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The map label for this gene is yqcA [C]

Identifier: 85059926

GI number: 85059926

Start: 3353831

End: 3354277

Strand: Reverse

Name: yqcA [C]

Synonym: SG1948

Alternate gene names: 85059926

Gene position: 3354277-3353831 (Counterclockwise)

Preceding gene: 85059927

Following gene: 85059921

Centisome position: 80.42

GC content: 58.17

Gene sequence:

>447_bases
ATGGCGCAGATAAGTATTTTTGTCGGTACGGTATATGGTAACGCGTTGTTGACCGCTGAAGAAGTGGAGTCGGTTCTGAC
AGAGCAGGGCCATCAGGTGACGCTGTTTGAGGATGGCGGCTTTGAGCAGTGGCAGGCGTATGCCGAACGGGTGATCCTCA
TTATTACTTCCACCACCGGACAGGGGGGATTGCCGGATAATATCGTACCGCTATTCCAGCAGGTGAAGGATAAGCTGGGG
CATCAGCCGGCGCTGCGCTATGGCGTTATTGCGCTGGGCGACAGCAGTTATGATACCTTTTGCGGCGCAGGGCACGCCTT
TGACGCGCTACTACAGGAGCAGGGGGTCACGCGGGTGGGCGATCTGCTGGAGATCGATGCCGTGGAGCATCCCGAGCCGG
AAACGCTGGCCTGTCGCTGGGCGGCGGAGTGGGGCGCATTGTTATAA

Upstream 100 bases:

>100_bases
CGCGGCCTTCTCCCTGCATATGAAAGGGTTGAGTTTGGCGGGCCTTCGGGTCAGGATAAGGCCCTTGATTACACGACGTA
GGTTTGGGGAGTCGAGCGCT

Downstream 100 bases:

>100_bases
GCGCTCACGCCGGGGCGGGGCTGTGCTATGCCGGTATGCATCGTGCTGTGGCGAGAGGGCAGCGCGGCAGTAGGCGTTGT
TACGGCGGGAGGGCGTCGGG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAQISIFVGTVYGNALLTAEEVESVLTEQGHQVTLFEDGGFEQWQAYAERVILIITSTTGQGGLPDNIVPLFQQVKDKLG
HQPALRYGVIALGDSSYDTFCGAGHAFDALLQEQGVTRVGDLLEIDAVEHPEPETLACRWAAEWGALL

Sequences:

>Translated_148_residues
MAQISIFVGTVYGNALLTAEEVESVLTEQGHQVTLFEDGGFEQWQAYAERVILIITSTTGQGGLPDNIVPLFQQVKDKLG
HQPALRYGVIALGDSSYDTFCGAGHAFDALLQEQGVTRVGDLLEIDAVEHPEPETLACRWAAEWGALL
>Mature_147_residues
AQISIFVGTVYGNALLTAEEVESVLTEQGHQVTLFEDGGFEQWQAYAERVILIITSTTGQGGLPDNIVPLFQQVKDKLGH
QPALRYGVIALGDSSYDTFCGAGHAFDALLQEQGVTRVGDLLEIDAVEHPEPETLACRWAAEWGALL

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1789154, Length=148, Percent_Identity=62.8378378378378, Blast_Score=199, Evalue=8e-53,
Organism=Escherichia coli, GI1790181, Length=148, Percent_Identity=33.1081081081081, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789123, Length=146, Percent_Identity=32.1917808219178, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 16046; Mature: 15915

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQISIFVGTVYGNALLTAEEVESVLTEQGHQVTLFEDGGFEQWQAYAERVILIITSTTG
CCEEEEEEEEECCCEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCEEEEEEEECCC
QGGLPDNIVPLFQQVKDKLGHQPALRYGVIALGDSSYDTFCGAGHAFDALLQEQGVTRVG
CCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHC
DLLEIDAVEHPEPETLACRWAAEWGALL
CEEEECCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
AQISIFVGTVYGNALLTAEEVESVLTEQGHQVTLFEDGGFEQWQAYAERVILIITSTTG
CEEEEEEEEECCCEEECHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCEEEEEEEECCC
QGGLPDNIVPLFQQVKDKLGHQPALRYGVIALGDSSYDTFCGAGHAFDALLQEQGVTRVG
CCCCCCHHHHHHHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHC
DLLEIDAVEHPEPETLACRWAAEWGALL
CEEEECCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA