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The map label for this gene is oxaA [H]

Identifier: 85060407

GI number: 85060407

Start: 4168123

End: 4169766

Strand: Reverse

Name: oxaA [H]

Synonym: SG2429

Alternate gene names: 85060407

Gene position: 4169766-4168123 (Counterclockwise)

Preceding gene: 85060408

Following gene: 85060406

Centisome position: 99.97

GC content: 55.9

Gene sequence:

>1644_bases
ATGGATTCGCAACGCAATCTTCTTGTCATCGCTCTGCTGTTCGTGTCTTTCATGATCTGGCAGGCCTGGCAGACGGACCA
TGCTCCTACGCCTACCGCCCAGACCACGCAACAGACCGCGAACACCACTGCGGCAGACCCGAACAGCCAGGGTGTGCCCG
CCAGCGGACAAGGCCAGCTCATTACGGTTAAAACCGACGTGCTGTCGCTGAAAATCAACACTCGCGGCGGTGACATCGAA
CAGGCTTTCCTGCTATCCTATCCCGATAAACTGGGTTCACCGCAGCCTTTCCATTTGCTGGAAACGTCCCCGGAATTCGT
CTATCAGGCGCAAAGCGGCCTGACAGGCAAAAACGGCCCGGACAATCCCGCCAACGGCGAGCGCCCGCTGTTTACCACGA
ACCAGGACACCTATGTTCTGGCGGATAACCAGAGCGAATTGCGCGTGCCGTTGACCTACACCACCCCTGACGGCGTGGTG
TACACCAAGGCCTTTATTCTGAAACGCGGCGATTTCGCGTTGAATGTCAATTACGATATTAATAACGCCAGCGCGCAGCC
GCTCGAGCTGACGTTATTCGGTCAGTTGAAGCAATCCATTGATTTGCCCAAGGCGCGTAATACCGACAGCAGCAACTTCG
CGCTGCACACCTACCGTGGCGCGGCCTATTCCACCACCGACGACAAATATCAGAAGTACAGCTTCAAGGATATCAAAGGC
GAGAACCTGAGCGTCAGCACCGAAGGCGGCTGGGTCGCCATGCTCCAGCAGTATTTCGCCACGGCCTGGGTGCCTTTCAC
TCCGGGTAAAAACACGTTCTACACCTCGGACTTAGGCAACGGCCTGGCGGCGGTCGGCTTCAAATCCGCCCCCGTCACCG
TCGCGGCCGGCGGCCAAAGTGAGCTTAAAGCCACGTTGTGGCTCGGTCCTGAGATTCAGGACAAGATGGCGGCCATAGCC
CCGCATCTGGATCTGGCGGTCGATTACGGCTGGCTATGGTTTATTTCCCAACCGCTGTTCAAGCTGCTGAAATTCATCCA
CAGCTATATCGGCAACTGGGGCTTCTCCATCATTATCATCACCTTCATCGTGCGCGGCATCATGTACCCGCTGACCAAGG
CGCAGTACACCTCGATGGCCAAGATGCGGATGCTGCAACCGAAACTGGCGGCGATGCGCGAGCGTCTGGGTGACGATAAG
CAACGGCAAAGCCAGGAAATGATGGCGCTGTACAAGGCGGAAAAGGTCAATCCGCTGGGCGGCTGTCTGCCACTGGTGAT
CCAGATGCCCATCTTTCTAGCGCTTTATTACATGCTGTCAGGCTCCATTGAATTGCGCCATGCGCCGTTCGCGCTGTGGA
TCCATGACCTGTCGGCACAAGACCCGTACTACATCCTGCCGCTCTTGATGGGCATTACCATGTTCTTCATCCAGAAGATG
TCGCCCACCACCGTCACTGATCTGATGCAGCAGAAGATCATGACTTTTATGCCGGTCATTTTCACCGTGTTCTTCCTGTG
GTTCCCGTCAGGTCTGGTGTTGTACTATATCGTCAGCAACCTGGTGACCATCATCCAGCAGCAGCTTATTTATCGCGGCC
TGGAAAAGCGCGGCCTGCATAGCAGGGATAAAAAAGCCAAGTAA

Upstream 100 bases:

>100_bases
GTTGGTTGACATTAAAACGCGTATTAAAATGCCACCCTTTGAACCCAGGTGGCGAAGATCCCGTGCCACCAAAAAACTTT
GACAACAGAGAACACTAACA

Downstream 100 bases:

>100_bases
CAGCGCATGCCCGGCCAGATAGCCACGCTGATAAGGCGGTCATCAATATGACCGCCTTTATTTTTTACAACCGCGCCCCG
CGGCGCAAAGCGAGCGTTTC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVPASGQGQLITVKTDVLSLKINTRGGDIE
QAFLLSYPDKLGSPQPFHLLETSPEFVYQAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVV
YTKAFILKRGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDDKYQKYSFKDIKG
ENLSVSTEGGWVAMLQQYFATAWVPFTPGKNTFYTSDLGNGLAAVGFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAIA
PHLDLAVDYGWLWFISQPLFKLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDK
QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSAQDPYYILPLLMGITMFFIQKM
SPTTVTDLMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKKAK

Sequences:

>Translated_547_residues
MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVPASGQGQLITVKTDVLSLKINTRGGDIE
QAFLLSYPDKLGSPQPFHLLETSPEFVYQAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVV
YTKAFILKRGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDDKYQKYSFKDIKG
ENLSVSTEGGWVAMLQQYFATAWVPFTPGKNTFYTSDLGNGLAAVGFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAIA
PHLDLAVDYGWLWFISQPLFKLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDK
QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSAQDPYYILPLLMGITMFFIQKM
SPTTVTDLMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKKAK
>Mature_547_residues
MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVPASGQGQLITVKTDVLSLKINTRGGDIE
QAFLLSYPDKLGSPQPFHLLETSPEFVYQAQSGLTGKNGPDNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVV
YTKAFILKRGDFALNVNYDINNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDDKYQKYSFKDIKG
ENLSVSTEGGWVAMLQQYFATAWVPFTPGKNTFYTSDLGNGLAAVGFKSAPVTVAAGGQSELKATLWLGPEIQDKMAAIA
PHLDLAVDYGWLWFISQPLFKLLKFIHSYIGNWGFSIIIITFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDK
QRQSQEMMALYKAEKVNPLGGCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSAQDPYYILPLLMGITMFFIQKM
SPTTVTDLMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSRDKKAK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=546, Percent_Identity=77.2893772893773, Blast_Score=868, Evalue=0.0,
Organism=Drosophila melanogaster, GI24662345, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356443, Length=207, Percent_Identity=28.0193236714976, Blast_Score=78, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 61232; Mature: 61232

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: PS00496 PII_GLNB_UMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVPASGQGQL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCE
ITVKTDVLSLKINTRGGDIEQAFLLSYPDKLGSPQPFHLLETSPEFVYQAQSGLTGKNGP
EEEEEEEEEEEEECCCCCCHHHHHEECCHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCC
DNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVVYTKAFILKRGDFALNVNYDI
CCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEC
NNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDDKYQKYSFKDIKG
CCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHCCCCCCCC
ENLSVSTEGGWVAMLQQYFATAWVPFTPGKNTFYTSDLGNGLAAVGFKSAPVTVAAGGQS
CCEEEECCCCHHHHHHHHHHHEEEEECCCCCCEEECCCCCCEEECCCCCCCEEEEECCHH
ELKATLWLGPEIQDKMAAIAPHLDLAVDYGWLWFISQPLFKLLKFIHSYIGNWGFSIIII
HCEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDKQRQSQEMMALYKAEKVNPLG
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
GCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSAQDPYYILPLLMGITMFFIQKM
HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
SPTTVTDLMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRDKKAK
CCCCCCC
>Mature Secondary Structure
MDSQRNLLVIALLFVSFMIWQAWQTDHAPTPTAQTTQQTANTTAADPNSQGVPASGQGQL
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCE
ITVKTDVLSLKINTRGGDIEQAFLLSYPDKLGSPQPFHLLETSPEFVYQAQSGLTGKNGP
EEEEEEEEEEEEECCCCCCHHHHHEECCHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCC
DNPANGERPLFTTNQDTYVLADNQSELRVPLTYTTPDGVVYTKAFILKRGDFALNVNYDI
CCCCCCCCCEEECCCCEEEEECCCCCEEEEEEEECCCCEEEEEEEEEECCCEEEEEEEEC
NNASAQPLELTLFGQLKQSIDLPKARNTDSSNFALHTYRGAAYSTTDDKYQKYSFKDIKG
CCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCEEEEEECCCEECCCCHHHHHCCCCCCCC
ENLSVSTEGGWVAMLQQYFATAWVPFTPGKNTFYTSDLGNGLAAVGFKSAPVTVAAGGQS
CCEEEECCCCHHHHHHHHHHHEEEEECCCCCCEEECCCCCCEEECCCCCCCEEEEECCHH
ELKATLWLGPEIQDKMAAIAPHLDLAVDYGWLWFISQPLFKLLKFIHSYIGNWGFSIIII
HCEEEEEECCCHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TFIVRGIMYPLTKAQYTSMAKMRMLQPKLAAMRERLGDDKQRQSQEMMALYKAEKVNPLG
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
GCLPLVIQMPIFLALYYMLSGSIELRHAPFALWIHDLSAQDPYYILPLLMGITMFFIQKM
HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
SPTTVTDLMQQKIMTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SRDKKAK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA