Click here to switch to the map view.

The map label for this gene is 85059798

Identifier: 85059798

GI number: 85059798

Start: 3088695

End: 3090146

Strand: Reverse

Name: 85059798

Synonym: SG1820

Alternate gene names: NA

Gene position: 3090146-3088695 (Counterclockwise)

Preceding gene: 85059799

Following gene: 85059797

Centisome position: 74.08

GC content: 49.79

Gene sequence:

>1452_bases
ATGACGACTCTTAATGCTATTTTCCGTCCATTTATTCAGCCACATCGCTACAAGATTGCCAAAGGTGGGCGGGGAAGCGG
TAAATCATGGGCTATCGCACGGTTACTGGTAGAAATAGCGCGACGAGGCACTTATCGCTTTCTTTGCGCACGTGAGTTCC
AGGCCAGTATGGCCGATTCTGTTATCCAGTTGATTGCAGACACTATCCAGCGCGAAGGTTATCTGAAGGAGTTCGAGATT
CAGAAAGCGTATATCCGCCATCTTGCCACCGATAGCCTGTTTATGTTTTACGGTATAAAAAATAACGTTACCAAAATTAA
ATCGCTGGAAGGCATTGATATTGCGTGGGTAGAAGAAGCTGAAGCGGTGACCAAGGAGAGCTGGGATATTCTTATCCCCA
CTATCCGCAAACCGGGCAGTGAAATCTGGGTTAGCTTTAATCCGAAGAATATCCTCGACGACACCTATCAACGCTTTGTT
GTCAATCCACTGGATGATATCTGCCTGCTGACGGTGCATTACACCGACAATCCCCATTTCCCTGAAGTACTCCGCCTGGA
AATGGAGGAATGCAAGTGCAAGGACTATGACCTGTATCTGCATATCTGGGAAGGGGAGCCGGTCGCGGACAGCGACCTGG
CGATTATCAAGCCGTTGTGGATTGCTGCGGCGGTCGATGCGCATATGACGCTGGGATTTGACGCTGTGGGAGAAAAGCGT
CTCGGCTTCGACGTTGCTGATGAAGGTGAAGACTGCAACGCCTTGTGCTTTGTGCAGGGCTCAGTCGTGCTAGACCTTGA
TGAATGGCATCGAGGCGATGTGATTGCTTCCTCCAATCGGGTTAATCGCTACGCGATAGAGCGTGGCATCACCTGCATTA
TCTACGACTCTATCGGTGTAGGCGCTGGCGTCAAGGCACACCTGAAGCGGATAGCCGCCATCAACGTTAAAGGGTTTAAC
GCCGGTGAAGCGGTCAAAGATCCTGATGCACTGTATATGCCGGGAAAAACAAATAAAGATATGTTCGCCAACATTAAGGC
ACAGGCGTGGTGGGCGGTACGAGAGCGATTCTATAAAACATGGCGCTGCATTGAGGCCAAAAAACAGGATCCCAAAGCGG
CATTGCTCTACCCAACAGATGAACTCATCAGCCTGTCAACGACGAACATCAAAAGACTGGAATACCTGAAGGCGGAATTA
TCCCGGCCTCGGGTGGATTACGACAATAACGGACACGTCAAGGTTGAGAGTAAAAAAGACATGAAAAAAGAGGCATTCCC
TCACCGAATATGGCGGATGCGCTCATTATGGCTTTTGCGCCGACAGATCGCGCCTTGGATACATGGGCATTGCTGGGGAG
AAAGGCTTAAATGTCACGAAAACGCCATGCCCGCCATCAGGCGAAAAATCATGCCATCAGGCAACACACCGTGGATGGTT
ACGAAAACTTAA

Upstream 100 bases:

>100_bases
ATGCTGACCAAACATGGCTACTCGGATAAGCAGGAACTGACCGGTAAAGACGGCGGCGCACTTCAGGTAGAGACCAAACC
ACTCTCCTCACTATTTCATG

Downstream 100 bases:

>100_bases
CGGCGCGTCTGGGGATAAGAGCCCCCAATCTCAGCAGTGACGGCACGTATTTTCCCAGTTTCACCTCACGTAACCGGACG
TTGGTGGAATTTGCCTATCG

Product: phage terminase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTTLNAIFRPFIQPHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADSVIQLIADTIQREGYLKEFEI
QKAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWVEEAEAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFV
VNPLDDICLLTVHYTDNPHFPEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHMTLGFDAVGEKR
LGFDVADEGEDCNALCFVQGSVVLDLDEWHRGDVIASSNRVNRYAIERGITCIIYDSIGVGAGVKAHLKRIAAINVKGFN
AGEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKTWRCIEAKKQDPKAALLYPTDELISLSTTNIKRLEYLKAEL
SRPRVDYDNNGHVKVESKKDMKKEAFPHRIWRMRSLWLLRRQIAPWIHGHCWGERLKCHENAMPAIRRKIMPSGNTPWMV
TKT

Sequences:

>Translated_483_residues
MTTLNAIFRPFIQPHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADSVIQLIADTIQREGYLKEFEI
QKAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWVEEAEAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFV
VNPLDDICLLTVHYTDNPHFPEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHMTLGFDAVGEKR
LGFDVADEGEDCNALCFVQGSVVLDLDEWHRGDVIASSNRVNRYAIERGITCIIYDSIGVGAGVKAHLKRIAAINVKGFN
AGEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKTWRCIEAKKQDPKAALLYPTDELISLSTTNIKRLEYLKAEL
SRPRVDYDNNGHVKVESKKDMKKEAFPHRIWRMRSLWLLRRQIAPWIHGHCWGERLKCHENAMPAIRRKIMPSGNTPWMV
TKT
>Mature_482_residues
TTLNAIFRPFIQPHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADSVIQLIADTIQREGYLKEFEIQ
KAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWVEEAEAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFVV
NPLDDICLLTVHYTDNPHFPEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHMTLGFDAVGEKRL
GFDVADEGEDCNALCFVQGSVVLDLDEWHRGDVIASSNRVNRYAIERGITCIIYDSIGVGAGVKAHLKRIAAINVKGFNA
GEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKTWRCIEAKKQDPKAALLYPTDELISLSTTNIKRLEYLKAELS
RPRVDYDNNGHVKVESKKDMKKEAFPHRIWRMRSLWLLRRQIAPWIHGHCWGERLKCHENAMPAIRRKIMPSGNTPWMVT
KT

Specific function: Unknown

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 55421; Mature: 55289

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLNAIFRPFIQPHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADS
CCCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VIQLIADTIQREGYLKEFEIQKAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWVEEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECHH
EAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFVVNPLDDICLLTVHYTDNPHF
HHHHHCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHMTLGFDAVGEKR
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCHHCCCCC
LGFDVADEGEDCNALCFVQGSVVLDLDEWHRGDVIASSNRVNRYAIERGITCIIYDSIGV
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEECCCCCHHHHHHHCCEEEEEECCCC
GAGVKAHLKRIAAINVKGFNAGEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKT
CCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHH
WRCIEAKKQDPKAALLYPTDELISLSTTNIKRLEYLKAELSRPRVDYDNNGHVKVESKKD
HHHHHHCCCCCCEEEEECCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECHHH
MKKEAFPHRIWRMRSLWLLRRQIAPWIHGHCWGERLKCHENAMPAIRRKIMPSGNTPWMV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
TKT
EEC
>Mature Secondary Structure 
TTLNAIFRPFIQPHRYKIAKGGRGSGKSWAIARLLVEIARRGTYRFLCAREFQASMADS
CCHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
VIQLIADTIQREGYLKEFEIQKAYIRHLATDSLFMFYGIKNNVTKIKSLEGIDIAWVEEA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECHH
EAVTKESWDILIPTIRKPGSEIWVSFNPKNILDDTYQRFVVNPLDDICLLTVHYTDNPHF
HHHHHCCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCC
PEVLRLEMEECKCKDYDLYLHIWEGEPVADSDLAIIKPLWIAAAVDAHMTLGFDAVGEKR
HHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEECCHHCCCCC
LGFDVADEGEDCNALCFVQGSVVLDLDEWHRGDVIASSNRVNRYAIERGITCIIYDSIGV
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEECCCCCHHHHHHHCCEEEEEECCCC
GAGVKAHLKRIAAINVKGFNAGEAVKDPDALYMPGKTNKDMFANIKAQAWWAVRERFYKT
CCCHHHHHHHHHEEEECCCCCCCCCCCCCCEEECCCCCCCCEEECHHHHHHHHHHHHHHH
WRCIEAKKQDPKAALLYPTDELISLSTTNIKRLEYLKAELSRPRVDYDNNGHVKVESKKD
HHHHHHCCCCCCEEEEECCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECHHH
MKKEAFPHRIWRMRSLWLLRRQIAPWIHGHCWGERLKCHENAMPAIRRKIMPSGNTPWMV
HHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCEEE
TKT
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]