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The map label for this gene is lysR [C]

Identifier: 85059845

GI number: 85059845

Start: 3199054

End: 3199713

Strand: Reverse

Name: lysR [C]

Synonym: SG1867

Alternate gene names: 85059845

Gene position: 3199713-3199054 (Counterclockwise)

Preceding gene: 85059846

Following gene: 85059843

Centisome position: 76.71

GC content: 62.42

Gene sequence:

>660_bases
GTGCTGGCCCATGCCGAACAGCAACTCGGTTTCGCCTTGTTCGACAGGCTGCCTTCCAGCCTGCAGCCCACGCCGCGGGC
ACAGCGGCTAATGCCGGAAATCGAACAGCTTTATCTGCATTTGCAGCGTATCGACCAGCTTGCCCAGCGTTTGCGCGAAC
CGCAGCCGCAGCAGTTGCGCATCGGCGCTGCGCATGCGATGGGTCAAGTTTTTATGGCGCAGGTACTGATGGACTACCGT
CGTCTGGCGCCGCCGCTGTCGGCGGAGGTAGAATTGGTGACCGGTCATCAGGATACCCTATGCCAGGATCTGCTGGCTGA
ACGGCTGGATCTGGTGCTGGCGTTTGGTCAATCGGTGGCGCCGGGCCTGACGGCAGAAGTGCCTTATCGTGCCGATATGG
TGCTAGCCGGCGGCGGTGTGGGGATTGTCGATACGTTTACCGCCAGCCGCTACGCCGCGCAGTTGCAGGTGGTCGCAATC
CAGGAGGCGCTGCCGTTTGAGGTGCAGTGGCTGACAACCGCGTCTCAGGCCGCCGAACCAGCGGTGTTGCTGATGCGCAG
CATCATTAGCCGGCAACGGGAACCGTGGCGTGATGCGTTGCATTGTGCTCGGACACGGGACGTGAGGGCAGGCTGGTGGC
AGCCTTCCCGTGGGATGTAA

Upstream 100 bases:

>100_bases
ACCATGCGGTTACGTCATATCGAAATCATTCACGCCATCATGGCGTCCGGCAGTATCAGCGGCGCGCCGGCTTAATGTCT
CGCAGCCCAACATCAGCCGC

Downstream 100 bases:

>100_bases
GCCCCGGCATGACGCACAGGCAAGATATCGCGGCAACGTGCCGGCGCACGGCTGTCCACGCCTCGGCTGTGTGCTATTTC
CAGAAATCGTCAAAGACCGT

Product: hypothetical protein

Products: NA

Alternate protein names: LysR-Family Transcriptional Regulator; Transcriptional Regulator; LysR Family Transcriptional Regulator; RuBisCO Transcriptional Regulator

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MLAHAEQQLGFALFDRLPSSLQPTPRAQRLMPEIEQLYLHLQRIDQLAQRLREPQPQQLRIGAAHAMGQVFMAQVLMDYR
RLAPPLSAEVELVTGHQDTLCQDLLAERLDLVLAFGQSVAPGLTAEVPYRADMVLAGGGVGIVDTFTASRYAAQLQVVAI
QEALPFEVQWLTTASQAAEPAVLLMRSIISRQREPWRDALHCARTRDVRAGWWQPSRGM

Sequences:

>Translated_219_residues
MLAHAEQQLGFALFDRLPSSLQPTPRAQRLMPEIEQLYLHLQRIDQLAQRLREPQPQQLRIGAAHAMGQVFMAQVLMDYR
RLAPPLSAEVELVTGHQDTLCQDLLAERLDLVLAFGQSVAPGLTAEVPYRADMVLAGGGVGIVDTFTASRYAAQLQVVAI
QEALPFEVQWLTTASQAAEPAVLLMRSIISRQREPWRDALHCARTRDVRAGWWQPSRGM
>Mature_219_residues
MLAHAEQQLGFALFDRLPSSLQPTPRAQRLMPEIEQLYLHLQRIDQLAQRLREPQPQQLRIGAAHAMGQVFMAQVLMDYR
RLAPPLSAEVELVTGHQDTLCQDLLAERLDLVLAFGQSVAPGLTAEVPYRADMVLAGGGVGIVDTFTASRYAAQLQVVAI
QEALPFEVQWLTTASQAAEPAVLLMRSIISRQREPWRDALHCARTRDVRAGWWQPSRGM

Specific function: This Protein Activates The Transcription Of The Lysa Gene Encoding Diaminopimelate Decarboxylase. Lysr Is Also A Negative Regulator Of Its Own Expression. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24485; Mature: 24485

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAHAEQQLGFALFDRLPSSLQPTPRAQRLMPEIEQLYLHLQRIDQLAQRLREPQPQQLR
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IGAAHAMGQVFMAQVLMDYRRLAPPLSAEVELVTGHQDTLCQDLLAERLDLVLAFGQSVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
PGLTAEVPYRADMVLAGGGVGIVDTFTASRYAAQLQVVAIQEALPFEVQWLTTASQAAEP
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEHHHHHHCCH
AVLLMRSIISRQREPWRDALHCARTRDVRAGWWQPSRGM
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAHAEQQLGFALFDRLPSSLQPTPRAQRLMPEIEQLYLHLQRIDQLAQRLREPQPQQLR
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IGAAHAMGQVFMAQVLMDYRRLAPPLSAEVELVTGHQDTLCQDLLAERLDLVLAFGQSVA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCC
PGLTAEVPYRADMVLAGGGVGIVDTFTASRYAAQLQVVAIQEALPFEVQWLTTASQAAEP
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEEHHHCCCCEEEEEHHHHHHCCH
AVLLMRSIISRQREPWRDALHCARTRDVRAGWWQPSRGM
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA