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The map label for this gene is zntR [H]

Identifier: 85059830

GI number: 85059830

Start: 3143559

End: 3144038

Strand: Reverse

Name: zntR [H]

Synonym: SG1852

Alternate gene names: 85059830

Gene position: 3144038-3143559 (Counterclockwise)

Preceding gene: 85059832

Following gene: 85059826

Centisome position: 75.38

GC content: 62.08

Gene sequence:

>480_bases
ATGAAAATCGGCGAATTGGCCCGTCAGGGCGGCTGCCCGATAGAGACGGTGCGTTATTACGAGCGGGAGCAACTGCTGCC
GGCGGCACTACGCGACCAGAACAACAACTACCGCCACTATGACAAGCGCCACCTGGAGCAGTTGGTCTTTATCCGTCGCT
GCCATTCGCTGGAGATGACCCATGACGAAATCCGCGAACTGTTGGCGGCACGCCAGGAGCCTGATGCCAGCTGTAGCGCA
ATCGATGGTTTGATTGAGGCGCATTTGGAGCACGTCCGCACCCGCATGGCGGAGCTACAGGCGCTGGAGGCGGAGCTTAA
CGATTTGCGCGGCCGCTGCGATGCCGCGCGCGCGACGCATCATTGCGGCATTTTGCATGAGCTTGATCATAAAGCGCCGC
CGACGCGGGAGCAGACCGCAGCGCACGGCAGTCATGTCGCTGGCCGCCTGCATGGCACCGACGTCAGCGGCAGCGCTTGA

Upstream 100 bases:

>100_bases
GTTGCCGTTCATGGTGGCAGTCTCCCGATGGCTTGTCGTTAGTTGTCAATTTAACACCCTGAAGCTACTATAGGGTCAAG
AGAGTATTGAGGAGATCGGA

Downstream 100 bases:

>100_bases
GCGGCCGCACAGCACACGCCGCCCGACATCAGGGTGATCTGGCCCGTGGCAACCTTCTTTCCTTTTCCATTCGAGGCCAT
ACCATGACGGATAAAAAGCC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKIGELARQGGCPIETVRYYEREQLLPAALRDQNNNYRHYDKRHLEQLVFIRRCHSLEMTHDEIRELLAARQEPDASCSA
IDGLIEAHLEHVRTRMAELQALEAELNDLRGRCDAARATHHCGILHELDHKAPPTREQTAAHGSHVAGRLHGTDVSGSA

Sequences:

>Translated_159_residues
MKIGELARQGGCPIETVRYYEREQLLPAALRDQNNNYRHYDKRHLEQLVFIRRCHSLEMTHDEIRELLAARQEPDASCSA
IDGLIEAHLEHVRTRMAELQALEAELNDLRGRCDAARATHHCGILHELDHKAPPTREQTAAHGSHVAGRLHGTDVSGSA
>Mature_159_residues
MKIGELARQGGCPIETVRYYEREQLLPAALRDQNNNYRHYDKRHLEQLVFIRRCHSLEMTHDEIRELLAARQEPDASCSA
IDGLIEAHLEHVRTRMAELQALEAELNDLRGRCDAARATHHCGILHELDHKAPPTREQTAAHGSHVAGRLHGTDVSGSA

Specific function: Transcriptional regulator [H]

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789687, Length=137, Percent_Identity=32.8467153284672, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR015358 [H]

Pfam domain/function: PF00376 MerR; PF09278 MerR-DNA-bind [H]

EC number: NA

Molecular weight: Translated: 17966; Mature: 17966

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGELARQGGCPIETVRYYEREQLLPAALRDQNNNYRHYDKRHLEQLVFIRRCHSLEMT
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
HDEIRELLAARQEPDASCSAIDGLIEAHLEHVRTRMAELQALEAELNDLRGRCDAARATH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCGILHELDHKAPPTREQTAAHGSHVAGRLHGTDVSGSA
HHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKIGELARQGGCPIETVRYYEREQLLPAALRDQNNNYRHYDKRHLEQLVFIRRCHSLEMT
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
HDEIRELLAARQEPDASCSAIDGLIEAHLEHVRTRMAELQALEAELNDLRGRCDAARATH
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HCGILHELDHKAPPTREQTAAHGSHVAGRLHGTDVSGSA
HHHHHHHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]