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The map label for this gene is 85060340

Identifier: 85060340

GI number: 85060340

Start: 4054746

End: 4055792

Strand: Reverse

Name: 85060340

Synonym: SG2362

Alternate gene names: NA

Gene position: 4055792-4054746 (Counterclockwise)

Preceding gene: 85060341

Following gene: 85060339

Centisome position: 97.23

GC content: 57.59

Gene sequence:

>1047_bases
TTGCTCTCACTGTGGCGCAGGGAAGGGGCTGGATTTGGTGATGAAGGTCAAGCAATACACTGCACCCGCGGCTGCCACGG
TACGCCCGAAAGCTGGCGGGATAACGTGGCCCGTCTGGTCGAGGGGAATCCGTCAATGATGACGGCGGTTGCAGCAGTAT
TGGCCGCGCCATTGATTGGTCTGGCGGAGAATGACGGCTTCGGCATTCACTTCTTTGAGCAATCGAGCTCAGGGAAGACA
ACCACCGCCAATGTTGCCAGTAGCTTGTATGGCAATCCTGATGCCCTACGTCTGACCTGGTACGGGACCGCGCTGGGATT
GGCCAATGAAGCCTCCGCCCACAATGACGCGCTGATGCCACTGGATGAAGTGGGGCAGGGGGCAGACCCGCACAGCGTCT
CGCAGTCCACCTACGCGCTGTTTAACGGCGTAGGGAAGCTACAGGGGGCGAAAGAAGGCGGTAACCGCGACTTGAAGCGC
TGGCGCACCATTGCCATCAGCACCGGTGAGATGGATATGGAGATTTTTATCGCTACCTCCGGGCGTAAGGTCAAGGCAGG
ACAGCTGGTACGCCTGCTGAATATCCCGCTGTGCAAGGCAGTATGTTTCCATGAGCACGCTAACGGTAAGCAACATGCCG
ATGCCCTGAAGGCGGCCTATCAGCAACACTACGGTGCTGCGGGCCGTGCATGGGTGAAATACCTCGCCGACCACCAACAA
GACGCGGTAGCGGCAGTAAGGACGGCTGAAGCTAGCTGGCGCAGTCTGATACCCGCCAACTATGGTGAGCAGGTACACCG
GGTAGCGGCACTGGAAGCAGCGTTATTGCTGGGACGGATCATGACGGGCTGGGATGAGCAGGGGTGTCGAGATGCCATTC
AGCACAGCTACAATGCATGGGTGAATCTGTTTGGCACTGGCAACAAGGAGTACGAGCAGATCATTGAGCAAGCCGAGGCG
TTTCTGAGTGCATACGGCATTAGCCGCTTTGCGCCACTGGATTATAACGAGAAGTATACCCAATCTTGCCGGATACCGCG
TCTGTAA

Upstream 100 bases:

>100_bases
GTACACGATATTCGACACAAAGCGTTAGTCGATGAAGTCCGCGCTGCGTGGGTAAGACTCGCTACCGCTTCGACGATTTA
GAGGGCCGCGGCACTCACTA

Downstream 100 bases:

>100_bases
GCACTATGGTGACCCGGTGATGTTCTACGTGCTGCCCAAGCCCTTCAAAGAAGAGATGGCGAAGGGTTTTGATTCGACAC
AGTTTGCCAGGACGCTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Prophage Primase; Superfamily II Helicase; DNA/RNA Helicase; DNA Helicase Inner Membrane Protein; Conserved Domain Protein; Inner Membrane; Zinc Finger CHC2-Family Protein; Primase C 2 Family; Bifunctional DNA Primase/Polymerase; Bacteriophage Protein; Inner Membrane Protein Phage Origin; DNA Primase TraC

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MLSLWRREGAGFGDEGQAIHCTRGCHGTPESWRDNVARLVEGNPSMMTAVAAVLAAPLIGLAENDGFGIHFFEQSSSGKT
TTANVASSLYGNPDALRLTWYGTALGLANEASAHNDALMPLDEVGQGADPHSVSQSTYALFNGVGKLQGAKEGGNRDLKR
WRTIAISTGEMDMEIFIATSGRKVKAGQLVRLLNIPLCKAVCFHEHANGKQHADALKAAYQQHYGAAGRAWVKYLADHQQ
DAVAAVRTAEASWRSLIPANYGEQVHRVAALEAALLLGRIMTGWDEQGCRDAIQHSYNAWVNLFGTGNKEYEQIIEQAEA
FLSAYGISRFAPLDYNEKYTQSCRIPRL

Sequences:

>Translated_348_residues
MLSLWRREGAGFGDEGQAIHCTRGCHGTPESWRDNVARLVEGNPSMMTAVAAVLAAPLIGLAENDGFGIHFFEQSSSGKT
TTANVASSLYGNPDALRLTWYGTALGLANEASAHNDALMPLDEVGQGADPHSVSQSTYALFNGVGKLQGAKEGGNRDLKR
WRTIAISTGEMDMEIFIATSGRKVKAGQLVRLLNIPLCKAVCFHEHANGKQHADALKAAYQQHYGAAGRAWVKYLADHQQ
DAVAAVRTAEASWRSLIPANYGEQVHRVAALEAALLLGRIMTGWDEQGCRDAIQHSYNAWVNLFGTGNKEYEQIIEQAEA
FLSAYGISRFAPLDYNEKYTQSCRIPRL
>Mature_348_residues
MLSLWRREGAGFGDEGQAIHCTRGCHGTPESWRDNVARLVEGNPSMMTAVAAVLAAPLIGLAENDGFGIHFFEQSSSGKT
TTANVASSLYGNPDALRLTWYGTALGLANEASAHNDALMPLDEVGQGADPHSVSQSTYALFNGVGKLQGAKEGGNRDLKR
WRTIAISTGEMDMEIFIATSGRKVKAGQLVRLLNIPLCKAVCFHEHANGKQHADALKAAYQQHYGAAGRAWVKYLADHQQ
DAVAAVRTAEASWRSLIPANYGEQVHRVAALEAALLLGRIMTGWDEQGCRDAIQHSYNAWVNLFGTGNKEYEQIIEQAEA
FLSAYGISRFAPLDYNEKYTQSCRIPRL

Specific function: Unknown

COG id: COG5519

COG function: function code L; Superfamily II helicase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37868; Mature: 37868

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLWRREGAGFGDEGQAIHCTRGCHGTPESWRDNVARLVEGNPSMMTAVAAVLAAPLIG
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHE
LAENDGFGIHFFEQSSSGKTTTANVASSLYGNPDALRLTWYGTALGLANEASAHNDALMP
EECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCC
LDEVGQGADPHSVSQSTYALFNGVGKLQGAKEGGNRDLKRWRTIAISTGEMDMEIFIATS
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCEEEEEEEEEC
GRKVKAGQLVRLLNIPLCKAVCFHEHANGKQHADALKAAYQQHYGAAGRAWVKYLADHQQ
CCEECHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
DAVAAVRTAEASWRSLIPANYGEQVHRVAALEAALLLGRIMTGWDEQGCRDAIQHSYNAW
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHE
VNLFGTGNKEYEQIIEQAEAFLSAYGISRFAPLDYNEKYTQSCRIPRL
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MLSLWRREGAGFGDEGQAIHCTRGCHGTPESWRDNVARLVEGNPSMMTAVAAVLAAPLIG
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHE
LAENDGFGIHFFEQSSSGKTTTANVASSLYGNPDALRLTWYGTALGLANEASAHNDALMP
EECCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEEEEHHHCCCCCCCCCCCCCCC
LDEVGQGADPHSVSQSTYALFNGVGKLQGAKEGGNRDLKRWRTIAISTGEMDMEIFIATS
HHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEEEECCCEEEEEEEEEC
GRKVKAGQLVRLLNIPLCKAVCFHEHANGKQHADALKAAYQQHYGAAGRAWVKYLADHQQ
CCEECHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHH
DAVAAVRTAEASWRSLIPANYGEQVHRVAALEAALLLGRIMTGWDEQGCRDAIQHSYNAW
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHE
VNLFGTGNKEYEQIIEQAEAFLSAYGISRFAPLDYNEKYTQSCRIPRL
EEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA