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The map label for this gene is yfdK [H]

Identifier: 85060328

GI number: 85060328

Start: 4031669

End: 4032190

Strand: Reverse

Name: yfdK [H]

Synonym: SG2350

Alternate gene names: 85060328

Gene position: 4032190-4031669 (Counterclockwise)

Preceding gene: 85060329

Following gene: 85060325

Centisome position: 96.67

GC content: 54.02

Gene sequence:

>522_bases
ATGTTTCGGGTAATGATGATGAACAATGAAAGATATGTATTTAGCGGCACGACCGGCGCATTTTATCCGCTCAGCCGCAA
ACAAGGTTATGTCGATGCCGGCTCGTGGCCTGATGATGGCGTGGAGGTGAAAGAAGATATTTTCATGAAATTTCAAAATC
CGCCGCCCGGAAAGCTGCGTGGTGGCGACGCCAACGGCTACCCGTGTTGGGTCGATACACCGCCGCCCACGTTGGAAGAT
GAAAGGCGAAGCGCAGCGCTCACGAAAAAGAGCCAGCTGGATGAGGCCGGACGCATTATTGGGCCGCTTCAGGATGCGGT
AGACCTCGGCATGACGACGAACACCGAAAAAGCGTCATTGCTGACGTGGAAGAAATACCGCATGCTGCTTAACCGTGTCG
ATATTAGCACAGCGCCAGATAAACTGGCCGACGCCGCCCAACGCGGAAAAGGTGGGGGATTAATGCCCGTCATCGAACAA
GGGAAGCCAGCTCATCATCGGAAAGGCCCGTCGACATTTTGA

Upstream 100 bases:

>100_bases
CGCTTTCCTACGGATTTGGTGAATACACCCAATCCACCATGAAAGTCTGGTCAAATAACAATGCTGGTTCAGGTTTTCGT
TATGTGGCCATAGGCTATTA

Downstream 100 bases:

>100_bases
CGATAGCGCGATCGACGCCGTTGGCGATAAGTTGCCTTGCAATTTTCAGCGAGGCGCTATGCTCGCCTTCTTGGCGTGAT
TGTTCTGCAATAGTCATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MFRVMMMNNERYVFSGTTGAFYPLSRKQGYVDAGSWPDDGVEVKEDIFMKFQNPPPGKLRGGDANGYPCWVDTPPPTLED
ERRSAALTKKSQLDEAGRIIGPLQDAVDLGMTTNTEKASLLTWKKYRMLLNRVDISTAPDKLADAAQRGKGGGLMPVIEQ
GKPAHHRKGPSTF

Sequences:

>Translated_173_residues
MFRVMMMNNERYVFSGTTGAFYPLSRKQGYVDAGSWPDDGVEVKEDIFMKFQNPPPGKLRGGDANGYPCWVDTPPPTLED
ERRSAALTKKSQLDEAGRIIGPLQDAVDLGMTTNTEKASLLTWKKYRMLLNRVDISTAPDKLADAAQRGKGGGLMPVIEQ
GKPAHHRKGPSTF
>Mature_173_residues
MFRVMMMNNERYVFSGTTGAFYPLSRKQGYVDAGSWPDDGVEVKEDIFMKFQNPPPGKLRGGDANGYPCWVDTPPPTLED
ERRSAALTKKSQLDEAGRIIGPLQDAVDLGMTTNTEKASLLTWKKYRMLLNRVDISTAPDKLADAAQRGKGGGLMPVIEQ
GKPAHHRKGPSTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ymfS [H]

Homologues:

Organism=Escherichia coli, GI1788696, Length=133, Percent_Identity=40.6015037593985, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 19118; Mature: 19118

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRVMMMNNERYVFSGTTGAFYPLSRKQGYVDAGSWPDDGVEVKEDIFMKFQNPPPGKLR
CEEEEEECCCEEEEECCCCCEEECCCCCCCEECCCCCCCCCEECCCEEEEECCCCCCCCC
GGDANGYPCWVDTPPPTLEDERRSAALTKKSQLDEAGRIIGPLQDAVDLGMTTNTEKASL
CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHH
LTWKKYRMLLNRVDISTAPDKLADAAQRGKGGGLMPVIEQGKPAHHRKGPSTF
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRVMMMNNERYVFSGTTGAFYPLSRKQGYVDAGSWPDDGVEVKEDIFMKFQNPPPGKLR
CEEEEEECCCEEEEECCCCCEEECCCCCCCEECCCCCCCCCEECCCEEEEECCCCCCCCC
GGDANGYPCWVDTPPPTLEDERRSAALTKKSQLDEAGRIIGPLQDAVDLGMTTNTEKASL
CCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHH
LTWKKYRMLLNRVDISTAPDKLADAAQRGKGGGLMPVIEQGKPAHHRKGPSTF
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]