| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is pgk
Identifier: 85059993
GI number: 85059993
Start: 3473274
End: 3474437
Strand: Reverse
Name: pgk
Synonym: SG2015
Alternate gene names: 85059993
Gene position: 3474437-3473274 (Counterclockwise)
Preceding gene: 85059995
Following gene: 85059992
Centisome position: 83.3
GC content: 55.84
Gene sequence:
>1164_bases ATGGCTGTAATTAAGATGACCGATCTGGATCTGGCTGGTAAACGTGTATTTATCCGTTCCGATCTGAACGTGCCGGTTAA AGACGGGAAAGTAACGTCCGATGCGCGTATCCGCGCCTCTCTACCTACTATCGAAGACTCACTGAAACAGGGCGCGCGCG TCATGGTGACCTCCCATCTCGGCCGCCCGACTGAAGGGGAATATAACGCCGAGTTTTCGCTGCAGCCGGTGGTGGATTAT CTCGAAAATAAACTCTCCGCGCCGGTGCGTCTGGCCAAAGATTACCTTGATGGCGTAGATGTCGCCGAGGGCGAACTGGT CGTGCTGGAAAACGTGCGCTTCAACAAGGGCGAAAAGAAAGATGACGAAGCCCTGGCGAAGAAATATGCCGCGCTGTGCG ACGTGTTCGTCATGGATGCCTTCGGTACCGCCCACCGCGCTCAGGCCTCCACCCACGGCGTAGGTAAATTCGCGGCCGTC GCTTGCGCCGGCCCGCTGCTATTCAATGAGCTGGAAGCGCTGGGCAAAGCGCTTGATAACCCGGCCCGGCCGATGGTGGC CATCGTTGGCGGTTCAAAAGTCTCCACCAAGCTGACTGTATTGGATTCACTGTCGAAAATTGCCGATCAGCTCATCGTCG GCGGCGGCATCGCCAACACCTTCGTTGCGGCGCAGGGGCATAACGTCGGTAAATCGCTCTACGAAGCCGACCTGATCTCG GAAGCCAAACGCCTGCTGGAAAGCAGCGATATTCCCGTACCGACCGATGTTCGCGTCGCTACCGAATTTTCTGAAACCGC GACCGCAACCTTGAAATCCACCAGCGAAATTCAAGACAGTGAACAGATTCTGGATTTGGGCGATGTTTCCGTCGCCCGTC TGGCGGAAATTCTGAAAAACGCCAAAACCATTTTGTGGAATGGTCCGGTCGGCGTGTTCGAGTTCGCCAATTTCCGTAAA GGCACCGAGGTGGTAGCCCGCGCTATCGCCGATAGCGAGGCATTCTCTATAGCCGGCGGCGGAGATACCCTGGCGGCCAT CGACCTGTTTGGCATTGCCGATCAAATCTCCTATATTTCCACTGGCGGCGGCGCTTTCCTTGAATTTGTCGAAGGCAAGA AACTTCCCGCGGTGGTCATGCTTGAAGAACGCGCGAAACAATAA
Upstream 100 bases:
>100_bases CATTGAATGGACGGGGTCACAAGCGACTATTGGTCCGGTGTGAGGAAGCCTTTCCCCGCCGCTCAGGCAATTTAGCAAGC ATCAAACAAGAGGGTTCACC
Downstream 100 bases:
>100_bases GTATTGAGCGGGCGCACGCCACCGGTGTTCGCCGCGGCTGGTACACAGGCTCGGGCCGCGGTGAGAAGTCACCCCTTTTA ATGGCCTACAAAACAGGACA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MAVIKMTDLDLAGKRVFIRSDLNVPVKDGKVTSDARIRASLPTIEDSLKQGARVMVTSHLGRPTEGEYNAEFSLQPVVDY LENKLSAPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKKDDEALAKKYAALCDVFVMDAFGTAHRAQASTHGVGKFAAV ACAGPLLFNELEALGKALDNPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLIS EAKRLLESSDIPVPTDVRVATEFSETATATLKSTSEIQDSEQILDLGDVSVARLAEILKNAKTILWNGPVGVFEFANFRK GTEVVARAIADSEAFSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEERAKQ
Sequences:
>Translated_387_residues MAVIKMTDLDLAGKRVFIRSDLNVPVKDGKVTSDARIRASLPTIEDSLKQGARVMVTSHLGRPTEGEYNAEFSLQPVVDY LENKLSAPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKKDDEALAKKYAALCDVFVMDAFGTAHRAQASTHGVGKFAAV ACAGPLLFNELEALGKALDNPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLIS EAKRLLESSDIPVPTDVRVATEFSETATATLKSTSEIQDSEQILDLGDVSVARLAEILKNAKTILWNGPVGVFEFANFRK GTEVVARAIADSEAFSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEERAKQ >Mature_386_residues AVIKMTDLDLAGKRVFIRSDLNVPVKDGKVTSDARIRASLPTIEDSLKQGARVMVTSHLGRPTEGEYNAEFSLQPVVDYL ENKLSAPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKKDDEALAKKYAALCDVFVMDAFGTAHRAQASTHGVGKFAAVA CAGPLLFNELEALGKALDNPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLISE AKRLLESSDIPVPTDVRVATEFSETATATLKSTSEIQDSEQILDLGDVSVARLAEILKNAKTILWNGPVGVFEFANFRKG TEVVARAIADSEAFSIAGGGDTLAAIDLFGIADQISYISTGGGAFLEFVEGKKLPAVVMLEERAKQ
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=410, Percent_Identity=36.5853658536585, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI31543397, Length=411, Percent_Identity=36.0097323600973, Blast_Score=226, Evalue=3e-59, Organism=Escherichia coli, GI1789294, Length=387, Percent_Identity=87.0801033591731, Blast_Score=683, Evalue=0.0, Organism=Caenorhabditis elegans, GI17508823, Length=403, Percent_Identity=41.6873449131514, Blast_Score=268, Evalue=4e-72, Organism=Saccharomyces cerevisiae, GI6319857, Length=412, Percent_Identity=39.5631067961165, Blast_Score=251, Evalue=1e-67, Organism=Drosophila melanogaster, GI24581203, Length=415, Percent_Identity=38.3132530120482, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI17136394, Length=411, Percent_Identity=38.4428223844282, Blast_Score=234, Evalue=8e-62,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41144; Mature: 41013
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIKMTDLDLAGKRVFIRSDLNVPVKDGKVTSDARIRASLPTIEDSLKQGARVMVTSHL CEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEEECC GRPTEGEYNAEFSLQPVVDYLENKLSAPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKK CCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC DDEALAKKYAALCDVFVMDAFGTAHRAQASTHGVGKFAAVACAGPLLFNELEALGKALDN HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLIS CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHHHEEEECCCCHHHHHHHHHHHH EAKRLLESSDIPVPTDVRVATEFSETATATLKSTSEIQDSEQILDLGDVSVARLAEILKN HHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCHHHHCCHHHHHCCCCCCHHHHHHHHHC AKTILWNGPVGVFEFANFRKGTEVVARAIADSEAFSIAGGGDTLAAIDLFGIADQISYIS CCEEEECCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHEE TGGGAFLEFVEGKKLPAVVMLEERAKQ CCCHHHHHHHCCCCCCEEEEEHHHCCC >Mature Secondary Structure AVIKMTDLDLAGKRVFIRSDLNVPVKDGKVTSDARIRASLPTIEDSLKQGARVMVTSHL EEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCEEEEEECC GRPTEGEYNAEFSLQPVVDYLENKLSAPVRLAKDYLDGVDVAEGELVVLENVRFNKGEKK CCCCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC DDEALAKKYAALCDVFVMDAFGTAHRAQASTHGVGKFAAVACAGPLLFNELEALGKALDN HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC PARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIANTFVAAQGHNVGKSLYEADLIS CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHHHEEEECCCCHHHHHHHHHHHH EAKRLLESSDIPVPTDVRVATEFSETATATLKSTSEIQDSEQILDLGDVSVARLAEILKN HHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHCHHHHCCHHHHHCCCCCCHHHHHHHHHC AKTILWNGPVGVFEFANFRKGTEVVARAIADSEAFSIAGGGDTLAAIDLFGIADQISYIS CCEEEECCCCCHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHHHEE TGGGAFLEFVEGKKLPAVVMLEERAKQ CCCHHHHHHHCCCCCCEEEEEHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA