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The map label for this gene is spaQ [H]

Identifier: 85060061

GI number: 85060061

Start: 3589358

End: 3589618

Strand: Reverse

Name: spaQ [H]

Synonym: SG2083

Alternate gene names: 85060061

Gene position: 3589618-3589358 (Counterclockwise)

Preceding gene: 85060062

Following gene: 85060060

Centisome position: 86.06

GC content: 51.72

Gene sequence:

>261_bases
ATGAACAATTTGTTATTTGCCGGCAATAAAGCCCTGTATCTGGTACTGATGATGGCAGCGGGGCCTATTATTGTGGCGAC
GCTGGTGGGATTGCTGGTGGGGCTGTTTCAGACCGTGCTGCAACTGCAGGAGCAAACCCTGCCTTTCGGTATTAAACTGC
TAAGTGTCACCCTGTGTCTGTTTCTGCTCTCGGGTTGGTATGGCGAAACGCTGCTGCAGTTTAGCCATGAAGTCATAAGG
ATGGCGTTAGGCCGCTCCTGA

Upstream 100 bases:

>100_bases
TGTTGTTCGTCATGCTCGACGGTTGGACGCTGCTATCGCAAGGGCTGGTTCTGCAATATCTCGATATGGGTGCCGGCGCG
GAGATTGCGGGGGGCCCGGG

Downstream 100 bases:

>100_bases
CCGATGATCTTGCCACTGTGGTCTTCCCTGTTTGAATGGCTGATTACCCTAGCGGTCGTGTCGGCGCGCATTACGCCGGC
GTTTTTCCTGTTGCCGTTTT

Product: type III secretion apparatus SpaQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MNNLLFAGNKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKLLSVTLCLFLLSGWYGETLLQFSHEVIR
MALGRS

Sequences:

>Translated_86_residues
MNNLLFAGNKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKLLSVTLCLFLLSGWYGETLLQFSHEVIR
MALGRS
>Mature_86_residues
MNNLLFAGNKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKLLSVTLCLFLLSGWYGETLLQFSHEVIR
MALGRS

Specific function: Involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells [H]

COG id: COG4794

COG function: function code U; Type III secretory pathway, component EscS

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006306 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9425; Mature: 9425

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLLFAGNKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKLLSVTLCL
CCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FLLSGWYGETLLQFSHEVIRMALGRS
HHHHCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNNLLFAGNKALYLVLMMAAGPIIVATLVGLLVGLFQTVLQLQEQTLPFGIKLLSVTLCL
CCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FLLSGWYGETLLQFSHEVIRMALGRS
HHHHCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7638176 [H]