| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059824
Identifier: 85059824
GI number: 85059824
Start: 3136716
End: 3137207
Strand: Reverse
Name: 85059824
Synonym: SG1846
Alternate gene names: NA
Gene position: 3137207-3136716 (Counterclockwise)
Preceding gene: 85059825
Following gene: 85059823
Centisome position: 75.21
GC content: 53.66
Gene sequence:
>492_bases ATGGCCTCCACCTGTAGCTTTTTCTCTTTTCCTCGTTTGTCGCTTATGGTCGGGATGACATGGAAAACGTGGCGCCGGCG GATTTTTAAGCGTTCCGAGACGTATTTGTTTGAACTATATCGCTTGCGAGCGCCCACTAATTTCACAGAAACCGCTTTTT ATACTAGCCTGTATATATACATCACTCATGAGGAGGTAGCGATGAATGAACGTCCTTCTAACCTGGCGAATAACGGACAT CGGGTCCTGCTGGAGACCCTCTACTATGGCGAAACAAAAGCCACCTATTTGATGCGCGCCTGCGAGGCGATCGCTACCTG CGGCATCCGCGCCGGTGCTCTACTGGTGATCGACCCGGCGGCAAAGCCGCGGGACGGCAGTATTGTGGTCATCCAGATTG GCGAAGATCTCTCTTTGCGGTGGCTGCGCGGCTGCGGCCGGAAAAATATCTGGAAAATCTCGACGCGCCCGGACGACATC CTGCTGTGGTAG
Upstream 100 bases:
>100_bases CCCCGCCAGCCGGCAATTGTTTGCAGTTGCCCCTTATTCTTCGCACCGTCCCCGGTGGCCTTTCGCCTATCCTCTGCCGT CTGAAGTCTGAGACTTCCCT
Downstream 100 bases:
>100_bases GACGACGATACCGCACCAAGCGGCATTATCTTTTGGGGAATGTTGATCTATATAGTGAACGGCGAGTCGACACAATAGTC AAATAATCATAATCAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MASTCSFFSFPRLSLMVGMTWKTWRRRIFKRSETYLFELYRLRAPTNFTETAFYTSLYIYITHEEVAMNERPSNLANNGH RVLLETLYYGETKATYLMRACEAIATCGIRAGALLVIDPAAKPRDGSIVVIQIGEDLSLRWLRGCGRKNIWKISTRPDDI LLW
Sequences:
>Translated_163_residues MASTCSFFSFPRLSLMVGMTWKTWRRRIFKRSETYLFELYRLRAPTNFTETAFYTSLYIYITHEEVAMNERPSNLANNGH RVLLETLYYGETKATYLMRACEAIATCGIRAGALLVIDPAAKPRDGSIVVIQIGEDLSLRWLRGCGRKNIWKISTRPDDI LLW >Mature_162_residues ASTCSFFSFPRLSLMVGMTWKTWRRRIFKRSETYLFELYRLRAPTNFTETAFYTSLYIYITHEEVAMNERPSNLANNGHR VLLETLYYGETKATYLMRACEAIATCGIRAGALLVIDPAAKPRDGSIVVIQIGEDLSLRWLRGCGRKNIWKISTRPDDIL LW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18871; Mature: 18740
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTCSFFSFPRLSLMVGMTWKTWRRRIFKRSETYLFELYRLRAPTNFTETAFYTSLYIY CCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHEEEEEEEEE ITHEEVAMNERPSNLANNGHRVLLETLYYGETKATYLMRACEAIATCGIRAGALLVIDPA EEECHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC AKPRDGSIVVIQIGEDLSLRWLRGCGRKNIWKISTRPDDILLW CCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEECCCCCCEEEC >Mature Secondary Structure ASTCSFFSFPRLSLMVGMTWKTWRRRIFKRSETYLFELYRLRAPTNFTETAFYTSLYIY CCCCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHEEEEEEEEE ITHEEVAMNERPSNLANNGHRVLLETLYYGETKATYLMRACEAIATCGIRAGALLVIDPA EEECHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCC AKPRDGSIVVIQIGEDLSLRWLRGCGRKNIWKISTRPDDILLW CCCCCCCEEEEEECCCCCHHHHHCCCCCCEEEECCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA