| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85059801
Identifier: 85059801
GI number: 85059801
Start: 3091052
End: 3091792
Strand: Reverse
Name: 85059801
Synonym: SG1823
Alternate gene names: NA
Gene position: 3091792-3091052 (Counterclockwise)
Preceding gene: 85059802
Following gene: 85059800
Centisome position: 74.12
GC content: 47.23
Gene sequence:
>741_bases TTGGGCCACTCATGTCTGCGAGGCAGGCTCTATCACCAAAAGGAAATAGTGATGCAATTAGTGGAAATAAAGAAATTTGA TCTTGTAGCGAATACTATGGCGATTGCTGAGGGTGTTGAGAAAGATCATGACACCATTATCAAGCTTGTTGACCGTAACA AAGCTGATCTGGAAGAGTTTGGGCCACTCGTATTTGAAATCCGTATGGTTGAGAGAAGCCAAGGCGGTGGCAAGCCTCTT CGTGTTGCATTTCTCAACGAGCAGCAAACTACACTCTTAATTACCTACATGCGCAACAATGATGCTGTTCGTGTATTCAA GAAGAAGCGGGTTTCCGAGTTCTTCCGTATGCGCAATGCATTGGCGGGCAAGAAGATGGATCGCAATACCGCCCGGATTG AGTACCGCCCAATGACCGATGCCATCAAACACGAACGCGAAGCTCAGGGGAAAACCATCGCGCCACACCATTTCAGTAAC GAGGCTGATTTAATAAACCGCATTGCACTTGGTATGACATCTGCAAAATTTCGTGTCCACCATGAAATAGGCAAGAAAGA ATCTATCCGTGACTATCTGACGCCAGAGCAGATCCACTGCATTACCGAACTGCAACGCGCCAATACGGTATTTATTGGCA TGGGCTGGGACTTCGAGCAACGCAAGGCCACGCTGATGGGAATATTCAACAAAAACCATCGTCAGCCATTGATTGAAGAA CAGCACCGACTGGCAGCATGA
Upstream 100 bases:
>100_bases CCGGGGCTTTTTTTCGCCTGCGCATCCTCGTGCGCATACAACCAAGAGTCTTTCGGGATATGAGCCTGAGACAGAGTGGC GGTTTCATCGCTAACCCCTC
Downstream 100 bases:
>100_bases TGCGCTGGAAACTCCTCACGCTCGCCGCAATGCTGCTCACTATGACAGCTCTCGCTATAGTGGTTAGAATTCAGAGCCTC GACATCACCACCCGCCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: AntA/AntB Antirepressor Domain-Containing Protein; Phage Protein By Glimmer/Critica; Phage-Like Protein; Rha Family Phage Regulatory Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MGHSCLRGRLYHQKEIVMQLVEIKKFDLVANTMAIAEGVEKDHDTIIKLVDRNKADLEEFGPLVFEIRMVERSQGGGKPL RVAFLNEQQTTLLITYMRNNDAVRVFKKKRVSEFFRMRNALAGKKMDRNTARIEYRPMTDAIKHEREAQGKTIAPHHFSN EADLINRIALGMTSAKFRVHHEIGKKESIRDYLTPEQIHCITELQRANTVFIGMGWDFEQRKATLMGIFNKNHRQPLIEE QHRLAA
Sequences:
>Translated_246_residues MGHSCLRGRLYHQKEIVMQLVEIKKFDLVANTMAIAEGVEKDHDTIIKLVDRNKADLEEFGPLVFEIRMVERSQGGGKPL RVAFLNEQQTTLLITYMRNNDAVRVFKKKRVSEFFRMRNALAGKKMDRNTARIEYRPMTDAIKHEREAQGKTIAPHHFSN EADLINRIALGMTSAKFRVHHEIGKKESIRDYLTPEQIHCITELQRANTVFIGMGWDFEQRKATLMGIFNKNHRQPLIEE QHRLAA >Mature_245_residues GHSCLRGRLYHQKEIVMQLVEIKKFDLVANTMAIAEGVEKDHDTIIKLVDRNKADLEEFGPLVFEIRMVERSQGGGKPLR VAFLNEQQTTLLITYMRNNDAVRVFKKKRVSEFFRMRNALAGKKMDRNTARIEYRPMTDAIKHEREAQGKTIAPHHFSNE ADLINRIALGMTSAKFRVHHEIGKKESIRDYLTPEQIHCITELQRANTVFIGMGWDFEQRKATLMGIFNKNHRQPLIEEQ HRLAA
Specific function: Unknown
COG id: COG3646
COG function: function code S; Uncharacterized phage-encoded protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28567; Mature: 28435
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSCLRGRLYHQKEIVMQLVEIKKFDLVANTMAIAEGVEKDHDTIIKLVDRNKADLEEF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH GPLVFEIRMVERSQGGGKPLRVAFLNEQQTTLLITYMRNNDAVRVFKKKRVSEFFRMRNA CCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH LAGKKMDRNTARIEYRPMTDAIKHEREAQGKTIAPHHFSNEADLINRIALGMTSAKFRVH HHCCCCCCCCEEEEEECCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCHHHEEHH HEIGKKESIRDYLTPEQIHCITELQRANTVFIGMGWDFEQRKATLMGIFNKNHRQPLIEE HHHCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHH QHRLAA HHHCCC >Mature Secondary Structure GHSCLRGRLYHQKEIVMQLVEIKKFDLVANTMAIAEGVEKDHDTIIKLVDRNKADLEEF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHH GPLVFEIRMVERSQGGGKPLRVAFLNEQQTTLLITYMRNNDAVRVFKKKRVSEFFRMRNA CCEEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH LAGKKMDRNTARIEYRPMTDAIKHEREAQGKTIAPHHFSNEADLINRIALGMTSAKFRVH HHCCCCCCCCEEEEEECCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCHHHEEHH HEIGKKESIRDYLTPEQIHCITELQRANTVFIGMGWDFEQRKATLMGIFNKNHRQPLIEE HHHCCHHHHHHHCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCCCCCHHHH QHRLAA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA