| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
Click here to switch to the map view.
The map label for this gene is 85060333
Identifier: 85060333
GI number: 85060333
Start: 4042865
End: 4043269
Strand: Reverse
Name: 85060333
Synonym: SG2355
Alternate gene names: NA
Gene position: 4043269-4042865 (Counterclockwise)
Preceding gene: 85060334
Following gene: 85060331
Centisome position: 96.93
GC content: 45.43
Gene sequence:
>405_bases ATGAAACTTCATCACACAGAAATTATCACAACGTATCGCTATCCAGATTGCGGAGAGATGAATCATCGCATTACTGTGCG TCGCCGCACTGATGTTCCGGGAACGGGGGCCGGATTAGAGCCAACATTTACCGAAACCTTTAAAGCATGGGCAAAAATAG CGCAAGTGAGTGCGACGGCCTACCAAAACTCAATGCAAATTAACCATACCATCACCCACAGGATCACACTGGACTATCGT CGCGGGCGAACGATTACGACAGATCATGAGGTTGTCTTTGGCGATACCGTTTTTAAAGTGAAACGCATTATCGATATCAA TCATACACAACGTTTCTGGGTGCTGGAATGTGAGGCATTAGGAAGCACATCGTCGGAGAATTATCTTTATGCACTTGCAT ATTGA
Upstream 100 bases:
>100_bases CTCACTATTATTTAAATCGGACGGCCTCATCCGATTTTGAAAAAAGCGATTTGCCAATGGGGTTTATCTGGAATGTACAA CCGTACCGAATAATACCGCT
Downstream 100 bases:
>100_bases CTTTCAACAACCGAAAGAACTCGTCTTTAACCGCGCACGATTGAGGCGGGGATTTGCCGAGATAGGCAAGGCACACGTCG CGGTGACTCGACGGTTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKLHHTEIITTYRYPDCGEMNHRITVRRRTDVPGTGAGLEPTFTETFKAWAKIAQVSATAYQNSMQINHTITHRITLDYR RGRTITTDHEVVFGDTVFKVKRIIDINHTQRFWVLECEALGSTSSENYLYALAY
Sequences:
>Translated_134_residues MKLHHTEIITTYRYPDCGEMNHRITVRRRTDVPGTGAGLEPTFTETFKAWAKIAQVSATAYQNSMQINHTITHRITLDYR RGRTITTDHEVVFGDTVFKVKRIIDINHTQRFWVLECEALGSTSSENYLYALAY >Mature_134_residues MKLHHTEIITTYRYPDCGEMNHRITVRRRTDVPGTGAGLEPTFTETFKAWAKIAQVSATAYQNSMQINHTITHRITLDYR RGRTITTDHEVVFGDTVFKVKRIIDINHTQRFWVLECEALGSTSSENYLYALAY
Specific function: Unknown
COG id: COG5614
COG function: function code R; Bacteriophage head-tail adaptor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15511; Mature: 15511
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLHHTEIITTYRYPDCGEMNHRITVRRRTDVPGTGAGLEPTFTETFKAWAKIAQVSATA CCEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQNSMQINHTITHRITLDYRRGRTITTDHEVVFGDTVFKVKRIIDINHTQRFWVLECEAL HCCCEEEEEEEEEEEEEEECCCCEECCCCEEEECCHHEEEEEEEECCCCCEEEEEEEEEC GSTSSENYLYALAY CCCCCCCEEEEEEC >Mature Secondary Structure MKLHHTEIITTYRYPDCGEMNHRITVRRRTDVPGTGAGLEPTFTETFKAWAKIAQVSATA CCEECCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YQNSMQINHTITHRITLDYRRGRTITTDHEVVFGDTVFKVKRIIDINHTQRFWVLECEAL HCCCEEEEEEEEEEEEEEECCCCEECCCCEEEECCHHEEEEEEEECCCCCEEEEEEEEEC GSTSSENYLYALAY CCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA