Click here to switch to the map view.

The map label for this gene is 85060330

Identifier: 85060330

GI number: 85060330

Start: 4034777

End: 4035328

Strand: Reverse

Name: 85060330

Synonym: SG2352

Alternate gene names: NA

Gene position: 4035328-4034777 (Counterclockwise)

Preceding gene: 85060331

Following gene: 85060329

Centisome position: 96.74

GC content: 49.46

Gene sequence:

>552_bases
ATGAGTGAAACAATGCAAAATATTTTTTCTCGTTTGCAGCGAAACCTTGCGCGCCTCTGGTCGCGAGCGGTAATACAACG
TCTGAATAACACGACCGCTTGCCAACAGGTTGATATATCCATAATGGCGGGCGAAACGAAAGACGGTATGGAATACCTCG
AGCCTTATGGCTTTACCTCGACCGCGCATTCTGGCGCAGAAGGTGTCGCGCTATTCGTTTCCGGTGACCGTTCTCACGGC
ATTGTGATTAACGTCGATGACCGTCGCTATCGGCTTAAGGGGCTGAAAGAAGGCGAGGTGGCTATCTATACCGATGAAGG
CGATAGCATCTTGCTCAAACGCGGACGGTTGATAGAGGCGACGACGGAGACGTTCATCCTGAATGCTAAAAACAAGGTGG
TACTTAATACCGCATTAATTGAAACATCCAGTGCAATCAAGGCGGAGAAATCGATCACATCTGCCGCAGAGGTACAAGAT
AAAGTGGGTTCATTAAGTACGATGAGGAAACAGTACAACAGCCAGCTCACTCGGGCGATAGCGACGGCATGA

Upstream 100 bases:

>100_bases
TATATTCCGCCGCTTGAAGCGTTAAAGGAAAAAGAGACAGACAATATCGGCGATCTATAGAAATTTTAAAATATTCTTTT
TTCTTCAGTTTAACCTATTA

Downstream 100 bases:

>100_bases
CCGGAACACCCACTCAAGGTATGAAATAAAATGACAGGCATTCCCATTCAACATGATGACCGATTAAGCCGTGCCGTGAT
TGTCTCGCTATTCACCTGGC

Product: phage assembly protein

Products: NA

Alternate protein names: Bacteriophage Mu; Baseplate Assembly Protein; Phage Assembly Protein; Phage Baseplate Assembly Protein; Bacteriophage Base Plate Protein; Phage Base Plate Protein; Mu Bacteriophage Baseplate Assembly Protein Gp; Prophage MuSo2 Baseplate Assembly Protein V; Baseplate Assembly Phage Protein; Mu-Like Phage Assembly Protein Gp; Baseplate Assembly Protein V; Mu-Like Prophage Protein Gp; Phage-Related Baseplate Assembly Protein V

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MSETMQNIFSRLQRNLARLWSRAVIQRLNNTTACQQVDISIMAGETKDGMEYLEPYGFTSTAHSGAEGVALFVSGDRSHG
IVINVDDRRYRLKGLKEGEVAIYTDEGDSILLKRGRLIEATTETFILNAKNKVVLNTALIETSSAIKAEKSITSAAEVQD
KVGSLSTMRKQYNSQLTRAIATA

Sequences:

>Translated_183_residues
MSETMQNIFSRLQRNLARLWSRAVIQRLNNTTACQQVDISIMAGETKDGMEYLEPYGFTSTAHSGAEGVALFVSGDRSHG
IVINVDDRRYRLKGLKEGEVAIYTDEGDSILLKRGRLIEATTETFILNAKNKVVLNTALIETSSAIKAEKSITSAAEVQD
KVGSLSTMRKQYNSQLTRAIATA
>Mature_182_residues
SETMQNIFSRLQRNLARLWSRAVIQRLNNTTACQQVDISIMAGETKDGMEYLEPYGFTSTAHSGAEGVALFVSGDRSHGI
VINVDDRRYRLKGLKEGEVAIYTDEGDSILLKRGRLIEATTETFILNAKNKVVLNTALIETSSAIKAEKSITSAAEVQDK
VGSLSTMRKQYNSQLTRAIATA

Specific function: Unknown

COG id: COG4384

COG function: function code S; Mu-like prophage protein gp45

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20163; Mature: 20032

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETMQNIFSRLQRNLARLWSRAVIQRLNNTTACQQVDISIMAGETKDGMEYLEPYGFTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCHHHHCCCCCCC
TAHSGAEGVALFVSGDRSHGIVINVDDRRYRLKGLKEGEVAIYTDEGDSILLKRGRLIEA
CCCCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCEEEEECCCCEEEEECCCEEEE
TTETFILNAKNKVVLNTALIETSSAIKAEKSITSAAEVQDKVGSLSTMRKQYNSQLTRAI
CCCEEEEECCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATA
HCC
>Mature Secondary Structure 
SETMQNIFSRLQRNLARLWSRAVIQRLNNTTACQQVDISIMAGETKDGMEYLEPYGFTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEEEEEECCCCCCHHHHCCCCCCC
TAHSGAEGVALFVSGDRSHGIVINVDDRRYRLKGLKEGEVAIYTDEGDSILLKRGRLIEA
CCCCCCCCEEEEEECCCCCCEEEEECCCEEEECCCCCCCEEEEECCCCEEEEECCCEEEE
TTETFILNAKNKVVLNTALIETSSAIKAEKSITSAAEVQDKVGSLSTMRKQYNSQLTRAI
CCCEEEEECCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATA
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA