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The map label for this gene is rdoA [H]

Identifier: 85060215

GI number: 85060215

Start: 3893655

End: 3894638

Strand: Reverse

Name: rdoA [H]

Synonym: SG2237

Alternate gene names: 85060215

Gene position: 3894638-3893655 (Counterclockwise)

Preceding gene: 85060216

Following gene: 85060214

Centisome position: 93.37

GC content: 53.56

Gene sequence:

>984_bases
ATGAGCACAGGATTTAATTTCCAGGCATTAATGCCCGATTTGATCATGGACGCCCTGCAACAGACGGGGATCGTCGTCGA
TTCTGGTTCGACCGCTCTAAACAGCTACGAAAATCGCGTCTATCAGTTTCTGGACGAAGAGAAAAAGCGCTATGTGGTGA
AATTTTATCGTCCTGAGCGCTGGAGTGCCGAGCAAATTCTGGAAGAGCACCAGCTGGCGCATGAGCTCGCGGCAGCCGAA
ATACCTGTGGTGGCGCCGCTTGTGATTCATAATGCGACGCTGCACCACTATCTTGGCTATTATTTTGCCCTGTTTCCCAG
CGTGGGTGGCCGGGCTTTCGAGCAAGATAACGATGACCAGCTGGAATGGGTAGGGCGCTTTCTTGGCCGTATTCACCGAC
ACAATGGCAGTCGCTGCTTTAGCGCGCGACCCACCATGGGACTGGAAGAATATCTGACGCATCCGCGTCGCGAGCTGGAA
AATAGCACTCTGATTGCTGGCCGGCAGAAAGCAATGTTTTTACAGGCCTGTGACCAACTGATAGCGCAGGTGCATGCGGT
ATGGAACACCGATTGGCGTCCGCTCCGTCTGCATGGCGATCTGCACGCCGGAAATATCTTGTGGCGCGACGGTCCGACAT
TTGTTGATCTGGACGATGCCCGCAATGGTCCAGCCATCCAGGATCTTTGGATGCTGCTTAATGGCGATCGCCGCGACAGA
CTTTATCAGCTGTCGCTGCTGTTGGATGCATATACTGAATTCATAGACTTCGATTCCCGTGAACTGGCGCTGATTGAGCC
GCTACGGGCAATGAGGATGATCCACTATCTCGCCTGGGTTAGCCGGCGTTGGGATGACCCGTCTTTTCCGCGTAGTTTTC
CGTGGATGATTGAGGGGGAATTCTGGTCGCAACAAACGGCGCTATTTATTGAACAGGCAACGCTGCTGCAACAGCCGCCG
TTGCAGCTGATGCCGGTATATTAA

Upstream 100 bases:

>100_bases
TTGCGTGCCCGCGGAATTATCAAGGAGTAAGCGGGGCTAATGAACTCTTTTACTAGAGCGTCCATTTTTTTCACACGATG
GCATATCGCGGCGGCGGATT

Downstream 100 bases:

>100_bases
ACGTTTTATCGCCGATGTTATTCATTTTGGAGAGACACTATTTATGAAAAAAATATGGTTTGCGTTGGTGGTTATCGCGT
TGGCGTTCAGCGCCTCGGCC

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSTGFNFQALMPDLIMDALQQTGIVVDSGSTALNSYENRVYQFLDEEKKRYVVKFYRPERWSAEQILEEHQLAHELAAAE
IPVVAPLVIHNATLHHYLGYYFALFPSVGGRAFEQDNDDQLEWVGRFLGRIHRHNGSRCFSARPTMGLEEYLTHPRRELE
NSTLIAGRQKAMFLQACDQLIAQVHAVWNTDWRPLRLHGDLHAGNILWRDGPTFVDLDDARNGPAIQDLWMLLNGDRRDR
LYQLSLLLDAYTEFIDFDSRELALIEPLRAMRMIHYLAWVSRRWDDPSFPRSFPWMIEGEFWSQQTALFIEQATLLQQPP
LQLMPVY

Sequences:

>Translated_327_residues
MSTGFNFQALMPDLIMDALQQTGIVVDSGSTALNSYENRVYQFLDEEKKRYVVKFYRPERWSAEQILEEHQLAHELAAAE
IPVVAPLVIHNATLHHYLGYYFALFPSVGGRAFEQDNDDQLEWVGRFLGRIHRHNGSRCFSARPTMGLEEYLTHPRRELE
NSTLIAGRQKAMFLQACDQLIAQVHAVWNTDWRPLRLHGDLHAGNILWRDGPTFVDLDDARNGPAIQDLWMLLNGDRRDR
LYQLSLLLDAYTEFIDFDSRELALIEPLRAMRMIHYLAWVSRRWDDPSFPRSFPWMIEGEFWSQQTALFIEQATLLQQPP
LQLMPVY
>Mature_326_residues
STGFNFQALMPDLIMDALQQTGIVVDSGSTALNSYENRVYQFLDEEKKRYVVKFYRPERWSAEQILEEHQLAHELAAAEI
PVVAPLVIHNATLHHYLGYYFALFPSVGGRAFEQDNDDQLEWVGRFLGRIHRHNGSRCFSARPTMGLEEYLTHPRRELEN
STLIAGRQKAMFLQACDQLIAQVHAVWNTDWRPLRLHGDLHAGNILWRDGPTFVDLDDARNGPAIQDLWMLLNGDRRDRL
YQLSLLLDAYTEFIDFDSRELALIEPLRAMRMIHYLAWVSRRWDDPSFPRSFPWMIEGEFWSQQTALFIEQATLLQQPPL
QLMPVY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=326, Percent_Identity=61.6564417177914, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38136; Mature: 38005

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGFNFQALMPDLIMDALQQTGIVVDSGSTALNSYENRVYQFLDEEKKRYVVKFYRPER
CCCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
WSAEQILEEHQLAHELAAAEIPVVAPLVIHNATLHHYLGYYFALFPSVGGRAFEQDNDDQ
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
LEWVGRFLGRIHRHNGSRCFSARPTMGLEEYLTHPRRELENSTLIAGRQKAMFLQACDQL
HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCHHHHHCCCCEECCHHHHHHHHHHHHH
IAQVHAVWNTDWRPLRLHGDLHAGNILWRDGPTFVDLDDARNGPAIQDLWMLLNGDRRDR
HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCHHH
LYQLSLLLDAYTEFIDFDSRELALIEPLRAMRMIHYLAWVSRRWDDPSFPRSFPWMIEGE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
FWSQQTALFIEQATLLQQPPLQLMPVY
HHCCHHHHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure 
STGFNFQALMPDLIMDALQQTGIVVDSGSTALNSYENRVYQFLDEEKKRYVVKFYRPER
CCCCCHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
WSAEQILEEHQLAHELAAAEIPVVAPLVIHNATLHHYLGYYFALFPSVGGRAFEQDNDDQ
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
LEWVGRFLGRIHRHNGSRCFSARPTMGLEEYLTHPRRELENSTLIAGRQKAMFLQACDQL
HHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHCCHHHHHCCCCEECCHHHHHHHHHHHHH
IAQVHAVWNTDWRPLRLHGDLHAGNILWRDGPTFVDLDDARNGPAIQDLWMLLNGDRRDR
HHHHHHHHCCCCCEEEEECCCCCCCEEECCCCCEEECCCCCCCCHHHHHHHHHCCCCHHH
LYQLSLLLDAYTEFIDFDSRELALIEPLRAMRMIHYLAWVSRRWDDPSFPRSFPWMIEGE
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
FWSQQTALFIEQATLLQQPPLQLMPVY
HHCCHHHHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]