTRTAGESKLDSMVVLEYVELLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHH
EKLVGRLVPVKLLMFGAVGLVGTLVHLALLWGALTGLGASFAIAQGSATLGAMTFNFALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHH
NVFTYRDRKLTGWRWVTGWLSFCAACGIGAVANVGIGTLLYTEAWSWWIAGLAGALIGSV
CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WNYAATSWLTWRKR
HHHHHHHHHHCCCC
>Mature Secondary Structure
MYAYKLDEFAQQAGRLDCAIIVPILNEAANIQPLIEKIGTVLTGYDAEIIFVDDGSTDGS
CCCCCHHHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
LEILESIAAANRSIRVIRRIGRRGLSSAVVEGFLSTVAPVVAVMDGDLQHDESVLPAMIA
HHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ALQSGEADLAYGSRYAGGGSVGDWAADRLMISNVATRMAGSVMKTPLSDPMSGFFAIRRE
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFLDIAPRLSQAGYKILLDIVASHPEPIRVKQVPYKFRTRTAGESKLDSMVVLEYVELLL
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHH
EKLVGRLVPVKLLMFGAVGLVGTLVHLALLWGALTGLGASFAIAQGSATLGAMTFNFALN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCHHHHHHHHHHHH
NVFTYRDRKLTGWRWVTGWLSFCAACGIGAVANVGIGTLLYTEAWSWWIAGLAGALIGSV
CEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
WNYAATSWLTWRKR
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA