| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059866
Identifier: 85059866
GI number: 85059866
Start: 3240761
End: 3242083
Strand: Reverse
Name: 85059866
Synonym: SG1888
Alternate gene names: NA
Gene position: 3242083-3240761 (Counterclockwise)
Preceding gene: 85059867
Following gene: 85059865
Centisome position: 77.73
GC content: 34.32
Gene sequence:
>1323_bases ATGATTATTGGCGTAATTAGTGATATACACCAGAATGGTAAGCGTGAGAATGATATACTTGAGGTGTCATTGAAAAATAT GGTAAATAATGGAGCCACAGCATTAATTATGGCCGGTGATATTGGTGATTATCATAGAGATAGAGAAAAGGCTCTTTCAA TTATAACAAATTGTTTCCCAAGTGATTTTCATAATCACATGATGCTTATGTTGGGTAATCACGATGTGAGAACAGGAGCT AAACCAGATCAATCTTTAGACCCGGATTTGGTTGGTTTATATCACAAACATTTAGATAAATTTGGCATTAAATACTATGA TAATATGATGTGTATTGATGCTTGGTTTAATGAATATCATGTTTTATGCTTGAATACCGATCTCGGTCTTAAAGATAAAA TGTATTTGAATGATAATTCAATAAGATGGCTAAAAGAAAAGTTAGCTGAAAATAGCGACATCCATAAACCAATTTTTGTT GTCACACATCAACCATTTAACTCCTCTCATTGGAGAGCAGGCCTCTTTGGTGGTTTCGGCGATCAGGATGAAATCCTAAA GGAATTATTCAACGAATATCCGCAAATCATCATGCTGAACGGCCATATACATAATGGTTTTGGAGTAATTGAATTTATTC AACGCCCTTTTGGTACACTGGTTGAAATTCCAAGTTTGACGAAAGGAGAAAATGGAGTTAAATCAGATGGTCCTGGTTGG TTAATAAAAACAAGTCGTGAATCACTAGTTTTTGAAGCATGGGATTTCTTTAACAACAAGAGATTAGACCAATATGACCA GACTATCAATCTCCCTCAATTATCGGTTTTGGCTAGAGAGCTAACTGAATTAGAGAGAAATGACCGAAATGACCTGTTGA CCAATGCGTCAATATTAATGAACAAAAAATATCTTAACGATATGCCTGATGGCAACAATACCGTTAAAGAACAAAATTAT TACAAAATTGATAAAATATATGATCAAAAAACCTGGCTTAAAATTGATGAATTACGGCATGAAATCATTGATTATTTAGA TGAAAAATCATTCCATACTTTTCCCATAATTAATGGAAAAGATATAACCGAAGAGGCGTTGCGCAACGCATTAAATGAAC AAAATCATATAATCATTAAGATGTATGATGGCGGATGGGCATCTAAAATTTTTATTCCTTCAGTTGTAGAAGAAAACAAA ATAATAAAAATTGCCACGAACGCAGGCTATCAGACACACGTCTATTACGATAACAAAGAGGTGGTTCTCAATAGAGGGGA TGCCTTGACGCTAACCACCAAAGTGATTTGGCATGAGTTATGA
Upstream 100 bases:
>100_bases AAAAATCATAAATAATATATATTGATAGTTATAATAATTATTATCGTTGTTAGACACACTCATAAAAGTTAAATGTAATT TATAGTAAAGGATATGTGAT
Downstream 100 bases:
>100_bases GCGTCTGATTATTAAGTCTTACTTGCTCCCAGCGCATCCAGCAGGGCATAAGACTTAAAGCGGATAACCTCCTGCCCCAG CCAGCCATTGAGGGAGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MIIGVISDIHQNGKRENDILEVSLKNMVNNGATALIMAGDIGDYHRDREKALSIITNCFPSDFHNHMMLMLGNHDVRTGA KPDQSLDPDLVGLYHKHLDKFGIKYYDNMMCIDAWFNEYHVLCLNTDLGLKDKMYLNDNSIRWLKEKLAENSDIHKPIFV VTHQPFNSSHWRAGLFGGFGDQDEILKELFNEYPQIIMLNGHIHNGFGVIEFIQRPFGTLVEIPSLTKGENGVKSDGPGW LIKTSRESLVFEAWDFFNNKRLDQYDQTINLPQLSVLARELTELERNDRNDLLTNASILMNKKYLNDMPDGNNTVKEQNY YKIDKIYDQKTWLKIDELRHEIIDYLDEKSFHTFPIINGKDITEEALRNALNEQNHIIIKMYDGGWASKIFIPSVVEENK IIKIATNAGYQTHVYYDNKEVVLNRGDALTLTTKVIWHEL
Sequences:
>Translated_440_residues MIIGVISDIHQNGKRENDILEVSLKNMVNNGATALIMAGDIGDYHRDREKALSIITNCFPSDFHNHMMLMLGNHDVRTGA KPDQSLDPDLVGLYHKHLDKFGIKYYDNMMCIDAWFNEYHVLCLNTDLGLKDKMYLNDNSIRWLKEKLAENSDIHKPIFV VTHQPFNSSHWRAGLFGGFGDQDEILKELFNEYPQIIMLNGHIHNGFGVIEFIQRPFGTLVEIPSLTKGENGVKSDGPGW LIKTSRESLVFEAWDFFNNKRLDQYDQTINLPQLSVLARELTELERNDRNDLLTNASILMNKKYLNDMPDGNNTVKEQNY YKIDKIYDQKTWLKIDELRHEIIDYLDEKSFHTFPIINGKDITEEALRNALNEQNHIIIKMYDGGWASKIFIPSVVEENK IIKIATNAGYQTHVYYDNKEVVLNRGDALTLTTKVIWHEL >Mature_440_residues MIIGVISDIHQNGKRENDILEVSLKNMVNNGATALIMAGDIGDYHRDREKALSIITNCFPSDFHNHMMLMLGNHDVRTGA KPDQSLDPDLVGLYHKHLDKFGIKYYDNMMCIDAWFNEYHVLCLNTDLGLKDKMYLNDNSIRWLKEKLAENSDIHKPIFV VTHQPFNSSHWRAGLFGGFGDQDEILKELFNEYPQIIMLNGHIHNGFGVIEFIQRPFGTLVEIPSLTKGENGVKSDGPGW LIKTSRESLVFEAWDFFNNKRLDQYDQTINLPQLSVLARELTELERNDRNDLLTNASILMNKKYLNDMPDGNNTVKEQNY YKIDKIYDQKTWLKIDELRHEIIDYLDEKSFHTFPIINGKDITEEALRNALNEQNHIIIKMYDGGWASKIFIPSVVEENK IIKIATNAGYQTHVYYDNKEVVLNRGDALTLTTKVIWHEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50878; Mature: 50878
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGVISDIHQNGKRENDILEVSLKNMVNNGATALIMAGDIGDYHRDREKALSIITNCFP CEEEEEHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC SDFHNHMMLMLGNHDVRTGAKPDQSLDPDLVGLYHKHLDKFGIKYYDNMMCIDAWFNEYH CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCEEEEEECCCCEE VLCLNTDLGLKDKMYLNDNSIRWLKEKLAENSDIHKPIFVVTHQPFNSSHWRAGLFGGFG EEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEECCCCCC DQDEILKELFNEYPQIIMLNGHIHNGFGVIEFIQRPFGTLVEIPSLTKGENGVKSDGPGW CHHHHHHHHHHCCCCEEEEECEEECCCHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCE LIKTSRESLVFEAWDFFNNKRLDQYDQTINLPQLSVLARELTELERNDRNDLLTNASILM EEEECCCHHEEHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHEE NKKYLNDMPDGNNTVKEQNYYKIDKIYDQKTWLKIDELRHEIIDYLDEKSFHTFPIINGK EHHHHCCCCCCCCCCCCCCCEEEHHHCCCHHHEEHHHHHHHHHHHHCCCCCCEEEEECCC DITEEALRNALNEQNHIIIKMYDGGWASKIFIPSVVEENKIIKIATNAGYQTHVYYDNKE CHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHCCCCCEEEEEECCCEEEEEEECCCE VVLNRGDALTLTTKVIWHEL EEEECCCEEEEEEEEHHCCC >Mature Secondary Structure MIIGVISDIHQNGKRENDILEVSLKNMVNNGATALIMAGDIGDYHRDREKALSIITNCFP CEEEEEHHHHHCCCCCCCEEEEEHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCC SDFHNHMMLMLGNHDVRTGAKPDQSLDPDLVGLYHKHLDKFGIKYYDNMMCIDAWFNEYH CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCEEEEEECCCCEE VLCLNTDLGLKDKMYLNDNSIRWLKEKLAENSDIHKPIFVVTHQPFNSSHWRAGLFGGFG EEEEECCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCEECCCCCC DQDEILKELFNEYPQIIMLNGHIHNGFGVIEFIQRPFGTLVEIPSLTKGENGVKSDGPGW CHHHHHHHHHHCCCCEEEEECEEECCCHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCE LIKTSRESLVFEAWDFFNNKRLDQYDQTINLPQLSVLARELTELERNDRNDLLTNASILM EEEECCCHHEEHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCHHHEE NKKYLNDMPDGNNTVKEQNYYKIDKIYDQKTWLKIDELRHEIIDYLDEKSFHTFPIINGK EHHHHCCCCCCCCCCCCCCCEEEHHHCCCHHHEEHHHHHHHHHHHHCCCCCCEEEEECCC DITEEALRNALNEQNHIIIKMYDGGWASKIFIPSVVEENKIIKIATNAGYQTHVYYDNKE CHHHHHHHHHCCCCCEEEEEEECCCCCCEEECCHHCCCCCEEEEEECCCEEEEEEECCCE VVLNRGDALTLTTKVIWHEL EEEECCCEEEEEEEEHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA